EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000017354 (Gene tree)
Gene ID: 109957623
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 184-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 5370 bases
Position: chrKV884716.1:1602519-1607888
Accession: 109957623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000024926	zf-C2H2	PF00096.26	3e-15	1	3
ENSMALP00000024926	zf-C2H2	PF00096.26	3e-15	2	3
ENSMALP00000024926	zf-C2H2	PF00096.26	3e-15	3	3
ENSMALP00000024931	zf-C2H2	PF00096.26	1.4e-14	1	2
ENSMALP00000024931	zf-C2H2	PF00096.26	1.4e-14	2	2
ENSMALP00000024931	zf-met	PF12874.7	4.4e-05	1	2
ENSMALP00000024931	zf-met	PF12874.7	4.4e-05	2	2
ENSMALP00000024926	zf-met	PF12874.7	8e-05	1	2
ENSMALP00000024926	zf-met	PF12874.7	8e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000025395	-	2553	-	ENSMALP00000024926	558 (aa)	-	-
ENSMALT00000025401	-	2518	XM_020595617	ENSMALP00000024931	701 (aa)	XP_020451273	UPI0009B48A5E

Gene Model

Click here to download ENSMALG00000017354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000017354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000017354	-	50	36.765	ENSMALG00000013323	-	82	41.111
ENSMALG00000017354	-	53	32.710	ENSMALG00000012856	-	88	32.710
ENSMALG00000017354	-	54	33.333	ENSMALG00000011969	-	76	33.333
ENSMALG00000017354	-	95	55.423	ENSMALG00000017313	-	90	55.401

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000017354	-	100	51.336	ENSAOCG00000011236	-	100	51.617	Amphiprion_ocellaris
ENSMALG00000017354	-	97	58.272	ENSAOCG00000011223	-	99	55.099	Amphiprion_ocellaris
ENSMALG00000017354	-	100	51.336	ENSAPEG00000007910	-	99	52.585	Amphiprion_percula
ENSMALG00000017354	-	97	58.272	ENSAPEG00000007889	-	86	84.921	Amphiprion_percula
ENSMALG00000017354	-	98	66.809	ENSATEG00000011955	-	100	66.667	Anabas_testudineus
ENSMALG00000017354	-	99	43.654	ENSCVAG00000009534	-	76	43.515	Cyprinodon_variegatus
ENSMALG00000017354	-	93	48.363	ENSKMAG00000011226	-	97	47.806	Kryptolebias_marmoratus
ENSMALG00000017354	-	92	51.420	ENSKMAG00000011235	-	92	51.201	Kryptolebias_marmoratus
ENSMALG00000017354	-	63	51.268	ENSKMAG00000011202	-	71	51.268	Kryptolebias_marmoratus
ENSMALG00000017354	-	63	64.211	ENSPMEG00000021927	-	96	64.211	Poecilia_mexicana
ENSMALG00000017354	-	51	65.714	ENSSMAG00000000404	-	90	65.823	Scophthalmus_maximus
ENSMALG00000017354	-	100	60.139	ENSSDUG00000009322	-	99	59.972	Seriola_dumerili
ENSMALG00000017354	-	100	66.900	ENSSDUG00000009314	-	100	66.620	Seriola_dumerili
ENSMALG00000017354	-	100	67.321	ENSSLDG00000012635	-	100	67.181	Seriola_lalandi_dorsalis
ENSMALG00000017354	-	63	55.143	ENSSPAG00000009405	-	87	53.143	Stegastes_partitus