EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000017152 (Gene tree)
Gene ID: 109971503
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 2940 bases
Position: chrKV884914.1:480885-483824
Accession: 109971503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000024707	GTP_EFTU	PF00009.27	6.7e-52	1	1
ENSMALP00000024726	GTP_EFTU	PF00009.27	8.6e-34	1	1
ENSMALP00000024657	GTP_EFTU	PF00009.27	1.9e-20	1	1
ENSMALP00000024726	GTP_EFTU_D2	PF03144.25	1.1e-11	1	1
ENSMALP00000024707	GTP_EFTU_D2	PF03144.25	1.3e-11	1	1
ENSMALP00000024726	GTP_EFTU_D3	PF03143.17	5.9e-37	1	1
ENSMALP00000024707	GTP_EFTU_D3	PF03143.17	1.8e-33	1	1
ENSMALP00000024657	GTP_EFTU_D3	PF03143.17	1.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000025192	-	1215	-	ENSMALP00000024726	404 (aa)	-	-
ENSMALT00000025120	-	579	-	ENSMALP00000024657	192 (aa)	-	-
ENSMALT00000025172	-	1311	XM_020619800	ENSMALP00000024707	437 (aa)	XP_020475456	-

Gene Model

Click here to download ENSMALG00000017152's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000017152's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000017152	si:dkey-37o8.1	99	37.471	ENSMALG00000010768	hbs1l	68	37.471
ENSMALG00000017152	si:dkey-37o8.1	99	36.259	ENSMALG00000003550	-	74	36.259
ENSMALG00000017152	si:dkey-37o8.1	94	66.755	ENSMALG00000020643	-	95	67.259
ENSMALG00000017152	si:dkey-37o8.1	95	68.660	ENSMALG00000014576	-	97	68.660
ENSMALG00000017152	si:dkey-37o8.1	93	30.077	ENSMALG00000020254	tufm	76	30.077
ENSMALG00000017152	si:dkey-37o8.1	99	68.721	ENSMALG00000005022	eef1a1b	95	68.721
ENSMALG00000017152	si:dkey-37o8.1	99	36.239	ENSMALG00000009500	GSPT1	72	36.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000017152	si:dkey-37o8.1	99	81.963	ENSAPOG00000016459	si:dkey-37o8.1	96	81.963	Acanthochromis_polyacanthus
ENSMALG00000017152	si:dkey-37o8.1	99	79.908	ENSACIG00000020985	si:dkey-37o8.1	81	79.908	Amphilophus_citrinellus
ENSMALG00000017152	si:dkey-37o8.1	99	82.648	ENSAOCG00000002663	si:dkey-37o8.1	96	82.648	Amphiprion_ocellaris
ENSMALG00000017152	si:dkey-37o8.1	99	82.648	ENSAPEG00000012670	si:dkey-37o8.1	96	82.648	Amphiprion_percula
ENSMALG00000017152	si:dkey-37o8.1	95	83.493	ENSATEG00000002217	si:dkey-37o8.1	98	83.493	Anabas_testudineus
ENSMALG00000017152	si:dkey-37o8.1	99	81.963	ENSACLG00000003519	si:dkey-37o8.1	96	81.963	Astatotilapia_calliptera
ENSMALG00000017152	si:dkey-37o8.1	99	79.224	ENSAMXG00000002728	si:dkey-37o8.1	95	79.224	Astyanax_mexicanus
ENSMALG00000017152	si:dkey-37o8.1	99	71.918	ENSCPBG00000020570	-	86	71.918	Chrysemys_picta_bellii
ENSMALG00000017152	si:dkey-37o8.1	99	77.727	ENSCSEG00000019807	si:dkey-37o8.1	96	77.303	Cynoglossus_semilaevis
ENSMALG00000017152	si:dkey-37o8.1	99	80.594	ENSCVAG00000009828	si:dkey-37o8.1	96	80.594	Cyprinodon_variegatus
ENSMALG00000017152	si:dkey-37o8.1	99	75.114	ENSDARG00000071727	si:dkey-37o8.1	90	75.114	Danio_rerio
ENSMALG00000017152	si:dkey-37o8.1	99	77.169	ENSELUG00000007495	si:dkey-37o8.1	95	77.169	Esox_lucius
ENSMALG00000017152	si:dkey-37o8.1	99	81.050	ENSFHEG00000017452	si:dkey-37o8.1	96	81.050	Fundulus_heteroclitus
ENSMALG00000017152	si:dkey-37o8.1	99	71.918	ENSGMOG00000006122	si:dkey-37o8.1	96	71.918	Gadus_morhua
ENSMALG00000017152	si:dkey-37o8.1	99	74.429	ENSGAFG00000000367	si:dkey-37o8.1	97	74.429	Gambusia_affinis
ENSMALG00000017152	si:dkey-37o8.1	99	80.822	ENSGACG00000004505	si:dkey-37o8.1	96	80.822	Gasterosteus_aculeatus
ENSMALG00000017152	si:dkey-37o8.1	99	72.374	ENSGAGG00000007724	-	92	75.000	Gopherus_agassizii
ENSMALG00000017152	si:dkey-37o8.1	99	82.192	ENSHBUG00000015515	si:dkey-37o8.1	96	82.192	Haplochromis_burtoni
ENSMALG00000017152	si:dkey-37o8.1	99	73.288	ENSHCOG00000001215	si:dkey-37o8.1	97	73.288	Hippocampus_comes
ENSMALG00000017152	si:dkey-37o8.1	99	77.626	ENSIPUG00000004067	si:dkey-37o8.1	95	77.626	Ictalurus_punctatus
ENSMALG00000017152	si:dkey-37o8.1	99	80.365	ENSKMAG00000015910	si:dkey-37o8.1	96	80.365	Kryptolebias_marmoratus
ENSMALG00000017152	si:dkey-37o8.1	99	81.735	ENSLBEG00000021334	si:dkey-37o8.1	87	81.735	Labrus_bergylta
ENSMALG00000017152	si:dkey-37o8.1	99	73.973	ENSLACG00000003948	si:dkey-37o8.1	95	73.973	Latimeria_chalumnae
ENSMALG00000017152	si:dkey-37o8.1	99	76.941	ENSLOCG00000011245	si:dkey-37o8.1	95	76.941	Lepisosteus_oculatus
ENSMALG00000017152	si:dkey-37o8.1	99	79.680	ENSMAMG00000009907	si:dkey-37o8.1	91	79.680	Mastacembelus_armatus
ENSMALG00000017152	si:dkey-37o8.1	99	81.963	ENSMZEG00005018358	si:dkey-37o8.1	96	81.963	Maylandia_zebra
ENSMALG00000017152	si:dkey-37o8.1	99	80.137	ENSMMOG00000004111	si:dkey-37o8.1	96	79.904	Mola_mola
ENSMALG00000017152	si:dkey-37o8.1	99	81.963	ENSNBRG00000013552	si:dkey-37o8.1	96	81.963	Neolamprologus_brichardi
ENSMALG00000017152	si:dkey-37o8.1	99	81.735	ENSONIG00000006165	si:dkey-37o8.1	96	81.735	Oreochromis_niloticus
ENSMALG00000017152	si:dkey-37o8.1	99	80.365	ENSORLG00000019066	si:dkey-37o8.1	96	80.365	Oryzias_latipes
ENSMALG00000017152	si:dkey-37o8.1	99	80.365	ENSORLG00020008094	si:dkey-37o8.1	96	80.365	Oryzias_latipes_hni
ENSMALG00000017152	si:dkey-37o8.1	99	80.137	ENSORLG00015008410	si:dkey-37o8.1	96	80.137	Oryzias_latipes_hsok
ENSMALG00000017152	si:dkey-37o8.1	99	80.365	ENSOMEG00000001868	si:dkey-37o8.1	96	80.365	Oryzias_melastigma
ENSMALG00000017152	si:dkey-37o8.1	99	77.626	ENSPKIG00000017246	si:dkey-37o8.1	95	77.626	Paramormyrops_kingsleyae
ENSMALG00000017152	si:dkey-37o8.1	65	66.292	ENSPSIG00000008080	-	94	66.292	Pelodiscus_sinensis
ENSMALG00000017152	si:dkey-37o8.1	83	75.625	ENSPMGG00000013752	si:dkey-37o8.1	87	82.090	Periophthalmus_magnuspinnatus
ENSMALG00000017152	si:dkey-37o8.1	99	80.365	ENSPFOG00000013173	si:dkey-37o8.1	96	80.365	Poecilia_formosa
ENSMALG00000017152	si:dkey-37o8.1	97	80.282	ENSPLAG00000010405	si:dkey-37o8.1	96	79.909	Poecilia_latipinna
ENSMALG00000017152	si:dkey-37o8.1	99	80.822	ENSPMEG00000015233	si:dkey-37o8.1	96	80.822	Poecilia_mexicana
ENSMALG00000017152	si:dkey-37o8.1	99	80.505	ENSPREG00000006280	si:dkey-37o8.1	96	80.505	Poecilia_reticulata
ENSMALG00000017152	si:dkey-37o8.1	99	81.279	ENSPNYG00000002059	si:dkey-37o8.1	96	81.279	Pundamilia_nyererei
ENSMALG00000017152	si:dkey-37o8.1	99	78.539	ENSPNAG00000009990	si:dkey-37o8.1	96	78.539	Pygocentrus_nattereri
ENSMALG00000017152	si:dkey-37o8.1	99	77.626	ENSSFOG00015019070	si:dkey-37o8.1	96	77.626	Scleropages_formosus
ENSMALG00000017152	si:dkey-37o8.1	99	83.562	ENSSMAG00000016143	si:dkey-37o8.1	96	83.562	Scophthalmus_maximus
ENSMALG00000017152	si:dkey-37o8.1	99	83.105	ENSSDUG00000009163	si:dkey-37o8.1	96	83.105	Seriola_dumerili
ENSMALG00000017152	si:dkey-37o8.1	99	83.105	ENSSLDG00000023761	si:dkey-37o8.1	96	83.105	Seriola_lalandi_dorsalis
ENSMALG00000017152	si:dkey-37o8.1	100	69.932	ENSSPUG00000007467	-	95	70.345	Sphenodon_punctatus
ENSMALG00000017152	si:dkey-37o8.1	99	82.420	ENSSPAG00000013856	si:dkey-37o8.1	96	82.420	Stegastes_partitus
ENSMALG00000017152	si:dkey-37o8.1	99	82.339	ENSTRUG00000009006	si:dkey-37o8.1	97	82.339	Takifugu_rubripes
ENSMALG00000017152	si:dkey-37o8.1	99	81.507	ENSTNIG00000017138	si:dkey-37o8.1	94	81.507	Tetraodon_nigroviridis
ENSMALG00000017152	si:dkey-37o8.1	99	73.973	ENSXETG00000017744	42Sp50	94	73.973	Xenopus_tropicalis
ENSMALG00000017152	si:dkey-37o8.1	99	80.734	ENSXCOG00000012296	si:dkey-37o8.1	96	80.734	Xiphophorus_couchianus
ENSMALG00000017152	si:dkey-37o8.1	99	80.365	ENSXMAG00000001998	si:dkey-37o8.1	96	80.365	Xiphophorus_maculatus