EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000017211 (Gene tree)
Gene ID: 109972678
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 19595 bases
Position: chrKV884954.1:515822-535416
Accession: 109972678
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000024773	SF3b1	PF08920.10	1.8e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000025241	-	4555	XM_020621695	ENSMALP00000024773	1314 (aa)	XP_020477351	UPI0009B423A8

Gene Model

Click here to download ENSMALG00000017211's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000017211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000017211	sf3b1	100	93.541	ENSG00000115524	SF3B1	100	93.541	Homo_sapiens
ENSMALG00000017211	sf3b1	100	98.935	ENSAPOG00000011894	sf3b1	100	98.935	Acanthochromis_polyacanthus
ENSMALG00000017211	sf3b1	99	93.425	ENSAMEG00000013809	SF3B1	99	93.425	Ailuropoda_melanoleuca
ENSMALG00000017211	sf3b1	100	97.641	ENSACIG00000020910	sf3b1	97	97.641	Amphilophus_citrinellus
ENSMALG00000017211	sf3b1	100	98.935	ENSAOCG00000004478	sf3b1	100	98.935	Amphiprion_ocellaris
ENSMALG00000017211	sf3b1	100	98.935	ENSAPEG00000012937	sf3b1	100	98.935	Amphiprion_percula
ENSMALG00000017211	sf3b1	100	98.706	ENSATEG00000020435	sf3b1	100	98.706	Anabas_testudineus
ENSMALG00000017211	sf3b1	99	93.870	ENSAPLG00000003993	SF3B1	99	93.870	Anas_platyrhynchos
ENSMALG00000017211	sf3b1	100	93.688	ENSACAG00000009612	SF3B1	100	93.688	Anolis_carolinensis
ENSMALG00000017211	sf3b1	100	93.541	ENSANAG00000021577	SF3B1	100	94.777	Aotus_nancymaae
ENSMALG00000017211	sf3b1	100	97.717	ENSACLG00000023470	sf3b1	100	97.717	Astatotilapia_calliptera
ENSMALG00000017211	sf3b1	100	96.960	ENSAMXG00000002219	sf3b1	100	96.960	Astyanax_mexicanus
ENSMALG00000017211	sf3b1	100	93.541	ENSBTAG00000008915	SF3B1	100	93.541	Bos_taurus
ENSMALG00000017211	sf3b1	98	65.292	WBGene00011605	sftb-1	97	65.442	Caenorhabditis_elegans
ENSMALG00000017211	sf3b1	100	93.541	ENSCJAG00000003902	SF3B1	100	93.541	Callithrix_jacchus
ENSMALG00000017211	sf3b1	100	93.541	ENSCAFG00000010826	SF3B1	100	93.541	Canis_familiaris
ENSMALG00000017211	sf3b1	100	93.541	ENSCAFG00020004750	SF3B1	100	93.541	Canis_lupus_dingo
ENSMALG00000017211	sf3b1	100	93.541	ENSCHIG00000015226	SF3B1	100	93.541	Capra_hircus
ENSMALG00000017211	sf3b1	100	93.465	ENSTSYG00000009214	SF3B1	100	93.465	Carlito_syrichta
ENSMALG00000017211	sf3b1	99	93.369	ENSCAPG00000006547	SF3B1	99	93.369	Cavia_aperea
ENSMALG00000017211	sf3b1	99	93.492	ENSCPOG00000009353	SF3B1	100	93.492	Cavia_porcellus
ENSMALG00000017211	sf3b1	100	93.541	ENSCCAG00000020506	SF3B1	100	93.541	Cebus_capucinus
ENSMALG00000017211	sf3b1	100	93.541	ENSCATG00000035735	SF3B1	100	93.541	Cercocebus_atys
ENSMALG00000017211	sf3b1	99	93.497	ENSCLAG00000014767	SF3B1	99	93.497	Chinchilla_lanigera
ENSMALG00000017211	sf3b1	100	93.541	ENSCSAG00000011505	SF3B1	100	93.541	Chlorocebus_sabaeus
ENSMALG00000017211	sf3b1	76	92.588	ENSCHOG00000009860	SF3B1	76	92.588	Choloepus_hoffmanni
ENSMALG00000017211	sf3b1	100	93.836	ENSCPBG00000021902	SF3B1	99	94.865	Chrysemys_picta_bellii
ENSMALG00000017211	sf3b1	68	78.057	ENSCING00000002558	-	99	78.405	Ciona_intestinalis
ENSMALG00000017211	sf3b1	99	79.759	ENSCSAVG00000002559	-	99	79.759	Ciona_savignyi
ENSMALG00000017211	sf3b1	100	93.541	ENSCANG00000029415	SF3B1	100	93.541	Colobus_angolensis_palliatus
ENSMALG00000017211	sf3b1	100	93.541	ENSCGRG00001016990	Sf3b1	100	93.541	Cricetulus_griseus_chok1gshd
ENSMALG00000017211	sf3b1	100	93.541	ENSCGRG00000005301	Sf3b1	100	93.541	Cricetulus_griseus_crigri
ENSMALG00000017211	sf3b1	100	93.988	ENSCSEG00000003860	sf3b1	100	93.988	Cynoglossus_semilaevis
ENSMALG00000017211	sf3b1	96	98.179	ENSCVAG00000003680	sf3b1	99	98.179	Cyprinodon_variegatus
ENSMALG00000017211	sf3b1	100	95.741	ENSDARG00000056138	sf3b1	100	95.741	Danio_rerio
ENSMALG00000017211	sf3b1	100	93.470	ENSDNOG00000011754	SF3B1	100	93.470	Dasypus_novemcinctus
ENSMALG00000017211	sf3b1	99	91.577	ENSDORG00000002399	Sf3b1	100	91.501	Dipodomys_ordii
ENSMALG00000017211	sf3b1	100	75.660	FBgn0031266	Sf3b1	100	75.660	Drosophila_melanogaster
ENSMALG00000017211	sf3b1	83	92.385	ENSETEG00000009188	SF3B1	100	92.385	Echinops_telfairi
ENSMALG00000017211	sf3b1	99	86.738	ENSEBUG00000004325	sf3b1	100	88.898	Eptatretus_burgeri
ENSMALG00000017211	sf3b1	100	93.541	ENSEASG00005020159	SF3B1	98	93.541	Equus_asinus_asinus
ENSMALG00000017211	sf3b1	100	93.541	ENSECAG00000021657	SF3B1	98	93.541	Equus_caballus
ENSMALG00000017211	sf3b1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSMALG00000017211	sf3b1	100	96.148	ENSELUG00000005977	sf3b1	98	96.148	Esox_lucius
ENSMALG00000017211	sf3b1	100	93.541	ENSFCAG00000005038	SF3B1	100	93.541	Felis_catus
ENSMALG00000017211	sf3b1	99	93.793	ENSFALG00000004281	SF3B1	99	93.793	Ficedula_albicollis
ENSMALG00000017211	sf3b1	100	93.541	ENSFDAG00000017510	SF3B1	100	93.541	Fukomys_damarensis
ENSMALG00000017211	sf3b1	100	97.034	ENSFHEG00000014333	sf3b1	100	97.034	Fundulus_heteroclitus
ENSMALG00000017211	sf3b1	100	96.507	ENSGMOG00000006773	sf3b1	100	96.507	Gadus_morhua
ENSMALG00000017211	sf3b1	100	93.912	ENSGALG00000008038	SF3B1	100	93.912	Gallus_gallus
ENSMALG00000017211	sf3b1	98	98.224	ENSGAFG00000000704	sf3b1	100	98.224	Gambusia_affinis
ENSMALG00000017211	sf3b1	100	97.264	ENSGACG00000008839	sf3b1	100	97.264	Gasterosteus_aculeatus
ENSMALG00000017211	sf3b1	100	93.197	ENSGAGG00000017478	SF3B1	100	93.197	Gopherus_agassizii
ENSMALG00000017211	sf3b1	99	88.515	ENSGGOG00000009264	SF3B1	99	88.515	Gorilla_gorilla
ENSMALG00000017211	sf3b1	99	97.790	ENSHBUG00000007705	sf3b1	99	97.790	Haplochromis_burtoni
ENSMALG00000017211	sf3b1	99	93.497	ENSHGLG00000008285	-	99	93.497	Heterocephalus_glaber_female
ENSMALG00000017211	sf3b1	99	91.507	ENSHGLG00100005535	-	99	91.507	Heterocephalus_glaber_male
ENSMALG00000017211	sf3b1	100	97.050	ENSHCOG00000016775	sf3b1	100	97.050	Hippocampus_comes
ENSMALG00000017211	sf3b1	100	96.730	ENSIPUG00000013171	sf3b1	100	96.730	Ictalurus_punctatus
ENSMALG00000017211	sf3b1	100	93.541	ENSSTOG00000011034	SF3B1	100	93.541	Ictidomys_tridecemlineatus
ENSMALG00000017211	sf3b1	99	93.472	ENSJJAG00000010903	Sf3b1	99	93.472	Jaculus_jaculus
ENSMALG00000017211	sf3b1	100	97.496	ENSKMAG00000004009	sf3b1	100	97.496	Kryptolebias_marmoratus
ENSMALG00000017211	sf3b1	100	97.565	ENSLBEG00000022208	sf3b1	100	97.565	Labrus_bergylta
ENSMALG00000017211	sf3b1	99	90.722	ENSLACG00000014832	SF3B1	99	90.722	Latimeria_chalumnae
ENSMALG00000017211	sf3b1	100	95.382	ENSLOCG00000003899	sf3b1	100	95.382	Lepisosteus_oculatus
ENSMALG00000017211	sf3b1	100	93.541	ENSLAFG00000001956	SF3B1	100	93.541	Loxodonta_africana
ENSMALG00000017211	sf3b1	99	93.497	ENSMMUG00000022430	SF3B1	99	93.497	Macaca_mulatta
ENSMALG00000017211	sf3b1	100	93.541	ENSMNEG00000042333	SF3B1	100	94.777	Macaca_nemestrina
ENSMALG00000017211	sf3b1	94	88.853	ENSMLEG00000026141	SF3B1	98	88.728	Mandrillus_leucophaeus
ENSMALG00000017211	sf3b1	100	99.011	ENSMAMG00000010241	sf3b1	100	99.011	Mastacembelus_armatus
ENSMALG00000017211	sf3b1	100	97.717	ENSMZEG00005021254	sf3b1	100	97.717	Maylandia_zebra
ENSMALG00000017211	sf3b1	99	93.257	ENSMGAG00000007017	SF3B1	99	93.257	Meleagris_gallopavo
ENSMALG00000017211	sf3b1	99	89.288	ENSMAUG00000009071	Sf3b1	99	89.288	Mesocricetus_auratus
ENSMALG00000017211	sf3b1	100	93.541	ENSMICG00000013879	SF3B1	100	93.541	Microcebus_murinus
ENSMALG00000017211	sf3b1	99	89.220	ENSMOCG00000000455	Sf3b1	99	89.220	Microtus_ochrogaster
ENSMALG00000017211	sf3b1	84	98.180	ENSMMOG00000000475	sf3b1	100	98.180	Mola_mola
ENSMALG00000017211	sf3b1	100	93.085	ENSMODG00000012275	SF3B1	100	93.085	Monodelphis_domestica
ENSMALG00000017211	sf3b1	100	93.541	MGP_CAROLIEiJ_G0014141	Sf3b1	100	93.541	Mus_caroli
ENSMALG00000017211	sf3b1	100	93.541	ENSMUSG00000025982	Sf3b1	100	93.541	Mus_musculus
ENSMALG00000017211	sf3b1	100	93.541	MGP_SPRETEiJ_G0014947	Sf3b1	100	93.541	Mus_spretus
ENSMALG00000017211	sf3b1	100	93.541	ENSMPUG00000007799	SF3B1	100	93.541	Mustela_putorius_furo
ENSMALG00000017211	sf3b1	100	92.401	ENSMLUG00000000840	SF3B1	100	92.401	Myotis_lucifugus
ENSMALG00000017211	sf3b1	99	93.216	ENSNGAG00000021884	-	100	93.216	Nannospalax_galili
ENSMALG00000017211	sf3b1	100	92.483	ENSNBRG00000015816	sf3b1	100	92.548	Neolamprologus_brichardi
ENSMALG00000017211	sf3b1	100	93.541	ENSNLEG00000006861	SF3B1	100	93.541	Nomascus_leucogenys
ENSMALG00000017211	sf3b1	69	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSMALG00000017211	sf3b1	100	81.115	ENSOPRG00000008596	SF3B1	100	81.338	Ochotona_princeps
ENSMALG00000017211	sf3b1	100	93.541	ENSODEG00000011153	-	100	93.541	Octodon_degus
ENSMALG00000017211	sf3b1	100	97.717	ENSONIG00000013758	sf3b1	100	97.717	Oreochromis_niloticus
ENSMALG00000017211	sf3b1	82	95.756	ENSOCUG00000012722	-	96	95.756	Oryctolagus_cuniculus
ENSMALG00000017211	sf3b1	100	97.717	ENSORLG00000020219	sf3b1	100	97.717	Oryzias_latipes
ENSMALG00000017211	sf3b1	100	97.717	ENSORLG00020001746	sf3b1	100	97.717	Oryzias_latipes_hni
ENSMALG00000017211	sf3b1	64	96.323	ENSORLG00015001759	sf3b1	98	96.323	Oryzias_latipes_hsok
ENSMALG00000017211	sf3b1	100	98.175	ENSOMEG00000019231	sf3b1	100	98.175	Oryzias_melastigma
ENSMALG00000017211	sf3b1	100	93.541	ENSOARG00000015374	SF3B1	100	93.541	Ovis_aries
ENSMALG00000017211	sf3b1	100	93.541	ENSPPAG00000035007	SF3B1	100	93.541	Pan_paniscus
ENSMALG00000017211	sf3b1	100	93.541	ENSPPRG00000009090	SF3B1	100	93.541	Panthera_pardus
ENSMALG00000017211	sf3b1	100	93.541	ENSPTIG00000021557	SF3B1	100	93.541	Panthera_tigris_altaica
ENSMALG00000017211	sf3b1	99	86.260	ENSPTRG00000012771	SF3B1	99	86.260	Pan_troglodytes
ENSMALG00000017211	sf3b1	100	93.541	ENSPANG00000013417	SF3B1	100	93.541	Papio_anubis
ENSMALG00000017211	sf3b1	100	96.431	ENSPKIG00000000784	sf3b1	100	96.431	Paramormyrops_kingsleyae
ENSMALG00000017211	sf3b1	99	92.715	ENSPSIG00000017222	SF3B1	98	92.715	Pelodiscus_sinensis
ENSMALG00000017211	sf3b1	91	97.313	ENSPMGG00000004330	sf3b1	99	97.313	Periophthalmus_magnuspinnatus
ENSMALG00000017211	sf3b1	99	93.497	ENSPEMG00000010699	Sf3b1	100	93.497	Peromyscus_maniculatus_bairdii
ENSMALG00000017211	sf3b1	100	88.662	ENSPMAG00000001311	sf3b1	100	88.964	Petromyzon_marinus
ENSMALG00000017211	sf3b1	100	93.161	ENSPCIG00000010642	SF3B1	100	93.161	Phascolarctos_cinereus
ENSMALG00000017211	sf3b1	100	98.176	ENSPFOG00000000073	sf3b1	100	98.176	Poecilia_formosa
ENSMALG00000017211	sf3b1	100	98.175	ENSPLAG00000002293	sf3b1	100	98.175	Poecilia_latipinna
ENSMALG00000017211	sf3b1	100	98.251	ENSPMEG00000000446	sf3b1	98	98.251	Poecilia_mexicana
ENSMALG00000017211	sf3b1	100	98.327	ENSPREG00000019652	sf3b1	100	98.327	Poecilia_reticulata
ENSMALG00000017211	sf3b1	82	96.676	ENSPPYG00000013044	SF3B1	95	96.676	Pongo_abelii
ENSMALG00000017211	sf3b1	100	93.389	ENSPCAG00000009292	SF3B1	100	93.389	Procavia_capensis
ENSMALG00000017211	sf3b1	100	93.541	ENSPCOG00000024074	SF3B1	100	93.541	Propithecus_coquereli
ENSMALG00000017211	sf3b1	100	93.541	ENSPVAG00000008302	SF3B1	100	93.541	Pteropus_vampyrus
ENSMALG00000017211	sf3b1	100	97.641	ENSPNYG00000014939	sf3b1	100	97.641	Pundamilia_nyererei
ENSMALG00000017211	sf3b1	100	96.809	ENSPNAG00000008288	sf3b1	100	96.809	Pygocentrus_nattereri
ENSMALG00000017211	sf3b1	100	93.541	ENSRNOG00000013516	Sf3b1	100	93.541	Rattus_norvegicus
ENSMALG00000017211	sf3b1	99	89.802	ENSRBIG00000026096	SF3B1	100	89.802	Rhinopithecus_bieti
ENSMALG00000017211	sf3b1	100	93.541	ENSRROG00000031308	SF3B1	100	93.541	Rhinopithecus_roxellana
ENSMALG00000017211	sf3b1	100	93.541	ENSSBOG00000020080	SF3B1	100	93.541	Saimiri_boliviensis_boliviensis
ENSMALG00000017211	sf3b1	100	93.085	ENSSHAG00000017564	SF3B1	100	93.085	Sarcophilus_harrisii
ENSMALG00000017211	sf3b1	100	96.578	ENSSFOG00015021535	sf3b1	100	96.578	Scleropages_formosus
ENSMALG00000017211	sf3b1	99	97.876	ENSSMAG00000013977	sf3b1	99	97.876	Scophthalmus_maximus
ENSMALG00000017211	sf3b1	100	98.630	ENSSDUG00000017422	sf3b1	100	98.630	Seriola_dumerili
ENSMALG00000017211	sf3b1	100	98.554	ENSSLDG00000019495	sf3b1	100	98.554	Seriola_lalandi_dorsalis
ENSMALG00000017211	sf3b1	75	98.592	ENSSARG00000007016	SF3B1	75	98.592	Sorex_araneus
ENSMALG00000017211	sf3b1	100	93.607	ENSSPUG00000000410	SF3B1	100	93.607	Sphenodon_punctatus
ENSMALG00000017211	sf3b1	100	99.163	ENSSPAG00000010451	sf3b1	99	99.163	Stegastes_partitus
ENSMALG00000017211	sf3b1	91	93.172	ENSSSCG00000016075	SF3B1	100	94.777	Sus_scrofa
ENSMALG00000017211	sf3b1	100	93.836	ENSTGUG00000010553	SF3B1	100	93.836	Taeniopygia_guttata
ENSMALG00000017211	sf3b1	100	97.945	ENSTRUG00000015534	sf3b1	100	97.945	Takifugu_rubripes
ENSMALG00000017211	sf3b1	84	96.901	ENSTBEG00000008714	SF3B1	93	96.901	Tupaia_belangeri
ENSMALG00000017211	sf3b1	92	93.173	ENSTTRG00000003414	SF3B1	92	93.173	Tursiops_truncatus
ENSMALG00000017211	sf3b1	94	83.740	ENSUAMG00000018506	SF3B1	99	97.571	Ursus_americanus
ENSMALG00000017211	sf3b1	100	93.541	ENSUMAG00000020945	SF3B1	100	93.541	Ursus_maritimus
ENSMALG00000017211	sf3b1	95	93.268	ENSVPAG00000005798	SF3B1	96	93.268	Vicugna_pacos
ENSMALG00000017211	sf3b1	100	93.541	ENSVVUG00000025948	SF3B1	95	93.541	Vulpes_vulpes
ENSMALG00000017211	sf3b1	100	92.097	ENSXETG00000013339	sf3b1	100	92.097	Xenopus_tropicalis
ENSMALG00000017211	sf3b1	100	93.764	ENSXCOG00000018086	sf3b1	100	94.068	Xiphophorus_couchianus
ENSMALG00000017211	sf3b1	100	98.251	ENSXMAG00000007369	sf3b1	100	98.251	Xiphophorus_maculatus