EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000018436 (Gene tree)
Gene ID: 109968655
Gene Symbol: RAB29
Alias: RAB7L|RAB7L1
Full Name: ras-related protein Rab-7L1-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 7569 bases
Position: chrKV884845.1:135608-143176
Accession: 109968655
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000026570	MMR_HSR1	PF01926.23	1.8e-05	1	1
ENSMALP00000026558	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000027043	RAB29-201	956	-	ENSMALP00000026558	245 (aa)	-	-
ENSMALT00000027056	RAB29-202	2202	XM_020615061	ENSMALP00000026570	228 (aa)	XP_020470717	UPI0009B4CDE0

Gene Model

Click here to download ENSMALG00000018436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000018436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000018436	RAB29	75	34.503	ENSMALG00000021928	rab15	77	35.882
ENSMALG00000018436	RAB29	73	30.539	ENSMALG00000022348	-	74	31.548
ENSMALG00000018436	RAB29	74	35.882	ENSMALG00000018973	RAB39B	78	35.882
ENSMALG00000018436	RAB29	76	36.517	ENSMALG00000003956	-	90	34.500
ENSMALG00000018436	RAB29	90	36.893	ENSMALG00000015936	RAB9A	92	36.893
ENSMALG00000018436	RAB29	77	39.205	ENSMALG00000006985	-	86	37.569
ENSMALG00000018436	RAB29	76	30.636	ENSMALG00000022118	rab14	76	30.636
ENSMALG00000018436	RAB29	73	35.928	ENSMALG00000005069	rab18b	82	34.104
ENSMALG00000018436	RAB29	80	34.759	ENSMALG00000012630	rab33a	80	34.759
ENSMALG00000018436	RAB29	79	37.222	ENSMALG00000012506	rab9a	86	37.222
ENSMALG00000018436	RAB29	56	39.062	ENSMALG00000003712	zgc:101559	53	39.062
ENSMALG00000018436	RAB29	60	30.201	ENSMALG00000019758	rras2	69	33.607
ENSMALG00000018436	RAB29	78	35.676	ENSMALG00000013152	si:dkey-34d22.5	82	35.676
ENSMALG00000018436	RAB29	76	34.286	ENSMALG00000003050	rab11a	79	34.286
ENSMALG00000018436	RAB29	77	36.000	ENSMALG00000004053	RAB7A	84	36.000
ENSMALG00000018436	RAB29	69	33.544	ENSMALG00000014929	rab5aa	75	32.738
ENSMALG00000018436	RAB29	77	34.091	ENSMALG00000020364	-	82	34.091
ENSMALG00000018436	RAB29	79	35.912	ENSMALG00000012723	RAB39B	83	35.912
ENSMALG00000018436	RAB29	64	30.247	ENSMALG00000001189	dnajc27	58	30.247
ENSMALG00000018436	RAB29	56	30.147	ENSMALG00000019198	arl8a	68	30.147
ENSMALG00000018436	RAB29	72	30.539	ENSMALG00000014149	rhebl1	87	30.539
ENSMALG00000018436	RAB29	89	36.493	ENSMALG00000014727	si:dkey-16l2.16	96	36.493
ENSMALG00000018436	RAB29	88	31.188	ENSMALG00000010549	rab41	91	31.188
ENSMALG00000018436	RAB29	68	37.736	ENSMALG00000002136	rab23	76	38.554
ENSMALG00000018436	RAB29	76	33.143	ENSMALG00000022187	rab11bb	78	33.143
ENSMALG00000018436	RAB29	77	36.932	ENSMALG00000007664	rab9b	81	36.932
ENSMALG00000018436	RAB29	73	33.533	ENSMALG00000009813	rab18a	82	32.370
ENSMALG00000018436	RAB29	78	36.111	ENSMALG00000010438	rab30	86	36.111
ENSMALG00000018436	RAB29	69	37.107	ENSMALG00000022693	rab33ba	64	37.107
ENSMALG00000018436	RAB29	92	34.579	ENSMALG00000021144	rab1ba	100	34.579
ENSMALG00000018436	RAB29	50	30.088	ENSMALG00000015576	-	82	30.579
ENSMALG00000018436	RAB29	77	36.000	ENSMALG00000016312	RAB7A	84	36.000
ENSMALG00000018436	RAB29	81	38.503	ENSMALG00000020807	-	95	34.975
ENSMALG00000018436	RAB29	76	32.000	ENSMALG00000004093	rab11al	78	32.000
ENSMALG00000018436	RAB29	78	35.000	ENSMALG00000017417	rab6bb	83	35.000
ENSMALG00000018436	RAB29	85	46.667	ENSMALG00000013514	rab38b	88	46.667
ENSMALG00000018436	RAB29	57	32.308	ENSMALG00000013806	rab36	50	32.800
ENSMALG00000018436	RAB29	50	31.967	ENSMALG00000008164	arl8bb	61	31.967
ENSMALG00000018436	RAB29	73	32.143	ENSMALG00000004112	rab25b	78	32.143
ENSMALG00000018436	RAB29	77	37.912	ENSMALG00000021944	-	89	42.000
ENSMALG00000018436	RAB29	84	30.769	ENSMALG00000021949	rab11ba	93	30.769
ENSMALG00000018436	RAB29	77	36.571	ENSMALG00000021129	zgc:171927	80	36.571
ENSMALG00000018436	RAB29	72	32.597	ENSMALG00000015154	rab25a	82	32.597
ENSMALG00000018436	RAB29	67	30.488	ENSMALG00000005944	rabl2	70	30.488
ENSMALG00000018436	RAB29	77	39.205	ENSMALG00000012003	rab1ab	86	37.569
ENSMALG00000018436	RAB29	78	38.202	ENSMALG00000015762	rab12	71	38.202
ENSMALG00000018436	RAB29	60	36.429	ENSMALG00000018499	rab34b	51	36.429
ENSMALG00000018436	RAB29	75	33.721	ENSMALG00000015854	rab6ba	80	33.721
ENSMALG00000018436	RAB29	75	33.714	ENSMALG00000016038	RAB15	78	33.714
ENSMALG00000018436	RAB29	74	34.911	ENSMALG00000004342	rab2a	98	31.336
ENSMALG00000018436	RAB29	77	30.688	ENSMALG00000006052	rab5c	82	30.688
ENSMALG00000018436	RAB29	50	30.088	ENSMALG00000010254	RAP2B	89	30.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000018436	RAB29	90	81.553	ENSATEG00000024739	RAB29	100	81.553	Anabas_testudineus
ENSMALG00000018436	RAB29	72	86.061	ENSACLG00000008602	RAB29	100	86.061	Astatotilapia_calliptera
ENSMALG00000018436	RAB29	90	72.816	ENSCVAG00000014038	RAB29	100	72.816	Cyprinodon_variegatus
ENSMALG00000018436	RAB29	90	50.485	ENSEBUG00000002259	RAB29	98	50.485	Eptatretus_burgeri
ENSMALG00000018436	RAB29	78	73.034	ENSFHEG00000015993	RAB29	87	73.034	Fundulus_heteroclitus
ENSMALG00000018436	RAB29	72	76.364	ENSGMOG00000018475	RAB29	99	76.364	Gadus_morhua
ENSMALG00000018436	RAB29	89	74.510	ENSGAFG00000000629	RAB29	99	74.510	Gambusia_affinis
ENSMALG00000018436	RAB29	90	77.670	ENSGACG00000010473	RAB29	99	77.670	Gasterosteus_aculeatus
ENSMALG00000018436	RAB29	90	79.327	ENSHBUG00000012594	RAB29	100	79.327	Haplochromis_burtoni
ENSMALG00000018436	RAB29	85	74.227	ENSKMAG00000017150	-	87	74.227	Kryptolebias_marmoratus
ENSMALG00000018436	RAB29	90	80.583	ENSLBEG00000006152	-	100	80.583	Labrus_bergylta
ENSMALG00000018436	RAB29	90	80.583	ENSLBEG00000018812	RAB29	100	80.583	Labrus_bergylta
ENSMALG00000018436	RAB29	89	52.451	ENSLACG00000002523	RAB29	98	52.451	Latimeria_chalumnae
ENSMALG00000018436	RAB29	90	80.583	ENSMAMG00000006963	RAB29	100	80.583	Mastacembelus_armatus
ENSMALG00000018436	RAB29	90	78.365	ENSMZEG00005026799	RAB29	100	78.365	Maylandia_zebra
ENSMALG00000018436	RAB29	71	86.335	ENSNBRG00000008714	RAB29	71	86.335	Neolamprologus_brichardi
ENSMALG00000018436	RAB29	90	79.808	ENSONIG00000014892	RAB29	100	79.808	Oreochromis_niloticus
ENSMALG00000018436	RAB29	90	74.757	ENSORLG00000027892	RAB29	100	74.757	Oryzias_latipes
ENSMALG00000018436	RAB29	90	73.301	ENSORLG00020005240	RAB29	100	72.330	Oryzias_latipes_hni
ENSMALG00000018436	RAB29	90	73.786	ENSORLG00015020441	-	100	73.786	Oryzias_latipes_hsok
ENSMALG00000018436	RAB29	90	76.214	ENSOMEG00000000336	RAB29	100	76.214	Oryzias_melastigma
ENSMALG00000018436	RAB29	76	79.191	ENSPMGG00000008290	-	99	71.429	Periophthalmus_magnuspinnatus
ENSMALG00000018436	RAB29	89	70.098	ENSPFOG00000013066	RAB29	98	70.098	Poecilia_formosa
ENSMALG00000018436	RAB29	89	68.473	ENSPLAG00000002600	RAB29	95	68.473	Poecilia_latipinna
ENSMALG00000018436	RAB29	89	71.078	ENSPMEG00000021807	RAB29	99	71.078	Poecilia_mexicana
ENSMALG00000018436	RAB29	89	71.569	ENSPREG00000020276	RAB29	99	71.569	Poecilia_reticulata
ENSMALG00000018436	RAB29	90	78.365	ENSPNYG00000015355	RAB29	100	78.365	Pundamilia_nyererei
ENSMALG00000018436	RAB29	90	78.261	ENSSDUG00000006543	RAB29	100	78.261	Seriola_dumerili
ENSMALG00000018436	RAB29	75	58.480	ENSSPUG00000015007	RAB29	84	58.480	Sphenodon_punctatus
ENSMALG00000018436	RAB29	90	76.699	ENSSPAG00000002062	RAB29	100	76.699	Stegastes_partitus
ENSMALG00000018436	RAB29	89	75.000	ENSXCOG00000016370	RAB29	99	75.000	Xiphophorus_couchianus
ENSMALG00000018436	RAB29	89	75.490	ENSXMAG00000029823	RAB29	99	75.490	Xiphophorus_maculatus