EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000018442 (Gene tree)
Gene ID: 109973321
Gene Symbol: ptcd1
Alias: wu:fi36d06
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 5002 bases
Position: chrKV884976.1:329372-334373
Accession: 109973321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000026568	PPR	PF01535.20	2.6e-17	1	2
ENSMALP00000026568	PPR	PF01535.20	2.6e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000027054	-	3115	XM_020622816	ENSMALP00000026568	719 (aa)	XP_020478472	UPI0009B477BF

Gene Model

Click here to download ENSMALG00000018442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000018442's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000018442	ptcd1	80	49.412	ENSG00000248919	ATP5MF-PTCD1	78	50.084	Homo_sapiens
ENSMALG00000018442	ptcd1	80	49.412	ENSG00000106246	PTCD1	84	49.583	Homo_sapiens
ENSMALG00000018442	ptcd1	88	67.192	ENSAPOG00000010679	ptcd1	96	67.192	Acanthochromis_polyacanthus
ENSMALG00000018442	ptcd1	82	50.822	ENSAMEG00000006224	-	79	50.822	Ailuropoda_melanoleuca
ENSMALG00000018442	ptcd1	92	72.239	ENSACIG00000017861	ptcd1	97	72.239	Amphilophus_citrinellus
ENSMALG00000018442	ptcd1	99	68.150	ENSAOCG00000020741	-	96	69.565	Amphiprion_ocellaris
ENSMALG00000018442	ptcd1	88	69.764	ENSAOCG00000022617	ptcd1	94	69.764	Amphiprion_ocellaris
ENSMALG00000018442	ptcd1	99	68.428	ENSAPEG00000022632	ptcd1	96	69.855	Amphiprion_percula
ENSMALG00000018442	ptcd1	99	74.583	ENSATEG00000007016	ptcd1	100	74.722	Anabas_testudineus
ENSMALG00000018442	ptcd1	79	50.594	ENSAPLG00000006862	-	92	50.168	Anas_platyrhynchos
ENSMALG00000018442	ptcd1	80	49.493	ENSACAG00000012871	-	77	49.493	Anolis_carolinensis
ENSMALG00000018442	ptcd1	80	50.000	ENSANAG00000035790	-	86	50.167	Aotus_nancymaae
ENSMALG00000018442	ptcd1	99	70.874	ENSACLG00000002824	ptcd1	99	70.874	Astatotilapia_calliptera
ENSMALG00000018442	ptcd1	81	52.083	ENSAMXG00000037292	ptcd1	87	51.768	Astyanax_mexicanus
ENSMALG00000018442	ptcd1	88	47.655	ENSBTAG00000020440	-	81	47.655	Bos_taurus
ENSMALG00000018442	ptcd1	80	49.832	ENSCJAG00000015815	-	84	50.000	Callithrix_jacchus
ENSMALG00000018442	ptcd1	94	46.528	ENSCAFG00000015055	-	93	46.528	Canis_familiaris
ENSMALG00000018442	ptcd1	94	46.667	ENSCAFG00020014480	-	94	46.667	Canis_lupus_dingo
ENSMALG00000018442	ptcd1	88	46.796	ENSCHIG00000027000	-	93	46.796	Capra_hircus
ENSMALG00000018442	ptcd1	80	49.581	ENSTSYG00000029495	-	86	49.106	Carlito_syrichta
ENSMALG00000018442	ptcd1	81	47.635	ENSCAPG00000014660	-	92	48.124	Cavia_aperea
ENSMALG00000018442	ptcd1	80	49.327	ENSCPOG00000001780	-	86	48.940	Cavia_porcellus
ENSMALG00000018442	ptcd1	80	50.084	ENSCCAG00000034025	-	84	50.250	Cebus_capucinus
ENSMALG00000018442	ptcd1	80	49.745	ENSCATG00000040859	-	83	49.916	Cercocebus_atys
ENSMALG00000018442	ptcd1	90	47.507	ENSCLAG00000006354	-	95	47.801	Chinchilla_lanigera
ENSMALG00000018442	ptcd1	76	49.020	ENSCSAG00000017794	-	83	49.204	Chlorocebus_sabaeus
ENSMALG00000018442	ptcd1	86	46.786	ENSCPBG00000020866	-	90	46.786	Chrysemys_picta_bellii
ENSMALG00000018442	ptcd1	82	49.013	ENSCANG00000023441	-	86	49.013	Colobus_angolensis_palliatus
ENSMALG00000018442	ptcd1	81	48.918	ENSCGRG00001023686	Ptcd1	85	48.918	Cricetulus_griseus_chok1gshd
ENSMALG00000018442	ptcd1	81	48.918	ENSCGRG00000015031	Ptcd1	84	48.918	Cricetulus_griseus_crigri
ENSMALG00000018442	ptcd1	98	59.085	ENSCSEG00000002378	ptcd1	93	61.481	Cynoglossus_semilaevis
ENSMALG00000018442	ptcd1	92	65.554	ENSCVAG00000003621	ptcd1	98	65.554	Cyprinodon_variegatus
ENSMALG00000018442	ptcd1	99	65.352	ENSCVAG00000015826	ptcd1	98	65.385	Cyprinodon_variegatus
ENSMALG00000018442	ptcd1	83	53.045	ENSDARG00000076176	ptcd1	89	53.045	Danio_rerio
ENSMALG00000018442	ptcd1	80	49.750	ENSDNOG00000009957	-	95	46.657	Dasypus_novemcinctus
ENSMALG00000018442	ptcd1	80	49.576	ENSDORG00000000740	Ptcd1	96	46.757	Dipodomys_ordii
ENSMALG00000018442	ptcd1	83	37.355	ENSEBUG00000014515	ptcd1	98	36.553	Eptatretus_burgeri
ENSMALG00000018442	ptcd1	81	49.836	ENSEASG00005002480	-	84	49.836	Equus_asinus_asinus
ENSMALG00000018442	ptcd1	81	49.342	ENSECAG00000016617	-	84	49.507	Equus_caballus
ENSMALG00000018442	ptcd1	91	53.966	ENSELUG00000016517	ptcd1	94	53.966	Esox_lucius
ENSMALG00000018442	ptcd1	85	49.285	ENSFCAG00000015069	-	88	49.285	Felis_catus
ENSMALG00000018442	ptcd1	79	48.419	ENSFALG00000013803	-	83	48.435	Ficedula_albicollis
ENSMALG00000018442	ptcd1	80	49.916	ENSFDAG00000006393	-	84	49.670	Fukomys_damarensis
ENSMALG00000018442	ptcd1	78	70.410	ENSFHEG00000012491	ptcd1	97	70.232	Fundulus_heteroclitus
ENSMALG00000018442	ptcd1	86	64.331	ENSGMOG00000007639	ptcd1	97	64.851	Gadus_morhua
ENSMALG00000018442	ptcd1	79	49.088	ENSGALG00000004711	-	84	49.013	Gallus_gallus
ENSMALG00000018442	ptcd1	99	63.384	ENSGAFG00000013175	ptcd1	97	64.143	Gambusia_affinis
ENSMALG00000018442	ptcd1	89	70.295	ENSGACG00000016607	ptcd1	99	70.093	Gasterosteus_aculeatus
ENSMALG00000018442	ptcd1	79	47.218	ENSGAGG00000021832	-	88	47.386	Gopherus_agassizii
ENSMALG00000018442	ptcd1	80	49.244	ENSGGOG00000015123	-	84	49.416	Gorilla_gorilla
ENSMALG00000018442	ptcd1	99	70.874	ENSHBUG00000018275	ptcd1	99	70.874	Haplochromis_burtoni
ENSMALG00000018442	ptcd1	80	50.761	ENSHGLG00000017621	-	84	50.498	Heterocephalus_glaber_female
ENSMALG00000018442	ptcd1	80	50.761	ENSHGLG00100007218	-	84	50.498	Heterocephalus_glaber_male
ENSMALG00000018442	ptcd1	97	56.815	ENSHCOG00000010784	ptcd1	96	57.687	Hippocampus_comes
ENSMALG00000018442	ptcd1	84	49.686	ENSSTOG00000001682	-	89	49.686	Ictidomys_tridecemlineatus
ENSMALG00000018442	ptcd1	85	48.083	ENSJJAG00000000319	Ptcd1	88	49.035	Jaculus_jaculus
ENSMALG00000018442	ptcd1	94	68.622	ENSKMAG00000008708	ptcd1	95	68.429	Kryptolebias_marmoratus
ENSMALG00000018442	ptcd1	99	67.586	ENSLBEG00000008061	ptcd1	99	67.353	Labrus_bergylta
ENSMALG00000018442	ptcd1	80	49.661	ENSLACG00000011172	ptcd1	82	50.169	Latimeria_chalumnae
ENSMALG00000018442	ptcd1	80	53.038	ENSLOCG00000004833	ptcd1	92	52.470	Lepisosteus_oculatus
ENSMALG00000018442	ptcd1	81	49.175	ENSLAFG00000002588	-	95	46.154	Loxodonta_africana
ENSMALG00000018442	ptcd1	80	49.915	ENSMFAG00000041324	-	83	50.084	Macaca_fascicularis
ENSMALG00000018442	ptcd1	80	49.745	ENSMMUG00000030408	-	83	49.916	Macaca_mulatta
ENSMALG00000018442	ptcd1	80	49.915	ENSMNEG00000043786	-	83	50.084	Macaca_nemestrina
ENSMALG00000018442	ptcd1	80	36.833	ENSMLEG00000031179	-	81	39.145	Mandrillus_leucophaeus
ENSMALG00000018442	ptcd1	99	75.210	ENSMAMG00000007623	ptcd1	98	75.070	Mastacembelus_armatus
ENSMALG00000018442	ptcd1	99	70.539	ENSMZEG00005012722	ptcd1	99	70.735	Maylandia_zebra
ENSMALG00000018442	ptcd1	81	48.382	ENSMGAG00000004211	-	79	48.382	Meleagris_gallopavo
ENSMALG00000018442	ptcd1	88	44.874	ENSMICG00000017428	-	95	45.161	Microcebus_murinus
ENSMALG00000018442	ptcd1	99	68.913	ENSMMOG00000020243	ptcd1	98	71.763	Mola_mola
ENSMALG00000018442	ptcd1	80	47.049	ENSMODG00000001350	-	81	47.049	Monodelphis_domestica
ENSMALG00000018442	ptcd1	84	48.248	MGP_CAROLIEiJ_G0028011	Ptcd1	89	48.248	Mus_caroli
ENSMALG00000018442	ptcd1	84	48.408	ENSMUSG00000029624	Ptcd1	89	48.408	Mus_musculus
ENSMALG00000018442	ptcd1	84	48.567	MGP_PahariEiJ_G0024580	Ptcd1	89	48.567	Mus_pahari
ENSMALG00000018442	ptcd1	84	47.709	MGP_SPRETEiJ_G0029012	Ptcd1	89	48.718	Mus_spretus
ENSMALG00000018442	ptcd1	86	49.684	ENSMPUG00000016518	-	89	49.684	Mustela_putorius_furo
ENSMALG00000018442	ptcd1	80	50.847	ENSMLUG00000010994	-	90	47.605	Myotis_lucifugus
ENSMALG00000018442	ptcd1	96	70.057	ENSNBRG00000010079	ptcd1	98	70.657	Neolamprologus_brichardi
ENSMALG00000018442	ptcd1	70	48.948	ENSNLEG00000011060	-	87	48.948	Nomascus_leucogenys
ENSMALG00000018442	ptcd1	83	46.463	ENSMEUG00000006930	-	87	46.463	Notamacropus_eugenii
ENSMALG00000018442	ptcd1	72	56.818	ENSOPRG00000013647	-	76	56.818	Ochotona_princeps
ENSMALG00000018442	ptcd1	84	72.277	ENSONIG00000003168	ptcd1	99	72.277	Oreochromis_niloticus
ENSMALG00000018442	ptcd1	77	48.077	ENSOANG00000007728	-	74	48.077	Ornithorhynchus_anatinus
ENSMALG00000018442	ptcd1	79	50.340	ENSOCUG00000010584	-	89	48.690	Oryctolagus_cuniculus
ENSMALG00000018442	ptcd1	87	67.675	ENSORLG00000009275	ptcd1	91	67.675	Oryzias_latipes
ENSMALG00000018442	ptcd1	87	68.153	ENSORLG00020000988	ptcd1	91	68.153	Oryzias_latipes_hni
ENSMALG00000018442	ptcd1	87	67.409	ENSORLG00015010557	ptcd1	91	67.409	Oryzias_latipes_hsok
ENSMALG00000018442	ptcd1	95	63.450	ENSOMEG00000020627	ptcd1	99	63.450	Oryzias_melastigma
ENSMALG00000018442	ptcd1	80	48.067	ENSOGAG00000010877	-	86	47.697	Otolemur_garnettii
ENSMALG00000018442	ptcd1	88	43.421	ENSOARG00000018676	-	94	43.421	Ovis_aries
ENSMALG00000018442	ptcd1	80	49.244	ENSPPAG00000036024	-	84	49.249	Pan_paniscus
ENSMALG00000018442	ptcd1	85	49.603	ENSPPRG00000003478	-	89	49.603	Panthera_pardus
ENSMALG00000018442	ptcd1	80	49.915	ENSPTRG00000019452	-	84	49.916	Pan_troglodytes
ENSMALG00000018442	ptcd1	80	50.085	ENSPANG00000016730	-	83	50.253	Papio_anubis
ENSMALG00000018442	ptcd1	83	52.288	ENSPKIG00000014215	ptcd1	90	52.941	Paramormyrops_kingsleyae
ENSMALG00000018442	ptcd1	79	47.966	ENSPSIG00000011184	-	98	48.305	Pelodiscus_sinensis
ENSMALG00000018442	ptcd1	70	42.389	ENSPMAG00000009667	ptcd1	99	42.389	Petromyzon_marinus
ENSMALG00000018442	ptcd1	80	46.992	ENSPCIG00000024778	-	82	47.039	Phascolarctos_cinereus
ENSMALG00000018442	ptcd1	99	62.117	ENSPFOG00000004458	ptcd1	99	61.773	Poecilia_formosa
ENSMALG00000018442	ptcd1	99	61.925	ENSPLAG00000011051	ptcd1	99	61.944	Poecilia_latipinna
ENSMALG00000018442	ptcd1	98	62.989	ENSPMEG00000020547	ptcd1	99	62.742	Poecilia_mexicana
ENSMALG00000018442	ptcd1	98	61.592	ENSPREG00000000059	ptcd1	99	61.958	Poecilia_reticulata
ENSMALG00000018442	ptcd1	81	48.752	ENSPPYG00000017377	-	90	48.752	Pongo_abelii
ENSMALG00000018442	ptcd1	72	55.639	ENSPCAG00000001852	-	82	55.639	Procavia_capensis
ENSMALG00000018442	ptcd1	88	46.418	ENSPCOG00000018596	-	94	47.015	Propithecus_coquereli
ENSMALG00000018442	ptcd1	53	56.890	ENSPVAG00000007529	-	59	56.890	Pteropus_vampyrus
ENSMALG00000018442	ptcd1	99	70.874	ENSPNYG00000019993	ptcd1	99	70.874	Pundamilia_nyererei
ENSMALG00000018442	ptcd1	81	53.344	ENSPNAG00000014931	ptcd1	89	52.960	Pygocentrus_nattereri
ENSMALG00000018442	ptcd1	85	47.702	ENSRNOG00000000987	Ptcd1	91	47.702	Rattus_norvegicus
ENSMALG00000018442	ptcd1	81	49.082	ENSRBIG00000043393	-	85	49.082	Rhinopithecus_bieti
ENSMALG00000018442	ptcd1	81	48.748	ENSRROG00000036420	-	85	48.748	Rhinopithecus_roxellana
ENSMALG00000018442	ptcd1	80	49.492	ENSSBOG00000024114	-	84	49.663	Saimiri_boliviensis_boliviensis
ENSMALG00000018442	ptcd1	81	46.819	ENSSHAG00000011376	-	90	46.458	Sarcophilus_harrisii
ENSMALG00000018442	ptcd1	83	53.045	ENSSFOG00015007909	ptcd1	83	53.301	Scleropages_formosus
ENSMALG00000018442	ptcd1	87	70.774	ENSSMAG00000000218	ptcd1	99	70.570	Scophthalmus_maximus
ENSMALG00000018442	ptcd1	96	76.040	ENSSDUG00000015671	ptcd1	100	76.040	Seriola_dumerili
ENSMALG00000018442	ptcd1	92	77.198	ENSSLDG00000014261	ptcd1	99	75.000	Seriola_lalandi_dorsalis
ENSMALG00000018442	ptcd1	80	47.769	ENSSPUG00000003540	-	81	48.259	Sphenodon_punctatus
ENSMALG00000018442	ptcd1	99	70.492	ENSSPAG00000011049	ptcd1	100	70.315	Stegastes_partitus
ENSMALG00000018442	ptcd1	81	49.425	ENSSSCG00000007622	-	89	49.425	Sus_scrofa
ENSMALG00000018442	ptcd1	80	47.885	ENSTGUG00000007563	-	96	48.061	Taeniopygia_guttata
ENSMALG00000018442	ptcd1	96	64.521	ENSTRUG00000013471	ptcd1	99	63.712	Takifugu_rubripes
ENSMALG00000018442	ptcd1	95	62.409	ENSTNIG00000008271	ptcd1	99	62.409	Tetraodon_nigroviridis
ENSMALG00000018442	ptcd1	81	48.773	ENSTBEG00000011021	-	85	48.773	Tupaia_belangeri
ENSMALG00000018442	ptcd1	83	49.013	ENSTTRG00000003006	-	87	49.013	Tursiops_truncatus
ENSMALG00000018442	ptcd1	82	49.507	ENSUAMG00000008049	-	85	49.507	Ursus_americanus
ENSMALG00000018442	ptcd1	86	49.528	ENSVVUG00000008836	-	89	49.528	Vulpes_vulpes
ENSMALG00000018442	ptcd1	83	48.112	ENSXETG00000009891	ptcd1	88	48.112	Xenopus_tropicalis
ENSMALG00000018442	ptcd1	99	63.165	ENSXMAG00000015540	ptcd1	97	63.728	Xiphophorus_maculatus