EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000017129 (Gene tree)
Gene ID: 109972077
Gene Symbol: -
Alias: sfrs1a|sfrs1l|wu:fb52g10|wu:fb97g12|zgc:66146
Full Name: serine/arginine-rich splicing factor 1-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 3112 bases
Position: chrKV884934.1:1051431-1054542
Accession: 109972077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000024597	RRM_1	PF00076.22	3.3e-32	1	2
ENSMALP00000024597	RRM_1	PF00076.22	3.3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000025060	-	1153	XM_020620713	ENSMALP00000024597	255 (aa)	XP_020476369	-

Gene Model

Click here to download ENSMALG00000017129's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG
malb05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000017129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000017129	-	62	42.857	ENSMALG00000021875	srsf5b	82	44.275
ENSMALG00000017129	-	64	46.061	ENSMALG00000021194	srsf5a	58	46.061
ENSMALG00000017129	-	78	79.293	ENSMALG00000007763	-	77	82.199
ENSMALG00000017129	-	64	47.590	ENSMALG00000013392	srsf4	61	45.783
ENSMALG00000017129	-	69	67.797	ENSMALG00000011678	srsf9	74	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000017129	-	75	88.601	ENSG00000136450	SRSF1	95	91.935	Homo_sapiens
ENSMALG00000017129	-	75	89.005	ENSAPOG00000008542	-	80	87.940	Acanthochromis_polyacanthus
ENSMALG00000017129	-	76	98.964	ENSAPOG00000002748	-	79	98.964	Acanthochromis_polyacanthus
ENSMALG00000017129	-	75	88.482	ENSAMEG00000002635	SRSF1	77	89.529	Ailuropoda_melanoleuca
ENSMALG00000017129	-	76	98.446	ENSACIG00000008091	srsf1a	83	97.927	Amphilophus_citrinellus
ENSMALG00000017129	-	84	96.744	ENSAOCG00000010671	-	88	96.744	Amphiprion_ocellaris
ENSMALG00000017129	-	75	87.940	ENSAOCG00000000337	-	80	87.940	Amphiprion_ocellaris
ENSMALG00000017129	-	75	87.940	ENSAPEG00000023352	-	79	87.940	Amphiprion_percula
ENSMALG00000017129	-	84	96.744	ENSAPEG00000009915	-	88	96.744	Amphiprion_percula
ENSMALG00000017129	-	84	96.744	ENSATEG00000022403	-	87	96.744	Anabas_testudineus
ENSMALG00000017129	-	78	87.879	ENSATEG00000021567	-	80	88.542	Anabas_testudineus
ENSMALG00000017129	-	75	87.565	ENSACAG00000005542	-	78	90.674	Anolis_carolinensis
ENSMALG00000017129	-	76	67.010	ENSANAG00000025417	-	73	67.539	Aotus_nancymaae
ENSMALG00000017129	-	75	88.601	ENSANAG00000020583	-	95	89.855	Aotus_nancymaae
ENSMALG00000017129	-	51	72.903	ENSAMXG00000024373	-	72	76.774	Astyanax_mexicanus
ENSMALG00000017129	-	75	85.859	ENSAMXG00000035996	srsf1a	79	88.384	Astyanax_mexicanus
ENSMALG00000017129	-	75	88.601	ENSBTAG00000014766	SRSF1	78	91.710	Bos_taurus
ENSMALG00000017129	-	75	88.601	ENSCJAG00000041713	-	95	89.855	Callithrix_jacchus
ENSMALG00000017129	-	75	82.383	ENSCJAG00000008111	-	86	84.974	Callithrix_jacchus
ENSMALG00000017129	-	75	88.601	ENSCAFG00000017430	SRSF1	76	91.710	Canis_familiaris
ENSMALG00000017129	-	75	88.601	ENSCAFG00020025632	-	76	91.710	Canis_lupus_dingo
ENSMALG00000017129	-	75	88.601	ENSCHIG00000010787	SRSF1	78	91.710	Capra_hircus
ENSMALG00000017129	-	75	88.601	ENSTSYG00000013899	-	95	89.855	Carlito_syrichta
ENSMALG00000017129	-	75	88.601	ENSCPOG00000032681	-	78	91.710	Cavia_porcellus
ENSMALG00000017129	-	75	88.601	ENSCCAG00000029484	-	95	89.855	Cebus_capucinus
ENSMALG00000017129	-	75	88.601	ENSCATG00000042294	-	95	89.855	Cercocebus_atys
ENSMALG00000017129	-	75	88.601	ENSCLAG00000014707	-	78	91.710	Chinchilla_lanigera
ENSMALG00000017129	-	75	87.565	ENSCSAG00000005642	-	76	90.674	Chlorocebus_sabaeus
ENSMALG00000017129	-	75	88.601	ENSCHOG00000001899	SRSF1	78	91.710	Choloepus_hoffmanni
ENSMALG00000017129	-	75	88.083	ENSCPBG00000009851	-	78	91.192	Chrysemys_picta_bellii
ENSMALG00000017129	-	75	88.601	ENSCANG00000029726	-	95	89.855	Colobus_angolensis_palliatus
ENSMALG00000017129	-	75	88.601	ENSCGRG00001000670	Srsf1	76	91.710	Cricetulus_griseus_chok1gshd
ENSMALG00000017129	-	75	88.601	ENSCGRG00000005590	Srsf1	78	91.710	Cricetulus_griseus_crigri
ENSMALG00000017129	-	76	94.444	ENSCSEG00000014272	-	82	93.782	Cynoglossus_semilaevis
ENSMALG00000017129	-	75	81.731	ENSCSEG00000009973	-	79	81.731	Cynoglossus_semilaevis
ENSMALG00000017129	-	76	98.964	ENSCVAG00000018617	-	79	98.964	Cyprinodon_variegatus
ENSMALG00000017129	-	75	86.598	ENSCVAG00000005458	-	91	85.792	Cyprinodon_variegatus
ENSMALG00000017129	-	75	83.251	ENSDARG00000057691	srsf1a	99	84.293	Danio_rerio
ENSMALG00000017129	-	75	89.637	ENSDARG00000017843	srsf1b	79	91.710	Danio_rerio
ENSMALG00000017129	-	75	88.601	ENSDNOG00000011737	-	76	91.710	Dasypus_novemcinctus
ENSMALG00000017129	-	75	88.601	ENSDORG00000015082	Srsf1	78	91.710	Dipodomys_ordii
ENSMALG00000017129	-	70	89.444	ENSETEG00000005349	-	62	90.556	Echinops_telfairi
ENSMALG00000017129	-	75	88.601	ENSEASG00005002922	-	76	91.710	Equus_asinus_asinus
ENSMALG00000017129	-	75	88.601	ENSECAG00000016654	SRSF1	78	91.710	Equus_caballus
ENSMALG00000017129	-	70	90.556	ENSEEUG00000009255	-	62	91.160	Erinaceus_europaeus
ENSMALG00000017129	-	75	92.708	ENSELUG00000021646	srsf1a	76	93.750	Esox_lucius
ENSMALG00000017129	-	75	88.601	ENSFCAG00000002250	-	90	91.160	Felis_catus
ENSMALG00000017129	-	54	95.238	ENSFALG00000005062	-	76	72.539	Ficedula_albicollis
ENSMALG00000017129	-	75	88.601	ENSFDAG00000010646	-	78	91.710	Fukomys_damarensis
ENSMALG00000017129	-	76	98.446	ENSFHEG00000003174	srsf1a	84	98.446	Fundulus_heteroclitus
ENSMALG00000017129	-	77	89.286	ENSGMOG00000014787	-	80	88.482	Gadus_morhua
ENSMALG00000017129	-	75	88.083	ENSGALG00000005525	SRSF1	78	91.192	Gallus_gallus
ENSMALG00000017129	-	75	86.387	ENSGACG00000020621	srsf1b	78	85.864	Gasterosteus_aculeatus
ENSMALG00000017129	-	75	88.083	ENSGAGG00000022965	-	76	91.192	Gopherus_agassizii
ENSMALG00000017129	-	75	88.601	ENSGGOG00000004386	SRSF1	95	89.855	Gorilla_gorilla
ENSMALG00000017129	-	76	98.446	ENSHBUG00000016788	srsf1a	81	97.927	Haplochromis_burtoni
ENSMALG00000017129	-	64	87.805	ENSHGLG00000000669	-	76	91.463	Heterocephalus_glaber_female
ENSMALG00000017129	-	64	87.805	ENSHGLG00000000600	-	76	91.463	Heterocephalus_glaber_female
ENSMALG00000017129	-	75	88.601	ENSHGLG00100016906	-	78	91.710	Heterocephalus_glaber_male
ENSMALG00000017129	-	76	88.945	ENSHCOG00000018918	srsf1a	78	91.960	Hippocampus_comes
ENSMALG00000017129	-	76	85.075	ENSIPUG00000017039	srsf1a	80	88.060	Ictalurus_punctatus
ENSMALG00000017129	-	75	89.062	ENSIPUG00000008750	srsf1b	78	91.667	Ictalurus_punctatus
ENSMALG00000017129	-	75	88.601	ENSSTOG00000000243	-	91	91.160	Ictidomys_tridecemlineatus
ENSMALG00000017129	-	75	88.601	ENSJJAG00000000102	-	78	91.710	Jaculus_jaculus
ENSMALG00000017129	-	76	96.907	ENSKMAG00000019232	srsf1a	79	98.454	Kryptolebias_marmoratus
ENSMALG00000017129	-	75	79.592	ENSLBEG00000015294	-	79	81.122	Labrus_bergylta
ENSMALG00000017129	-	76	98.446	ENSLBEG00000020864	-	84	98.446	Labrus_bergylta
ENSMALG00000017129	-	75	89.583	ENSLACG00000014160	srsf1a	73	88.660	Latimeria_chalumnae
ENSMALG00000017129	-	75	88.542	ENSLOCG00000005994	srsf1a	78	91.667	Lepisosteus_oculatus
ENSMALG00000017129	-	75	88.601	ENSLAFG00000025743	SRSF1	78	91.710	Loxodonta_africana
ENSMALG00000017129	-	75	88.601	ENSMFAG00000040003	-	95	89.855	Macaca_fascicularis
ENSMALG00000017129	-	75	85.492	ENSMMUG00000003260	-	93	87.565	Macaca_mulatta
ENSMALG00000017129	-	75	88.601	ENSMMUG00000004725	SRSF1	95	89.855	Macaca_mulatta
ENSMALG00000017129	-	75	88.601	ENSMNEG00000027680	-	95	89.855	Macaca_nemestrina
ENSMALG00000017129	-	75	86.010	ENSMNEG00000015983	-	76	88.601	Macaca_nemestrina
ENSMALG00000017129	-	75	85.864	ENSMLEG00000015243	-	76	87.435	Mandrillus_leucophaeus
ENSMALG00000017129	-	75	88.601	ENSMLEG00000040509	SRSF1	78	91.710	Mandrillus_leucophaeus
ENSMALG00000017129	-	75	92.188	ENSMAMG00000019691	-	80	91.667	Mastacembelus_armatus
ENSMALG00000017129	-	84	96.744	ENSMAMG00000018454	-	88	96.744	Mastacembelus_armatus
ENSMALG00000017129	-	75	90.052	ENSMAMG00000019687	-	78	90.052	Mastacembelus_armatus
ENSMALG00000017129	-	75	88.601	ENSMAUG00000021845	Srsf1	78	91.710	Mesocricetus_auratus
ENSMALG00000017129	-	75	88.601	ENSMICG00000013639	-	95	89.855	Microcebus_murinus
ENSMALG00000017129	-	75	88.601	ENSMOCG00000001996	Srsf1	78	91.710	Microtus_ochrogaster
ENSMALG00000017129	-	76	97.927	ENSMMOG00000014354	srsf1a	84	97.927	Mola_mola
ENSMALG00000017129	-	70	90.055	ENSMODG00000014781	-	62	90.110	Monodelphis_domestica
ENSMALG00000017129	-	75	88.601	MGP_CAROLIEiJ_G0016943	Srsf1	90	91.160	Mus_caroli
ENSMALG00000017129	-	75	88.601	ENSMUSG00000018379	Srsf1	90	91.160	Mus_musculus
ENSMALG00000017129	-	75	88.601	MGP_PahariEiJ_G0018074	Srsf1	74	97.436	Mus_pahari
ENSMALG00000017129	-	75	88.601	MGP_SPRETEiJ_G0017790	Srsf1	90	91.160	Mus_spretus
ENSMALG00000017129	-	75	88.601	ENSMPUG00000015369	SRSF1	78	91.710	Mustela_putorius_furo
ENSMALG00000017129	-	77	86.802	ENSMLUG00000023995	-	77	87.435	Myotis_lucifugus
ENSMALG00000017129	-	75	88.601	ENSMLUG00000011040	SRSF1	78	91.710	Myotis_lucifugus
ENSMALG00000017129	-	75	88.601	ENSNGAG00000011395	Srsf1	78	91.710	Nannospalax_galili
ENSMALG00000017129	-	75	80.729	ENSNBRG00000008041	srsf1b	78	77.487	Neolamprologus_brichardi
ENSMALG00000017129	-	75	88.601	ENSNLEG00000008088	-	95	89.855	Nomascus_leucogenys
ENSMALG00000017129	-	51	86.364	ENSOPRG00000001234	-	72	90.909	Ochotona_princeps
ENSMALG00000017129	-	75	88.601	ENSODEG00000011481	-	78	91.710	Octodon_degus
ENSMALG00000017129	-	76	91.282	ENSONIG00000004860	-	79	90.625	Oreochromis_niloticus
ENSMALG00000017129	-	76	98.446	ENSONIG00000013160	-	78	97.927	Oreochromis_niloticus
ENSMALG00000017129	-	78	71.717	ENSOCUG00000010894	-	75	72.487	Oryctolagus_cuniculus
ENSMALG00000017129	-	84	96.744	ENSORLG00000004580	srsf1a	88	96.744	Oryzias_latipes
ENSMALG00000017129	-	84	96.744	ENSORLG00020009456	srsf1a	88	96.744	Oryzias_latipes_hni
ENSMALG00000017129	-	84	96.744	ENSORLG00015014384	srsf1a	88	96.744	Oryzias_latipes_hsok
ENSMALG00000017129	-	68	97.701	ENSOMEG00000004106	srsf1a	71	97.701	Oryzias_melastigma
ENSMALG00000017129	-	96	75.294	ENSOGAG00000025950	-	78	91.710	Otolemur_garnettii
ENSMALG00000017129	-	75	89.005	ENSOARG00000008323	SRSF1	77	89.005	Ovis_aries
ENSMALG00000017129	-	75	88.601	ENSPPAG00000043403	-	95	89.855	Pan_paniscus
ENSMALG00000017129	-	75	88.601	ENSPPRG00000004238	-	90	91.160	Panthera_pardus
ENSMALG00000017129	-	75	88.601	ENSPTRG00000049077	SRSF1	95	89.855	Pan_troglodytes
ENSMALG00000017129	-	75	69.072	ENSPANG00000030275	-	75	68.041	Papio_anubis
ENSMALG00000017129	-	75	88.601	ENSPANG00000022305	-	95	89.855	Papio_anubis
ENSMALG00000017129	-	75	88.542	ENSPKIG00000012857	srsf1b	78	91.667	Paramormyrops_kingsleyae
ENSMALG00000017129	-	75	91.146	ENSPKIG00000007204	srsf1a	83	91.146	Paramormyrops_kingsleyae
ENSMALG00000017129	-	75	80.829	ENSPSIG00000009000	-	72	90.977	Pelodiscus_sinensis
ENSMALG00000017129	-	77	88.265	ENSPMGG00000005467	-	79	88.083	Periophthalmus_magnuspinnatus
ENSMALG00000017129	-	76	94.819	ENSPMGG00000013112	-	83	94.819	Periophthalmus_magnuspinnatus
ENSMALG00000017129	-	75	88.601	ENSPEMG00000021416	Srsf1	78	91.710	Peromyscus_maniculatus_bairdii
ENSMALG00000017129	-	75	88.660	ENSPCIG00000006076	-	78	91.753	Phascolarctos_cinereus
ENSMALG00000017129	-	76	86.802	ENSPFOG00000018325	-	69	87.047	Poecilia_formosa
ENSMALG00000017129	-	76	86.802	ENSPLAG00000008416	srsf1b	78	87.047	Poecilia_latipinna
ENSMALG00000017129	-	76	86.802	ENSPMEG00000002388	-	78	87.047	Poecilia_mexicana
ENSMALG00000017129	-	76	98.964	ENSPREG00000009667	srsf1a	79	98.964	Poecilia_reticulata
ENSMALG00000017129	-	75	88.601	ENSPPYG00000008240	SRSF1	78	91.710	Pongo_abelii
ENSMALG00000017129	-	75	88.601	ENSPCAG00000005199	SRSF1	78	91.710	Procavia_capensis
ENSMALG00000017129	-	76	71.717	ENSPCOG00000025736	-	93	72.251	Propithecus_coquereli
ENSMALG00000017129	-	75	88.601	ENSPCOG00000023654	-	95	89.855	Propithecus_coquereli
ENSMALG00000017129	-	56	97.590	ENSPVAG00000000519	-	58	97.590	Pteropus_vampyrus
ENSMALG00000017129	-	75	91.623	ENSPNAG00000014601	srsf1b	78	91.623	Pygocentrus_nattereri
ENSMALG00000017129	-	75	91.099	ENSPNAG00000022241	srsf1a	78	90.576	Pygocentrus_nattereri
ENSMALG00000017129	-	75	88.601	ENSRNOG00000050323	Srsf1	78	91.710	Rattus_norvegicus
ENSMALG00000017129	-	75	88.601	ENSRBIG00000034445	-	95	89.855	Rhinopithecus_bieti
ENSMALG00000017129	-	75	88.601	ENSRROG00000041506	-	95	89.855	Rhinopithecus_roxellana
ENSMALG00000017129	-	75	88.601	ENSSBOG00000025377	-	95	89.855	Saimiri_boliviensis_boliviensis
ENSMALG00000017129	-	75	88.660	ENSSHAG00000002552	-	78	91.753	Sarcophilus_harrisii
ENSMALG00000017129	-	75	92.147	ENSSFOG00015004800	srsf1a	77	92.147	Scleropages_formosus
ENSMALG00000017129	-	75	84.500	ENSSMAG00000009719	-	78	84.500	Scophthalmus_maximus
ENSMALG00000017129	-	76	97.927	ENSSMAG00000007018	-	79	97.927	Scophthalmus_maximus
ENSMALG00000017129	-	77	79.104	ENSSDUG00000003929	-	83	79.798	Seriola_dumerili
ENSMALG00000017129	-	76	98.446	ENSSDUG00000011303	-	84	98.446	Seriola_dumerili
ENSMALG00000017129	-	71	80.978	ENSSLDG00000016895	-	77	82.609	Seriola_lalandi_dorsalis
ENSMALG00000017129	-	76	98.446	ENSSLDG00000010543	-	79	98.446	Seriola_lalandi_dorsalis
ENSMALG00000017129	-	75	78.646	ENSSLDG00000016868	-	76	78.646	Seriola_lalandi_dorsalis
ENSMALG00000017129	-	70	90.556	ENSSARG00000010949	-	62	91.160	Sorex_araneus
ENSMALG00000017129	-	75	88.083	ENSSPUG00000000804	-	91	90.608	Sphenodon_punctatus
ENSMALG00000017129	-	75	84.466	ENSSPAG00000014152	-	80	84.466	Stegastes_partitus
ENSMALG00000017129	-	76	98.454	ENSSPAG00000022562	-	79	98.454	Stegastes_partitus
ENSMALG00000017129	-	75	88.601	ENSSSCG00000017626	-	78	91.710	Sus_scrofa
ENSMALG00000017129	-	51	85.714	ENSTGUG00000008416	-	72	90.226	Taeniopygia_guttata
ENSMALG00000017129	-	76	98.446	ENSTRUG00000003691	srsf1a	79	98.446	Takifugu_rubripes
ENSMALG00000017129	-	76	98.446	ENSTNIG00000016223	srsf1a	78	98.446	Tetraodon_nigroviridis
ENSMALG00000017129	-	70	86.667	ENSTBEG00000015378	-	62	90.055	Tupaia_belangeri
ENSMALG00000017129	-	51	86.364	ENSTTRG00000007310	SRSF1	72	90.909	Tursiops_truncatus
ENSMALG00000017129	-	75	88.601	ENSUAMG00000009858	SRSF1	78	91.710	Ursus_americanus
ENSMALG00000017129	-	75	88.601	ENSUMAG00000000455	-	76	91.710	Ursus_maritimus
ENSMALG00000017129	-	75	88.083	ENSVPAG00000010094	SRSF1	78	91.192	Vicugna_pacos
ENSMALG00000017129	-	75	88.601	ENSVVUG00000011882	-	76	91.710	Vulpes_vulpes
ENSMALG00000017129	-	75	91.623	ENSXETG00000008954	srsf1	79	83.962	Xenopus_tropicalis
ENSMALG00000017129	-	76	98.964	ENSXMAG00000011766	srsf1a	79	98.964	Xiphophorus_maculatus