EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000018243 (Gene tree)
Gene ID: 109969807
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 12835 bases
Position: chrKV884870.1:1020388-1033222
Accession: 109969807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000026272	SAP	PF02037.27	2.7e-11	1	1
ENSMALP00000026293	SAP	PF02037.27	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000026774	-	7337	-	ENSMALP00000026293	781 (aa)	-	-
ENSMALT00000026753	-	7635	XM_020616981	ENSMALP00000026272	781 (aa)	XP_020472637	-

Gene Model

Click here to download ENSMALG00000018243's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000018243's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000018243	hnrnpub	95	40.759	ENSMALG00000009541	hnrnpul1	64	43.814
ENSMALG00000018243	hnrnpub	51	37.221	ENSMALG00000011564	si:ch211-107m4.1	70	37.221

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000018243	hnrnpub	84	61.486	ENSG00000153187	HNRNPU	99	66.333	Homo_sapiens
ENSMALG00000018243	hnrnpub	96	88.048	ENSAPOG00000017400	hnrnpub	96	88.318	Acanthochromis_polyacanthus
ENSMALG00000018243	hnrnpub	84	62.309	ENSAMEG00000009145	HNRNPU	74	70.588	Ailuropoda_melanoleuca
ENSMALG00000018243	hnrnpub	96	81.340	ENSACIG00000012138	hnrnpub	96	85.113	Amphilophus_citrinellus
ENSMALG00000018243	hnrnpub	96	89.376	ENSAOCG00000015843	hnrnpub	96	88.832	Amphiprion_ocellaris
ENSMALG00000018243	hnrnpub	96	89.376	ENSAPEG00000014679	hnrnpub	96	88.832	Amphiprion_percula
ENSMALG00000018243	hnrnpub	96	90.897	ENSATEG00000016178	hnrnpub	95	90.306	Anabas_testudineus
ENSMALG00000018243	hnrnpub	82	68.750	ENSACAG00000004511	HNRNPU	77	59.512	Anolis_carolinensis
ENSMALG00000018243	hnrnpub	75	61.318	ENSANAG00000033895	-	79	70.588	Aotus_nancymaae
ENSMALG00000018243	hnrnpub	98	86.252	ENSACLG00000008165	hnrnpub	96	87.063	Astatotilapia_calliptera
ENSMALG00000018243	hnrnpub	79	63.139	ENSBTAG00000007606	HNRNPU	79	70.588	Bos_taurus
ENSMALG00000018243	hnrnpub	84	61.149	ENSCJAG00000016914	HNRNPU	76	70.588	Callithrix_jacchus
ENSMALG00000018243	hnrnpub	75	61.655	ENSCAFG00020000918	HNRNPU	79	70.588	Canis_lupus_dingo
ENSMALG00000018243	hnrnpub	70	63.139	ENSCHIG00000004900	HNRNPU	79	70.588	Capra_hircus
ENSMALG00000018243	hnrnpub	79	63.316	ENSCPOG00000011887	HNRNPU	77	72.549	Cavia_porcellus
ENSMALG00000018243	hnrnpub	84	61.149	ENSCCAG00000037859	-	76	70.588	Cebus_capucinus
ENSMALG00000018243	hnrnpub	85	61.318	ENSCATG00000035273	HNRNPU	79	70.588	Cercocebus_atys
ENSMALG00000018243	hnrnpub	79	63.316	ENSCLAG00000007100	HNRNPU	77	72.549	Chinchilla_lanigera
ENSMALG00000018243	hnrnpub	75	61.318	ENSCSAG00000009219	HNRNPU	78	70.588	Chlorocebus_sabaeus
ENSMALG00000018243	hnrnpub	81	70.588	ENSCHOG00000001387	HNRNPU	74	70.588	Choloepus_hoffmanni
ENSMALG00000018243	hnrnpub	85	62.872	ENSCPBG00000009415	HNRNPU	78	62.687	Chrysemys_picta_bellii
ENSMALG00000018243	hnrnpub	85	61.318	ENSCANG00000022780	HNRNPU	75	70.588	Colobus_angolensis_palliatus
ENSMALG00000018243	hnrnpub	72	61.800	ENSCGRG00001020525	Hnrnpu	74	83.721	Cricetulus_griseus_chok1gshd
ENSMALG00000018243	hnrnpub	96	80.824	ENSCSEG00000010804	hnrnpub	99	75.399	Cynoglossus_semilaevis
ENSMALG00000018243	hnrnpub	95	70.687	ENSCVAG00000004280	hnrnpub	95	70.323	Cyprinodon_variegatus
ENSMALG00000018243	hnrnpub	98	61.211	ENSDARG00000015206	hnrnpua	80	65.354	Danio_rerio
ENSMALG00000018243	hnrnpub	98	62.121	ENSDARG00000004735	hnrnpub	97	60.723	Danio_rerio
ENSMALG00000018243	hnrnpub	96	55.291	ENSDNOG00000000215	HNRNPU	85	75.510	Dasypus_novemcinctus
ENSMALG00000018243	hnrnpub	70	63.139	ENSDORG00000015491	Hnrnpu	71	60.333	Dipodomys_ordii
ENSMALG00000018243	hnrnpub	85	61.318	ENSETEG00000014565	HNRNPU	76	70.588	Echinops_telfairi
ENSMALG00000018243	hnrnpub	76	61.194	ENSEASG00005003017	HNRNPU	72	59.230	Equus_asinus_asinus
ENSMALG00000018243	hnrnpub	76	61.028	ENSECAG00000007955	HNRNPU	72	59.069	Equus_caballus
ENSMALG00000018243	hnrnpub	97	74.564	ENSELUG00000010733	hnrnpub	95	75.619	Esox_lucius
ENSMALG00000018243	hnrnpub	70	62.787	ENSFCAG00000002156	HNRNPU	78	70.588	Felis_catus
ENSMALG00000018243	hnrnpub	82	72.549	ENSFDAG00000006026	HNRNPU	96	72.549	Fukomys_damarensis
ENSMALG00000018243	hnrnpub	99	79.597	ENSFHEG00000022639	hnrnpub	96	80.353	Fundulus_heteroclitus
ENSMALG00000018243	hnrnpub	92	77.793	ENSGMOG00000001755	hnrnpub	97	76.166	Gadus_morhua
ENSMALG00000018243	hnrnpub	76	65.036	ENSGALG00000010671	HNRNPU	77	64.179	Gallus_gallus
ENSMALG00000018243	hnrnpub	83	86.515	ENSGAFG00000009369	hnrnpub	96	80.875	Gambusia_affinis
ENSMALG00000018243	hnrnpub	96	79.777	ENSGACG00000004679	hnrnpub	97	80.149	Gasterosteus_aculeatus
ENSMALG00000018243	hnrnpub	84	61.486	ENSGGOG00000004061	HNRNPU	76	70.588	Gorilla_gorilla
ENSMALG00000018243	hnrnpub	98	86.252	ENSHBUG00000012290	hnrnpub	96	87.063	Haplochromis_burtoni
ENSMALG00000018243	hnrnpub	79	63.316	ENSHGLG00000010594	-	74	74.510	Heterocephalus_glaber_female
ENSMALG00000018243	hnrnpub	81	74.510	ENSHGLG00100015093	HNRNPU	96	74.510	Heterocephalus_glaber_male
ENSMALG00000018243	hnrnpub	97	72.727	ENSHCOG00000020091	hnrnpub	96	74.812	Hippocampus_comes
ENSMALG00000018243	hnrnpub	80	93.617	ENSIPUG00000007749	hnrnpu	96	81.356	Ictalurus_punctatus
ENSMALG00000018243	hnrnpub	75	83.721	ENSJJAG00000011371	Hnrnpu	76	83.721	Jaculus_jaculus
ENSMALG00000018243	hnrnpub	99	82.803	ENSKMAG00000004532	hnrnpub	96	84.117	Kryptolebias_marmoratus
ENSMALG00000018243	hnrnpub	99	88.408	ENSLBEG00000022520	hnrnpub	96	88.408	Labrus_bergylta
ENSMALG00000018243	hnrnpub	70	56.415	ENSLACG00000017463	HNRNPU	80	68.852	Latimeria_chalumnae
ENSMALG00000018243	hnrnpub	86	89.796	ENSLOCG00000016652	hnrnpua	97	64.464	Lepisosteus_oculatus
ENSMALG00000018243	hnrnpub	91	54.710	ENSLAFG00000021377	HNRNPU	76	70.588	Loxodonta_africana
ENSMALG00000018243	hnrnpub	85	61.318	ENSMFAG00000037308	HNRNPU	79	70.588	Macaca_fascicularis
ENSMALG00000018243	hnrnpub	75	61.318	ENSMMUG00000021098	HNRNPU	78	70.588	Macaca_mulatta
ENSMALG00000018243	hnrnpub	85	61.318	ENSMNEG00000043645	HNRNPU	79	70.588	Macaca_nemestrina
ENSMALG00000018243	hnrnpub	99	91.774	ENSMAMG00000007196	hnrnpub	96	91.388	Mastacembelus_armatus
ENSMALG00000018243	hnrnpub	98	86.122	ENSMZEG00005003185	hnrnpub	96	86.934	Maylandia_zebra
ENSMALG00000018243	hnrnpub	82	62.093	ENSMAUG00000008842	Hnrnpu	78	83.721	Mesocricetus_auratus
ENSMALG00000018243	hnrnpub	85	61.655	ENSMICG00000004616	HNRNPU	76	70.588	Microcebus_murinus
ENSMALG00000018243	hnrnpub	91	53.401	ENSMOCG00000015623	Hnrnpu	78	83.721	Microtus_ochrogaster
ENSMALG00000018243	hnrnpub	81	75.510	ENSMODG00000006515	HNRNPU	75	75.510	Monodelphis_domestica
ENSMALG00000018243	hnrnpub	70	63.074	ENSMUSG00000039630	Hnrnpu	79	83.721	Mus_musculus
ENSMALG00000018243	hnrnpub	75	83.721	MGP_PahariEiJ_G0028193	Hnrnpu	97	52.451	Mus_pahari
ENSMALG00000018243	hnrnpub	70	63.074	MGP_SPRETEiJ_G0015761	Hnrnpu	78	83.721	Mus_spretus
ENSMALG00000018243	hnrnpub	91	61.000	ENSMLUG00000000475	HNRNPU	78	68.627	Myotis_lucifugus
ENSMALG00000018243	hnrnpub	70	63.139	ENSNGAG00000019075	Hnrnpu	73	58.909	Nannospalax_galili
ENSMALG00000018243	hnrnpub	98	86.122	ENSNBRG00000017855	hnrnpub	96	86.934	Neolamprologus_brichardi
ENSMALG00000018243	hnrnpub	81	75.510	ENSMEUG00000000541	HNRNPU	76	75.510	Notamacropus_eugenii
ENSMALG00000018243	hnrnpub	98	85.826	ENSONIG00000001260	hnrnpub	96	85.436	Oreochromis_niloticus
ENSMALG00000018243	hnrnpub	84	61.824	ENSOCUG00000014469	HNRNPU	72	70.588	Oryctolagus_cuniculus
ENSMALG00000018243	hnrnpub	99	84.278	ENSORLG00000016114	hnrnpub	96	84.536	Oryzias_latipes
ENSMALG00000018243	hnrnpub	99	84.536	ENSORLG00020005363	hnrnpub	96	84.923	Oryzias_latipes_hni
ENSMALG00000018243	hnrnpub	99	84.278	ENSORLG00015001190	hnrnpub	96	84.794	Oryzias_latipes_hsok
ENSMALG00000018243	hnrnpub	99	84.903	ENSOMEG00000014951	hnrnpub	96	85.548	Oryzias_melastigma
ENSMALG00000018243	hnrnpub	75	61.486	ENSOGAG00000014024	HNRNPU	72	58.909	Otolemur_garnettii
ENSMALG00000018243	hnrnpub	76	70.588	ENSOARG00000004985	HNRNPU	84	70.588	Ovis_aries
ENSMALG00000018243	hnrnpub	84	61.486	ENSPPAG00000038652	HNRNPU	79	70.588	Pan_paniscus
ENSMALG00000018243	hnrnpub	82	61.840	ENSPPRG00000002662	HNRNPU	76	70.588	Panthera_pardus
ENSMALG00000018243	hnrnpub	84	61.486	ENSPTRG00000002182	HNRNPU	79	70.588	Pan_troglodytes
ENSMALG00000018243	hnrnpub	88	56.809	ENSPANG00000011643	HNRNPU	79	70.588	Papio_anubis
ENSMALG00000018243	hnrnpub	98	67.087	ENSPKIG00000022332	hnrnpub	97	67.303	Paramormyrops_kingsleyae
ENSMALG00000018243	hnrnpub	98	67.252	ENSPKIG00000006885	hnrnpua	97	66.836	Paramormyrops_kingsleyae
ENSMALG00000018243	hnrnpub	81	75.510	ENSPCIG00000008657	HNRNPU	77	75.510	Phascolarctos_cinereus
ENSMALG00000018243	hnrnpub	99	83.036	ENSPFOG00000002908	hnrnpub	96	83.249	Poecilia_formosa
ENSMALG00000018243	hnrnpub	99	82.653	ENSPLAG00000004160	hnrnpub	96	82.995	Poecilia_latipinna
ENSMALG00000018243	hnrnpub	85	61.486	ENSPCOG00000018655	-	77	70.588	Propithecus_coquereli
ENSMALG00000018243	hnrnpub	75	57.119	ENSPCOG00000003883	-	74	57.742	Propithecus_coquereli
ENSMALG00000018243	hnrnpub	79	63.316	ENSPVAG00000002581	HNRNPU	76	70.588	Pteropus_vampyrus
ENSMALG00000018243	hnrnpub	98	86.511	ENSPNYG00000021642	hnrnpub	96	87.322	Pundamilia_nyererei
ENSMALG00000018243	hnrnpub	98	66.918	ENSPNAG00000001055	hnrnpub	97	65.609	Pygocentrus_nattereri
ENSMALG00000018243	hnrnpub	70	63.074	ENSRNOG00000033790	Hnrnpu	77	83.721	Rattus_norvegicus
ENSMALG00000018243	hnrnpub	75	60.473	ENSRBIG00000031519	HNRNPU	79	57.536	Rhinopithecus_bieti
ENSMALG00000018243	hnrnpub	86	60.596	ENSRROG00000041642	HNRNPU	78	70.588	Rhinopithecus_roxellana
ENSMALG00000018243	hnrnpub	98	66.834	ENSSFOG00015019004	hnrnpu	99	66.102	Scleropages_formosus
ENSMALG00000018243	hnrnpub	98	68.182	ENSSFOG00015001124	hnrnpub	78	74.224	Scleropages_formosus
ENSMALG00000018243	hnrnpub	80	91.125	ENSSMAG00000003607	hnrnpub	96	86.617	Scophthalmus_maximus
ENSMALG00000018243	hnrnpub	96	89.050	ENSSDUG00000005912	hnrnpub	96	90.458	Seriola_dumerili
ENSMALG00000018243	hnrnpub	96	89.356	ENSSLDG00000004899	hnrnpub	96	90.216	Seriola_lalandi_dorsalis
ENSMALG00000018243	hnrnpub	77	82.927	ENSSPUG00000011393	HNRNPU	78	61.765	Sphenodon_punctatus
ENSMALG00000018243	hnrnpub	96	87.750	ENSSPAG00000011853	hnrnpub	96	88.447	Stegastes_partitus
ENSMALG00000018243	hnrnpub	84	61.318	ENSSSCG00000010877	HNRNPU	79	70.588	Sus_scrofa
ENSMALG00000018243	hnrnpub	99	78.788	ENSTRUG00000007759	hnrnpub	96	80.479	Takifugu_rubripes
ENSMALG00000018243	hnrnpub	99	75.474	ENSTNIG00000009725	hnrnpub	94	78.067	Tetraodon_nigroviridis
ENSMALG00000018243	hnrnpub	84	61.655	ENSUAMG00000021120	HNRNPU	76	70.588	Ursus_americanus
ENSMALG00000018243	hnrnpub	91	55.186	ENSUMAG00000012322	HNRNPU	79	63.462	Ursus_maritimus
ENSMALG00000018243	hnrnpub	77	56.401	ENSVPAG00000010520	HNRNPU	79	70.588	Vicugna_pacos
ENSMALG00000018243	hnrnpub	75	61.655	ENSVVUG00000026524	HNRNPU	79	70.588	Vulpes_vulpes
ENSMALG00000018243	hnrnpub	88	52.400	ENSXETG00000011386	hnrnpu	75	55.521	Xenopus_tropicalis
ENSMALG00000018243	hnrnpub	99	82.107	ENSXMAG00000010356	hnrnpub	96	83.122	Xiphophorus_maculatus