EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000016968 (Gene tree)
Gene ID: 109958291
Gene Symbol: opa1
Alias: fk62d06|wu:fb77a10|wu:fk62d06|zgc:92092
Full Name: OPA1%2C mitochondrial dynamin like GTPase
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 43147 bases
Position: chrKV884719.1:3226548-3269694
Accession: 109958291
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000024404	MMR_HSR1	PF01926.23	2.5e-05	1	1
ENSMALP00000024478	MMR_HSR1	PF01926.23	2.6e-05	1	1
ENSMALP00000024436	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000024866	-	8337	XM_020596826	ENSMALP00000024404	1030 (aa)	XP_020452482	UPI0009B321BD
ENSMALT00000024940	-	8199	XM_020596828	ENSMALP00000024478	984 (aa)	XP_020452484	UPI0009B3C6FA
ENSMALT00000024898	-	8283	XM_020596827	ENSMALP00000024436	1012 (aa)	XP_020452483	UPI0009B3623D

Gene Model

Click here to download ENSMALG00000016968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000016968's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000016968	opa1	100	94.309	ENSAPOG00000011980	opa1	100	94.309	Acanthochromis_polyacanthus
ENSMALG00000016968	opa1	97	89.215	ENSACIG00000012521	opa1	97	95.748	Amphilophus_citrinellus
ENSMALG00000016968	opa1	100	94.004	ENSAOCG00000020559	opa1	100	94.004	Amphiprion_ocellaris
ENSMALG00000016968	opa1	100	93.902	ENSAPEG00000001641	opa1	100	93.902	Amphiprion_percula
ENSMALG00000016968	opa1	100	89.148	ENSAMXG00000012295	opa1	100	93.315	Astyanax_mexicanus
ENSMALG00000016968	opa1	92	51.758	WBGene00001134	eat-3	90	52.494	Caenorhabditis_elegans
ENSMALG00000016968	opa1	93	87.636	ENSCSEG00000014266	opa1	96	87.636	Cynoglossus_semilaevis
ENSMALG00000016968	opa1	100	92.345	ENSCVAG00000002438	opa1	100	92.248	Cyprinodon_variegatus
ENSMALG00000016968	opa1	100	87.627	ENSDARG00000070801	opa1	100	87.627	Danio_rerio
ENSMALG00000016968	opa1	97	53.167	FBgn0261276	Opa1	90	55.543	Drosophila_melanogaster
ENSMALG00000016968	opa1	88	94.891	ENSFHEG00000003616	opa1	97	94.891	Fundulus_heteroclitus
ENSMALG00000016968	opa1	100	91.565	ENSGACG00000009278	opa1	100	91.565	Gasterosteus_aculeatus
ENSMALG00000016968	opa1	98	92.324	ENSHBUG00000005897	opa1	100	92.324	Haplochromis_burtoni
ENSMALG00000016968	opa1	100	91.870	ENSHCOG00000016756	opa1	99	94.947	Hippocampus_comes
ENSMALG00000016968	opa1	76	93.467	ENSKMAG00000009415	opa1	96	93.467	Kryptolebias_marmoratus
ENSMALG00000016968	opa1	97	85.819	ENSMMOG00000008891	opa1	95	91.667	Mola_mola
ENSMALG00000016968	opa1	97	88.924	ENSNBRG00000020394	opa1	98	95.610	Neolamprologus_brichardi
ENSMALG00000016968	opa1	100	83.537	ENSPKIG00000003379	opa1	100	83.537	Paramormyrops_kingsleyae
ENSMALG00000016968	opa1	100	76.406	ENSPKIG00000006473	OPA1	99	76.506	Paramormyrops_kingsleyae
ENSMALG00000016968	opa1	97	89.017	ENSPNYG00000021747	opa1	97	95.473	Pundamilia_nyererei
ENSMALG00000016968	opa1	100	89.959	ENSPNAG00000001917	opa1	98	94.407	Pygocentrus_nattereri
ENSMALG00000016968	opa1	97	80.457	ENSSFOG00015009303	OPA1	97	80.353	Scleropages_formosus
ENSMALG00000016968	opa1	97	86.961	ENSSMAG00000001797	opa1	97	93.733	Scophthalmus_maximus
ENSMALG00000016968	opa1	69	93.350	ENSSDUG00000004968	opa1	99	93.350	Seriola_dumerili
ENSMALG00000016968	opa1	100	92.954	ENSSLDG00000011089	opa1	100	92.664	Seriola_lalandi_dorsalis
ENSMALG00000016968	opa1	100	94.106	ENSSPAG00000018388	opa1	100	94.106	Stegastes_partitus
ENSMALG00000016968	opa1	79	88.760	ENSXCOG00000003267	opa1	92	88.760	Xiphophorus_couchianus
ENSMALG00000016968	opa1	76	93.826	ENSXMAG00000005593	opa1	99	94.580	Xiphophorus_maculatus