EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000017883 (Gene tree)
Gene ID: 109961087
Gene Symbol: zgc:171482
Alias: -
Full Name: zinc finger matrin-type protein 4-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 18565 bases
Position: chrKV884740.1:1245112-1263676
Accession: 109961087
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000025710	zf-met	PF12874.7	2.1e-26	1	4
ENSMALP00000025710	zf-met	PF12874.7	2.1e-26	2	4
ENSMALP00000025710	zf-met	PF12874.7	2.1e-26	3	4
ENSMALP00000025710	zf-met	PF12874.7	2.1e-26	4	4
ENSMALP00000025710	zf-C2H2_jaz	PF12171.8	2.6e-20	1	2
ENSMALP00000025710	zf-C2H2_jaz	PF12171.8	2.6e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000026186	-	690	XM_020601675	ENSMALP00000025710	229 (aa)	XP_020457331	-

Gene Model

Click here to download ENSMALG00000017883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000017883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000017883	zgc:171482	99	64.474	ENSMALG00000015056	zmat4a	86	63.158
ENSMALG00000017883	zgc:171482	97	42.478	ENSMALG00000010445	znf346	65	42.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000017883	zgc:171482	100	89.520	ENSAPOG00000019970	zgc:171482	100	89.083	Acanthochromis_polyacanthus
ENSMALG00000017883	zgc:171482	80	95.902	ENSACIG00000021512	zgc:171482	91	95.902	Amphilophus_citrinellus
ENSMALG00000017883	zgc:171482	80	95.122	ENSAOCG00000000751	zgc:171482	90	95.122	Amphiprion_ocellaris
ENSMALG00000017883	zgc:171482	80	95.122	ENSAPEG00000014154	zgc:171482	88	95.122	Amphiprion_percula
ENSMALG00000017883	zgc:171482	100	88.646	ENSATEG00000001371	zgc:171482	100	88.646	Anabas_testudineus
ENSMALG00000017883	zgc:171482	80	87.050	ENSACLG00000010511	zgc:171482	93	87.050	Astatotilapia_calliptera
ENSMALG00000017883	zgc:171482	100	82.969	ENSAMXG00000002299	zgc:171482	100	83.843	Astyanax_mexicanus
ENSMALG00000017883	zgc:171482	100	70.286	ENSCSEG00000006509	zgc:171482	100	94.118	Cynoglossus_semilaevis
ENSMALG00000017883	zgc:171482	100	90.830	ENSCVAG00000013606	zgc:171482	100	90.830	Cyprinodon_variegatus
ENSMALG00000017883	zgc:171482	99	84.979	ENSDARG00000074415	zgc:171482	99	97.778	Danio_rerio
ENSMALG00000017883	zgc:171482	80	92.683	ENSELUG00000021817	zgc:171482	94	87.786	Esox_lucius
ENSMALG00000017883	zgc:171482	81	65.775	ENSELUG00000017517	-	60	84.444	Esox_lucius
ENSMALG00000017883	zgc:171482	100	86.522	ENSFHEG00000002233	zgc:171482	100	87.336	Fundulus_heteroclitus
ENSMALG00000017883	zgc:171482	100	86.463	ENSGMOG00000010508	zgc:171482	100	85.590	Gadus_morhua
ENSMALG00000017883	zgc:171482	100	98.319	ENSGAFG00000009398	zgc:171482	100	98.319	Gambusia_affinis
ENSMALG00000017883	zgc:171482	100	90.086	ENSGACG00000007680	zgc:171482	100	90.086	Gasterosteus_aculeatus
ENSMALG00000017883	zgc:171482	80	95.935	ENSHBUG00000023289	zgc:171482	92	95.935	Haplochromis_burtoni
ENSMALG00000017883	zgc:171482	80	92.500	ENSHCOG00000018086	zgc:171482	90	92.500	Hippocampus_comes
ENSMALG00000017883	zgc:171482	80	94.872	ENSIPUG00000000361	zgc:171482	85	94.872	Ictalurus_punctatus
ENSMALG00000017883	zgc:171482	50	77.586	ENSIPUG00000000356	-	79	73.950	Ictalurus_punctatus
ENSMALG00000017883	zgc:171482	100	85.153	ENSKMAG00000005077	zgc:171482	86	84.716	Kryptolebias_marmoratus
ENSMALG00000017883	zgc:171482	80	95.868	ENSLBEG00000023823	zgc:171482	86	95.868	Labrus_bergylta
ENSMALG00000017883	zgc:171482	100	81.659	ENSLOCG00000008863	zgc:171482	97	81.034	Lepisosteus_oculatus
ENSMALG00000017883	zgc:171482	99	95.122	ENSMAMG00000001031	zgc:171482	77	95.122	Mastacembelus_armatus
ENSMALG00000017883	zgc:171482	100	87.336	ENSMZEG00005027721	zgc:171482	100	87.336	Maylandia_zebra
ENSMALG00000017883	zgc:171482	80	95.935	ENSMMOG00000010523	zgc:171482	97	95.935	Mola_mola
ENSMALG00000017883	zgc:171482	80	97.414	ENSNBRG00000021035	zgc:171482	87	97.414	Neolamprologus_brichardi
ENSMALG00000017883	zgc:171482	99	93.421	ENSONIG00000018365	zgc:171482	98	92.982	Oreochromis_niloticus
ENSMALG00000017883	zgc:171482	100	89.520	ENSORLG00000007607	zgc:171482	100	89.520	Oryzias_latipes
ENSMALG00000017883	zgc:171482	100	87.336	ENSORLG00020003563	zgc:171482	100	87.336	Oryzias_latipes_hni
ENSMALG00000017883	zgc:171482	100	89.520	ENSORLG00015008552	zgc:171482	100	89.520	Oryzias_latipes_hsok
ENSMALG00000017883	zgc:171482	80	95.122	ENSOMEG00000003526	zgc:171482	87	95.122	Oryzias_melastigma
ENSMALG00000017883	zgc:171482	55	88.889	ENSPKIG00000015911	-	84	94.828	Paramormyrops_kingsleyae
ENSMALG00000017883	zgc:171482	80	90.909	ENSPKIG00000016244	zgc:171482	82	88.696	Paramormyrops_kingsleyae
ENSMALG00000017883	zgc:171482	99	87.866	ENSPMGG00000020230	zgc:171482	100	86.192	Periophthalmus_magnuspinnatus
ENSMALG00000017883	zgc:171482	99	88.285	ENSPFOG00000001974	zgc:171482	96	87.029	Poecilia_formosa
ENSMALG00000017883	zgc:171482	100	90.393	ENSPLAG00000003327	zgc:171482	100	89.520	Poecilia_latipinna
ENSMALG00000017883	zgc:171482	99	95.122	ENSPMEG00000004988	zgc:171482	100	84.348	Poecilia_mexicana
ENSMALG00000017883	zgc:171482	80	95.122	ENSPREG00000019241	zgc:171482	89	95.122	Poecilia_reticulata
ENSMALG00000017883	zgc:171482	80	87.050	ENSPNYG00000007773	zgc:171482	93	87.050	Pundamilia_nyererei
ENSMALG00000017883	zgc:171482	99	83.117	ENSPNAG00000007619	zgc:171482	97	85.652	Pygocentrus_nattereri
ENSMALG00000017883	zgc:171482	80	85.156	ENSSFOG00015021238	zgc:171482	78	89.655	Scleropages_formosus
ENSMALG00000017883	zgc:171482	80	88.034	ENSSFOG00015016149	zgc:171482	94	88.034	Scleropages_formosus
ENSMALG00000017883	zgc:171482	80	95.122	ENSSMAG00000002715	zgc:171482	79	95.122	Scophthalmus_maximus
ENSMALG00000017883	zgc:171482	80	96.748	ENSSDUG00000008773	zgc:171482	87	96.748	Seriola_dumerili
ENSMALG00000017883	zgc:171482	80	96.748	ENSSLDG00000019510	zgc:171482	87	96.748	Seriola_lalandi_dorsalis
ENSMALG00000017883	zgc:171482	80	97.561	ENSSPAG00000013724	zgc:171482	98	97.561	Stegastes_partitus
ENSMALG00000017883	zgc:171482	85	92.683	ENSTRUG00000005705	zgc:171482	73	92.683	Takifugu_rubripes
ENSMALG00000017883	zgc:171482	100	79.476	ENSTNIG00000008679	zgc:171482	100	79.039	Tetraodon_nigroviridis
ENSMALG00000017883	zgc:171482	84	62.143	ENSXETG00000013525	zmat4	83	61.832	Xenopus_tropicalis
ENSMALG00000017883	zgc:171482	100	86.777	ENSXMAG00000002641	zgc:171482	100	64.000	Xiphophorus_maculatus