EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000018270 (Gene tree)
Gene ID: 109968637
Gene Symbol: -
Alias: rbfox3
Full Name: RNA binding protein fox-1 homolog 3-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 490494 bases
Position: chrKV884844.1:439939-930432
Accession: 109968637
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000026344	Fox-1_C	PF12414.8	1.9e-44	1	1
ENSMALP00000026313	Fox-1_C	PF12414.8	1.9e-44	1	1
ENSMALP00000026329	Fox-1_C	PF12414.8	2.1e-44	1	1
ENSMALP00000026383	Fox-1_C	PF12414.8	8.9e-29	1	1
ENSMALP00000026383	RRM_1	PF00076.22	8.5e-19	1	1
ENSMALP00000026329	RRM_1	PF00076.22	1.1e-18	1	1
ENSMALP00000026313	RRM_1	PF00076.22	1.2e-18	1	1
ENSMALP00000026344	RRM_1	PF00076.22	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000026865	-	942	-	ENSMALP00000026383	313 (aa)	-	-
ENSMALT00000026825	-	1671	XM_020615036	ENSMALP00000026344	381 (aa)	XP_020470692	UPI0009B49B94
ENSMALT00000026794	-	1202	XM_020615034	ENSMALP00000026313	386 (aa)	XP_020470690	UPI0009B377C6
ENSMALT00000026854	-	790	-	ENSMALP00000026372	185 (aa)	-	-
ENSMALT00000026810	-	1629	-	ENSMALP00000026329	367 (aa)	-	-

Gene Model

Click here to download ENSMALG00000018270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000018270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000018270	-	55	65.823	ENSMALG00000000623	rbfox2	100	67.089
ENSMALG00000018270	-	98	61.934	ENSMALG00000003337	rbfox1	98	63.467
ENSMALG00000018270	-	100	83.106	ENSMALG00000020407	rbfox3b	100	82.289
ENSMALG00000018270	-	50	35.065	ENSMALG00000013020	-	52	35.065
ENSMALG00000018270	-	88	55.482	ENSMALG00000009384	rbfox1l	85	61.736

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000018270	-	85	89.655	ENSG00000167281	RBFOX3	99	89.333	Homo_sapiens
ENSMALG00000018270	-	90	87.589	ENSAPOG00000015658	-	95	74.479	Acanthochromis_polyacanthus
ENSMALG00000018270	-	100	84.514	ENSAPOG00000021630	rbfox3b	100	83.727	Acanthochromis_polyacanthus
ENSMALG00000018270	-	89	78.324	ENSAMEG00000014170	RBFOX3	98	72.423	Ailuropoda_melanoleuca
ENSMALG00000018270	-	91	78.205	ENSACIG00000003768	-	90	78.528	Amphilophus_citrinellus
ENSMALG00000018270	-	97	83.882	ENSACIG00000010817	rbfox3b	100	82.895	Amphilophus_citrinellus
ENSMALG00000018270	-	100	84.196	ENSAOCG00000012358	rbfox3b	100	83.379	Amphiprion_ocellaris
ENSMALG00000018270	-	100	89.918	ENSAOCG00000010786	-	98	89.730	Amphiprion_ocellaris
ENSMALG00000018270	-	100	75.477	ENSAPEG00000019081	rbfox3b	100	74.324	Amphiprion_percula
ENSMALG00000018270	-	91	85.390	ENSAPEG00000015891	-	89	81.944	Amphiprion_percula
ENSMALG00000018270	-	97	71.839	ENSATEG00000019945	rbfox3b	100	76.081	Anabas_testudineus
ENSMALG00000018270	-	95	80.192	ENSATEG00000023101	-	97	86.164	Anabas_testudineus
ENSMALG00000018270	-	98	81.717	ENSACAG00000016093	RBFOX3	100	80.886	Anolis_carolinensis
ENSMALG00000018270	-	82	90.000	ENSANAG00000023457	RBFOX3	100	79.747	Aotus_nancymaae
ENSMALG00000018270	-	100	83.990	ENSACLG00000020011	rbfox3b	100	83.758	Astatotilapia_calliptera
ENSMALG00000018270	-	100	90.463	ENSACLG00000025552	-	100	90.463	Astatotilapia_calliptera
ENSMALG00000018270	-	100	86.290	ENSAMXG00000037246	rbfox3a	100	86.290	Astyanax_mexicanus
ENSMALG00000018270	-	97	78.933	ENSAMXG00000042841	rbfox3b	100	78.090	Astyanax_mexicanus
ENSMALG00000018270	-	76	79.167	ENSBTAG00000006280	RBFOX3	82	87.500	Bos_taurus
ENSMALG00000018270	-	82	90.000	ENSCJAG00000009563	RBFOX3	93	77.961	Callithrix_jacchus
ENSMALG00000018270	-	66	90.083	ENSCAFG00000005547	RBFOX3	100	79.859	Canis_familiaris
ENSMALG00000018270	-	83	90.000	ENSCAFG00020008126	RBFOX3	100	71.353	Canis_lupus_dingo
ENSMALG00000018270	-	86	90.000	ENSCHIG00000009124	RBFOX3	100	71.353	Capra_hircus
ENSMALG00000018270	-	81	69.452	ENSTSYG00000029617	RBFOX3	84	89.583	Carlito_syrichta
ENSMALG00000018270	-	50	74.522	ENSCAPG00000010217	RBFOX3	100	75.581	Cavia_aperea
ENSMALG00000018270	-	92	65.352	ENSCPOG00000021703	RBFOX3	100	71.504	Cavia_porcellus
ENSMALG00000018270	-	82	90.000	ENSCCAG00000028450	RBFOX3	100	79.747	Cebus_capucinus
ENSMALG00000018270	-	92	79.585	ENSCATG00000018349	RBFOX3	100	81.013	Cercocebus_atys
ENSMALG00000018270	-	92	65.341	ENSCLAG00000006449	RBFOX3	100	72.414	Chinchilla_lanigera
ENSMALG00000018270	-	91	74.086	ENSCSAG00000002355	RBFOX3	100	81.013	Chlorocebus_sabaeus
ENSMALG00000018270	-	89	80.882	ENSCPBG00000010904	RBFOX3	100	80.952	Chrysemys_picta_bellii
ENSMALG00000018270	-	83	90.000	ENSCANG00000043120	RBFOX3	100	81.013	Colobus_angolensis_palliatus
ENSMALG00000018270	-	85	89.655	ENSCGRG00001019476	Rbfox3	100	71.693	Cricetulus_griseus_chok1gshd
ENSMALG00000018270	-	85	89.655	ENSCGRG00000003268	Rbfox3	100	71.693	Cricetulus_griseus_crigri
ENSMALG00000018270	-	100	68.548	ENSCSEG00000020606	RBFOX3	100	67.742	Cynoglossus_semilaevis
ENSMALG00000018270	-	100	91.008	ENSCSEG00000015567	RBFOX3	98	90.296	Cynoglossus_semilaevis
ENSMALG00000018270	-	96	82.796	ENSCVAG00000006882	rbfox3b	100	81.989	Cyprinodon_variegatus
ENSMALG00000018270	-	100	87.332	ENSDARG00000010083	rbfox3a	100	87.798	Danio_rerio
ENSMALG00000018270	-	99	73.312	ENSDARG00000074310	rbfox3b	98	74.236	Danio_rerio
ENSMALG00000018270	-	58	83.889	ENSDNOG00000039391	RBFOX3	62	90.164	Dasypus_novemcinctus
ENSMALG00000018270	-	92	57.429	ENSDORG00000005352	Rbfox3	81	85.417	Dipodomys_ordii
ENSMALG00000018270	-	81	57.414	ENSEBUG00000013559	RBFOX3	88	56.329	Eptatretus_burgeri
ENSMALG00000018270	-	99	63.798	ENSEBUG00000002129	RBFOX3	99	69.296	Eptatretus_burgeri
ENSMALG00000018270	-	91	74.917	ENSEASG00005005059	RBFOX3	100	82.334	Equus_asinus_asinus
ENSMALG00000018270	-	95	73.333	ENSECAG00000023811	RBFOX3	100	82.650	Equus_caballus
ENSMALG00000018270	-	78	86.275	ENSEEUG00000013974	RBFOX3	76	89.333	Erinaceus_europaeus
ENSMALG00000018270	-	100	83.727	ENSELUG00000017963	rbfox3b	100	82.940	Esox_lucius
ENSMALG00000018270	-	98	81.492	ENSFCAG00000002555	RBFOX3	100	81.212	Felis_catus
ENSMALG00000018270	-	89	66.852	ENSFALG00000012288	RBFOX3	99	61.787	Ficedula_albicollis
ENSMALG00000018270	-	92	60.169	ENSFDAG00000007489	RBFOX3	100	66.491	Fukomys_damarensis
ENSMALG00000018270	-	96	70.476	ENSFHEG00000008550	rbfox3b	100	74.841	Fundulus_heteroclitus
ENSMALG00000018270	-	97	86.538	ENSGMOG00000019304	-	91	74.671	Gadus_morhua
ENSMALG00000018270	-	98	83.333	ENSGALG00000032889	RBFOX3	100	82.222	Gallus_gallus
ENSMALG00000018270	-	100	77.384	ENSGAFG00000005025	rbfox3b	100	76.882	Gambusia_affinis
ENSMALG00000018270	-	93	92.308	ENSGACG00000002138	-	100	79.365	Gasterosteus_aculeatus
ENSMALG00000018270	-	98	81.283	ENSGAGG00000020025	RBFOX3	100	81.818	Gopherus_agassizii
ENSMALG00000018270	-	86	90.000	ENSGGOG00000012546	RBFOX3	100	81.013	Gorilla_gorilla
ENSMALG00000018270	-	100	83.990	ENSHBUG00000018099	rbfox3b	100	83.465	Haplochromis_burtoni
ENSMALG00000018270	-	97	84.326	ENSHBUG00000023098	-	99	89.855	Haplochromis_burtoni
ENSMALG00000018270	-	92	64.607	ENSHGLG00000008679	RBFOX3	100	71.391	Heterocephalus_glaber_female
ENSMALG00000018270	-	92	61.127	ENSHGLG00100014739	RBFOX3	100	68.241	Heterocephalus_glaber_male
ENSMALG00000018270	-	95	71.935	ENSHCOG00000007444	RBFOX3	94	72.358	Hippocampus_comes
ENSMALG00000018270	-	97	81.908	ENSHCOG00000001863	RBFOX3	93	81.908	Hippocampus_comes
ENSMALG00000018270	-	100	85.422	ENSIPUG00000012010	rbfox3a	100	85.422	Ictalurus_punctatus
ENSMALG00000018270	-	97	66.265	ENSIPUG00000021966	rbfox3b	98	76.515	Ictalurus_punctatus
ENSMALG00000018270	-	92	64.746	ENSSTOG00000026817	RBFOX3	100	66.766	Ictidomys_tridecemlineatus
ENSMALG00000018270	-	85	89.655	ENSJJAG00000014167	Rbfox3	84	87.500	Jaculus_jaculus
ENSMALG00000018270	-	100	83.924	ENSKMAG00000006726	rbfox3b	100	83.106	Kryptolebias_marmoratus
ENSMALG00000018270	-	100	84.777	ENSLBEG00000004030	rbfox3b	100	83.990	Labrus_bergylta
ENSMALG00000018270	-	100	95.913	ENSLBEG00000022508	-	100	95.913	Labrus_bergylta
ENSMALG00000018270	-	50	59.239	ENSLACG00000000021	-	95	58.696	Latimeria_chalumnae
ENSMALG00000018270	-	94	69.643	ENSLACG00000018409	-	100	69.114	Latimeria_chalumnae
ENSMALG00000018270	-	89	89.264	ENSLOCG00000012267	rbfox3a	98	89.264	Lepisosteus_oculatus
ENSMALG00000018270	-	89	86.275	ENSLAFG00000016623	RBFOX3	100	71.809	Loxodonta_africana
ENSMALG00000018270	-	92	64.179	ENSMFAG00000002247	RBFOX3	83	87.500	Macaca_fascicularis
ENSMALG00000018270	-	85	89.655	ENSMMUG00000023028	RBFOX3	100	81.013	Macaca_mulatta
ENSMALG00000018270	-	91	74.419	ENSMNEG00000041147	RBFOX3	100	81.329	Macaca_nemestrina
ENSMALG00000018270	-	91	74.086	ENSMLEG00000025686	RBFOX3	100	81.013	Mandrillus_leucophaeus
ENSMALG00000018270	-	97	80.263	ENSMAMG00000019810	rbfox3b	100	79.276	Mastacembelus_armatus
ENSMALG00000018270	-	92	88.294	ENSMAMG00000020600	-	99	87.679	Mastacembelus_armatus
ENSMALG00000018270	-	100	83.990	ENSMZEG00005000781	rbfox3b	100	83.465	Maylandia_zebra
ENSMALG00000018270	-	99	67.359	ENSMZEG00005003055	-	78	73.822	Maylandia_zebra
ENSMALG00000018270	-	62	77.949	ENSMGAG00000005600	RBFOX3	83	78.733	Meleagris_gallopavo
ENSMALG00000018270	-	92	64.589	ENSMAUG00000013543	Rbfox3	100	71.353	Mesocricetus_auratus
ENSMALG00000018270	-	90	90.000	ENSMICG00000014898	RBFOX3	96	81.126	Microcebus_murinus
ENSMALG00000018270	-	85	89.655	ENSMOCG00000015373	Rbfox3	84	89.583	Microtus_ochrogaster
ENSMALG00000018270	-	100	79.730	ENSMMOG00000020193	rbfox3b	100	80.749	Mola_mola
ENSMALG00000018270	-	98	81.717	ENSMODG00000002089	RBFOX3	100	81.163	Monodelphis_domestica
ENSMALG00000018270	-	92	76.721	MGP_CAROLIEiJ_G0017487	Rbfox3	96	90.647	Mus_caroli
ENSMALG00000018270	-	92	76.393	ENSMUSG00000025576	Rbfox3	96	90.647	Mus_musculus
ENSMALG00000018270	-	85	93.103	MGP_PahariEiJ_G0018614	Rbfox3	96	90.647	Mus_pahari
ENSMALG00000018270	-	85	93.103	MGP_SPRETEiJ_G0018331	Rbfox3	96	90.647	Mus_spretus
ENSMALG00000018270	-	90	74.737	ENSMPUG00000012319	RBFOX3	99	73.822	Mustela_putorius_furo
ENSMALG00000018270	-	85	93.103	ENSNGAG00000018006	Rbfox3	84	91.667	Nannospalax_galili
ENSMALG00000018270	-	96	80.914	ENSNBRG00000010102	rbfox3b	100	80.645	Neolamprologus_brichardi
ENSMALG00000018270	-	97	84.539	ENSNBRG00000022885	-	92	81.194	Neolamprologus_brichardi
ENSMALG00000018270	-	96	56.678	ENSNLEG00000000153	-	93	57.192	Nomascus_leucogenys
ENSMALG00000018270	-	88	81.250	ENSMEUG00000004218	-	83	87.500	Notamacropus_eugenii
ENSMALG00000018270	-	69	81.967	ENSOPRG00000016279	-	79	76.684	Ochotona_princeps
ENSMALG00000018270	-	91	76.821	ENSODEG00000009433	RBFOX3	100	82.595	Octodon_degus
ENSMALG00000018270	-	96	85.079	ENSONIG00000007282	-	98	88.358	Oreochromis_niloticus
ENSMALG00000018270	-	96	83.065	ENSONIG00000009549	rbfox3b	100	82.258	Oreochromis_niloticus
ENSMALG00000018270	-	78	55.518	ENSOCUG00000014217	RBFOX3	60	85.246	Oryctolagus_cuniculus
ENSMALG00000018270	-	100	84.196	ENSORLG00000000905	rbfox3b	79	82.834	Oryzias_latipes
ENSMALG00000018270	-	100	84.196	ENSORLG00020018030	rbfox3b	99	82.834	Oryzias_latipes_hni
ENSMALG00000018270	-	100	83.924	ENSORLG00015009200	rbfox3b	99	83.106	Oryzias_latipes_hsok
ENSMALG00000018270	-	80	78.065	ENSOMEG00000014677	rbfox3b	86	77.982	Oryzias_melastigma
ENSMALG00000018270	-	89	82.121	ENSOGAG00000029595	RBFOX3	98	76.423	Otolemur_garnettii
ENSMALG00000018270	-	88	63.202	ENSOARG00000002908	RBFOX3	100	59.148	Ovis_aries
ENSMALG00000018270	-	73	77.826	ENSPPAG00000025383	RBFOX3	95	81.522	Pan_paniscus
ENSMALG00000018270	-	82	86.207	ENSPPRG00000007819	RBFOX3	100	70.787	Panthera_pardus
ENSMALG00000018270	-	86	90.000	ENSPTRG00000009727	RBFOX3	100	81.013	Pan_troglodytes
ENSMALG00000018270	-	91	74.086	ENSPANG00000019837	RBFOX3	100	81.013	Papio_anubis
ENSMALG00000018270	-	98	67.914	ENSPKIG00000022633	-	100	67.109	Paramormyrops_kingsleyae
ENSMALG00000018270	-	100	87.629	ENSPKIG00000010299	rbfox3a	99	86.744	Paramormyrops_kingsleyae
ENSMALG00000018270	-	87	79.567	ENSPMGG00000008000	rbfox3b	100	80.805	Periophthalmus_magnuspinnatus
ENSMALG00000018270	-	85	89.655	ENSPEMG00000010500	Rbfox3	83	89.583	Peromyscus_maniculatus_bairdii
ENSMALG00000018270	-	50	75.490	ENSPMAG00000008689	rbfox3b	99	77.451	Petromyzon_marinus
ENSMALG00000018270	-	98	71.324	ENSPCIG00000005766	RBFOX3	100	71.746	Phascolarctos_cinereus
ENSMALG00000018270	-	100	83.161	ENSPFOG00000018294	rbfox3b	100	82.383	Poecilia_formosa
ENSMALG00000018270	-	77	87.083	ENSPLAG00000000481	rbfox3b	79	84.170	Poecilia_latipinna
ENSMALG00000018270	-	96	70.159	ENSPMEG00000022997	rbfox3b	100	74.522	Poecilia_mexicana
ENSMALG00000018270	-	100	83.424	ENSPREG00000012886	rbfox3b	100	83.288	Poecilia_reticulata
ENSMALG00000018270	-	89	69.883	ENSPPYG00000008704	RBFOX3	100	69.298	Pongo_abelii
ENSMALG00000018270	-	82	89.655	ENSPCAG00000001401	RBFOX3	84	89.583	Procavia_capensis
ENSMALG00000018270	-	87	90.000	ENSPCOG00000012689	RBFOX3	80	87.500	Propithecus_coquereli
ENSMALG00000018270	-	82	89.655	ENSPVAG00000015243	RBFOX3	84	85.714	Pteropus_vampyrus
ENSMALG00000018270	-	99	85.852	ENSPNYG00000009079	-	97	84.595	Pundamilia_nyererei
ENSMALG00000018270	-	100	73.025	ENSPNYG00000010414	rbfox3b	100	72.973	Pundamilia_nyererei
ENSMALG00000018270	-	97	66.667	ENSPNAG00000018173	rbfox3b	91	66.997	Pygocentrus_nattereri
ENSMALG00000018270	-	100	86.269	ENSPNAG00000002889	rbfox3a	100	86.737	Pygocentrus_nattereri
ENSMALG00000018270	-	83	90.625	ENSRNOG00000003386	Rbfox3	100	82.334	Rattus_norvegicus
ENSMALG00000018270	-	98	80.939	ENSRBIG00000040449	RBFOX3	100	80.387	Rhinopithecus_bieti
ENSMALG00000018270	-	91	74.086	ENSRROG00000000766	RBFOX3	100	81.013	Rhinopithecus_roxellana
ENSMALG00000018270	-	82	89.655	ENSSBOG00000031591	RBFOX3	100	79.747	Saimiri_boliviensis_boliviensis
ENSMALG00000018270	-	89	74.930	ENSSHAG00000016076	RBFOX3	100	71.746	Sarcophilus_harrisii
ENSMALG00000018270	-	100	87.629	ENSSFOG00015023260	rbfox3a	100	87.629	Scleropages_formosus
ENSMALG00000018270	-	98	68.044	ENSSFOG00015004716	RBFOX3	100	69.972	Scleropages_formosus
ENSMALG00000018270	-	100	90.736	ENSSMAG00000019052	-	100	91.083	Scophthalmus_maximus
ENSMALG00000018270	-	100	76.555	ENSSMAG00000012618	rbfox3b	87	78.663	Scophthalmus_maximus
ENSMALG00000018270	-	100	88.011	ENSSDUG00000015801	-	99	87.332	Seriola_dumerili
ENSMALG00000018270	-	96	70.476	ENSSDUG00000023183	rbfox3b	100	74.841	Seriola_dumerili
ENSMALG00000018270	-	100	84.469	ENSSLDG00000000149	rbfox3b	100	83.651	Seriola_lalandi_dorsalis
ENSMALG00000018270	-	98	93.831	ENSSLDG00000016098	-	99	90.836	Seriola_lalandi_dorsalis
ENSMALG00000018270	-	98	71.944	ENSSPUG00000011733	RBFOX3	99	82.278	Sphenodon_punctatus
ENSMALG00000018270	-	100	76.294	ENSSPAG00000017571	rbfox3b	100	75.405	Stegastes_partitus
ENSMALG00000018270	-	83	79.487	ENSSPAG00000004898	-	85	86.411	Stegastes_partitus
ENSMALG00000018270	-	83	79.562	ENSSSCG00000039498	RBFOX3	100	73.574	Sus_scrofa
ENSMALG00000018270	-	97	73.394	ENSTRUG00000004894	rbfox3b	99	77.746	Takifugu_rubripes
ENSMALG00000018270	-	97	70.000	ENSTNIG00000011278	rbfox3b	99	70.603	Tetraodon_nigroviridis
ENSMALG00000018270	-	76	73.077	ENSTBEG00000004296	-	100	49.198	Tupaia_belangeri
ENSMALG00000018270	-	85	89.655	ENSTTRG00000003676	RBFOX3	84	87.500	Tursiops_truncatus
ENSMALG00000018270	-	91	75.083	ENSUAMG00000004668	RBFOX3	100	81.962	Ursus_americanus
ENSMALG00000018270	-	98	81.768	ENSVVUG00000017864	RBFOX3	100	81.329	Vulpes_vulpes
ENSMALG00000018270	-	98	57.267	ENSXETG00000020236	rbfox3	98	61.795	Xenopus_tropicalis
ENSMALG00000018270	-	96	83.333	ENSXCOG00000018262	rbfox3b	100	82.333	Xiphophorus_couchianus
ENSMALG00000018270	-	100	85.039	ENSXMAG00000012939	rbfox3b	100	84.252	Xiphophorus_maculatus