EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000017775 (Gene tree)
Gene ID: 109971528
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 18825 bases
Position: chrKV884915.1:7745-26569
Accession: 109971528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000025606	Ribonuc_2-5A	PF06479.12	1.2e-40	1	1
ENSMALP00000025638	Ribonuc_2-5A	PF06479.12	1.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000026080	-	5343	XM_020619837	ENSMALP00000025606	1091 (aa)	XP_020475493	UPI0009B4288C
ENSMALT00000026113	-	3282	-	ENSMALP00000025638	1093 (aa)	-	-

Gene Model

Click here to download ENSMALG00000017775's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb04140	Autophagy - animal	KEGG
malb04141	Protein processing in endoplasmic reticulum	KEGG
malb04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000017775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000017775	ern1	85	54.640	ENSMALG00000002568	ern2	96	55.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000017775	ern1	96	87.640	ENSAPOG00000009999	ern1	100	86.526	Acanthochromis_polyacanthus
ENSMALG00000017775	ern1	98	86.484	ENSACIG00000021716	ern1	99	86.484	Amphilophus_citrinellus
ENSMALG00000017775	ern1	98	86.893	ENSAOCG00000012309	ern1	100	86.893	Amphiprion_ocellaris
ENSMALG00000017775	ern1	98	86.526	ENSAPEG00000011263	ern1	98	93.081	Amphiprion_percula
ENSMALG00000017775	ern1	98	87.477	ENSATEG00000024468	ern1	99	87.477	Anabas_testudineus
ENSMALG00000017775	ern1	98	86.667	ENSACLG00000027919	ern1	99	86.667	Astatotilapia_calliptera
ENSMALG00000017775	ern1	93	79.574	ENSAMXG00000000944	ern1	98	79.574	Astyanax_mexicanus
ENSMALG00000017775	ern1	94	86.355	ENSCSEG00000014500	ern1	99	86.479	Cynoglossus_semilaevis
ENSMALG00000017775	ern1	96	84.245	ENSCVAG00000002988	ern1	99	84.514	Cyprinodon_variegatus
ENSMALG00000017775	ern1	89	81.128	ENSDARG00000013997	ern1	100	81.386	Danio_rerio
ENSMALG00000017775	ern1	88	81.660	ENSELUG00000005957	ern1	93	81.865	Esox_lucius
ENSMALG00000017775	ern1	96	84.934	ENSFHEG00000005578	ern1	99	84.934	Fundulus_heteroclitus
ENSMALG00000017775	ern1	86	87.340	ENSGMOG00000011232	ern1	100	87.340	Gadus_morhua
ENSMALG00000017775	ern1	89	90.266	ENSGAFG00000020231	ern1	94	88.795	Gambusia_affinis
ENSMALG00000017775	ern1	86	90.360	ENSGACG00000011700	ern1	98	90.360	Gasterosteus_aculeatus
ENSMALG00000017775	ern1	97	85.886	ENSHBUG00000012581	ern1	99	86.210	Haplochromis_burtoni
ENSMALG00000017775	ern1	98	82.633	ENSHCOG00000016199	ern1	99	82.827	Hippocampus_comes
ENSMALG00000017775	ern1	92	80.119	ENSIPUG00000011083	ern1	96	80.119	Ictalurus_punctatus
ENSMALG00000017775	ern1	98	82.304	ENSKMAG00000019499	ern1	99	83.073	Kryptolebias_marmoratus
ENSMALG00000017775	ern1	96	83.349	ENSLBEG00000025907	ern1	99	83.349	Labrus_bergylta
ENSMALG00000017775	ern1	98	88.434	ENSMAMG00000023439	ern1	99	88.630	Mastacembelus_armatus
ENSMALG00000017775	ern1	98	86.667	ENSMZEG00005003221	ern1	99	86.667	Maylandia_zebra
ENSMALG00000017775	ern1	89	90.051	ENSMMOG00000007650	ern1	97	90.051	Mola_mola
ENSMALG00000017775	ern1	97	87.058	ENSNBRG00000002179	ern1	99	87.058	Neolamprologus_brichardi
ENSMALG00000017775	ern1	87	91.949	ENSONIG00000017169	ern1	98	91.949	Oreochromis_niloticus
ENSMALG00000017775	ern1	96	83.225	ENSORLG00000008940	ern1	100	83.225	Oryzias_latipes
ENSMALG00000017775	ern1	96	83.581	ENSORLG00020018387	ern1	100	83.581	Oryzias_latipes_hni
ENSMALG00000017775	ern1	96	83.395	ENSORLG00015007946	ern1	100	83.395	Oryzias_latipes_hsok
ENSMALG00000017775	ern1	96	84.323	ENSOMEG00000011741	ern1	100	84.323	Oryzias_melastigma
ENSMALG00000017775	ern1	89	81.333	ENSPKIG00000005593	ern1	98	81.250	Paramormyrops_kingsleyae
ENSMALG00000017775	ern1	99	83.012	ENSPMGG00000020442	ern1	99	85.659	Periophthalmus_magnuspinnatus
ENSMALG00000017775	ern1	89	90.574	ENSPFOG00000007378	ern1	91	90.574	Poecilia_formosa
ENSMALG00000017775	ern1	89	90.574	ENSPLAG00000014780	ern1	91	90.574	Poecilia_latipinna
ENSMALG00000017775	ern1	89	90.676	ENSPMEG00000016324	ern1	91	90.676	Poecilia_mexicana
ENSMALG00000017775	ern1	89	90.164	ENSPREG00000006286	ern1	91	90.164	Poecilia_reticulata
ENSMALG00000017775	ern1	98	86.667	ENSPNYG00000017929	ern1	99	89.729	Pundamilia_nyererei
ENSMALG00000017775	ern1	89	83.521	ENSPNAG00000029447	ern1	94	83.828	Pygocentrus_nattereri
ENSMALG00000017775	ern1	98	85.701	ENSSMAG00000015042	ern1	99	85.701	Scophthalmus_maximus
ENSMALG00000017775	ern1	98	89.416	ENSSDUG00000009098	ern1	99	89.416	Seriola_dumerili
ENSMALG00000017775	ern1	98	88.777	ENSSLDG00000023254	ern1	99	88.777	Seriola_lalandi_dorsalis
ENSMALG00000017775	ern1	98	87.052	ENSSPAG00000017539	ern1	99	87.300	Stegastes_partitus
ENSMALG00000017775	ern1	94	84.150	ENSTRUG00000001041	ern1	99	84.150	Takifugu_rubripes
ENSMALG00000017775	ern1	86	90.618	ENSTNIG00000017990	ern1	98	90.648	Tetraodon_nigroviridis
ENSMALG00000017775	ern1	87	91.579	ENSXCOG00000010330	ern1	94	91.579	Xiphophorus_couchianus
ENSMALG00000017775	ern1	89	90.574	ENSXMAG00000001310	ern1	91	90.574	Xiphophorus_maculatus