EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000018499 (Gene tree)
Gene ID: 109970468
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 2878 bases
Position: chrKV884887.1:298912-301789
Accession: 109970468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000026657	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000027148	-	804	XM_020618034	ENSMALP00000026657	267 (aa)	XP_020473690	-

Gene Model

Click here to download ENSMALG00000018499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000018499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000018499	rab34b	58	31.013	ENSMALG00000014149	rhebl1	83	31.013
ENSMALG00000018499	rab34b	66	35.593	ENSMALG00000015854	rab6ba	83	35.593
ENSMALG00000018499	rab34b	57	37.086	ENSMALG00000014727	si:dkey-16l2.16	70	37.086
ENSMALG00000018499	rab34b	84	55.310	ENSMALG00000013806	rab36	93	54.667
ENSMALG00000018499	rab34b	89	67.932	ENSMALG00000016715	rab34a	89	67.932
ENSMALG00000018499	rab34b	62	37.126	ENSMALG00000018973	RAB39B	77	37.126
ENSMALG00000018499	rab34b	60	34.161	ENSMALG00000014929	rab5aa	73	34.161
ENSMALG00000018499	rab34b	60	33.540	ENSMALG00000022348	-	71	33.540
ENSMALG00000018499	rab34b	61	37.654	ENSMALG00000020364	-	76	37.654
ENSMALG00000018499	rab34b	63	36.527	ENSMALG00000003956	-	76	36.527
ENSMALG00000018499	rab34b	57	38.562	ENSMALG00000003712	zgc:101559	60	38.562
ENSMALG00000018499	rab34b	57	33.117	ENSMALG00000015936	RAB9A	70	33.117
ENSMALG00000018499	rab34b	52	36.429	ENSMALG00000002136	rab23	75	39.241
ENSMALG00000018499	rab34b	60	37.267	ENSMALG00000010438	rab30	77	37.267
ENSMALG00000018499	rab34b	65	33.143	ENSMALG00000013152	si:dkey-34d22.5	78	33.143
ENSMALG00000018499	rab34b	71	35.437	ENSMALG00000012723	RAB39B	96	35.437
ENSMALG00000018499	rab34b	70	30.481	ENSMALG00000005069	rab18b	89	30.481
ENSMALG00000018499	rab34b	60	35.404	ENSMALG00000015762	rab12	65	35.404
ENSMALG00000018499	rab34b	69	37.500	ENSMALG00000021129	zgc:171927	83	37.500
ENSMALG00000018499	rab34b	57	33.766	ENSMALG00000004053	RAB7A	73	33.766
ENSMALG00000018499	rab34b	61	37.423	ENSMALG00000006985	-	79	37.423
ENSMALG00000018499	rab34b	57	33.766	ENSMALG00000016312	RAB7A	73	33.766
ENSMALG00000018499	rab34b	61	37.576	ENSMALG00000021944	-	86	40.625
ENSMALG00000018499	rab34b	57	35.484	ENSMALG00000007664	rab9b	70	35.484
ENSMALG00000018499	rab34b	51	36.429	ENSMALG00000018436	RAB29	60	36.429
ENSMALG00000018499	rab34b	60	39.130	ENSMALG00000020807	-	79	39.130
ENSMALG00000018499	rab34b	62	35.542	ENSMALG00000004342	rab2a	76	35.542
ENSMALG00000018499	rab34b	61	36.420	ENSMALG00000017417	rab6bb	76	36.420
ENSMALG00000018499	rab34b	63	35.119	ENSMALG00000016038	RAB15	77	35.119
ENSMALG00000018499	rab34b	57	31.169	ENSMALG00000012506	rab9a	73	31.169
ENSMALG00000018499	rab34b	63	36.905	ENSMALG00000021928	rab15	77	36.905
ENSMALG00000018499	rab34b	61	39.264	ENSMALG00000010549	rab41	75	39.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000018499	rab34b	83	84.685	ENSAPOG00000019147	rab34b	96	77.114	Acanthochromis_polyacanthus
ENSMALG00000018499	rab34b	92	75.510	ENSACIG00000004859	rab34b	93	76.891	Amphilophus_citrinellus
ENSMALG00000018499	rab34b	91	85.656	ENSAOCG00000007106	rab34b	89	85.656	Amphiprion_ocellaris
ENSMALG00000018499	rab34b	87	83.550	ENSAPEG00000018607	rab34b	85	82.203	Amphiprion_percula
ENSMALG00000018499	rab34b	84	87.556	ENSATEG00000006851	rab34b	91	87.556	Anabas_testudineus
ENSMALG00000018499	rab34b	89	87.342	ENSACLG00000005733	rab34b	89	87.342	Astatotilapia_calliptera
ENSMALG00000018499	rab34b	89	70.886	ENSAMXG00000006018	rab34b	92	70.886	Astyanax_mexicanus
ENSMALG00000018499	rab34b	91	75.794	ENSCSEG00000018133	rab34b	100	75.794	Cynoglossus_semilaevis
ENSMALG00000018499	rab34b	93	73.684	ENSDARG00000010977	rab34b	94	73.684	Danio_rerio
ENSMALG00000018499	rab34b	89	82.278	ENSELUG00000005597	rab34b	91	82.278	Esox_lucius
ENSMALG00000018499	rab34b	88	84.746	ENSFHEG00000004532	rab34b	93	84.746	Fundulus_heteroclitus
ENSMALG00000018499	rab34b	71	80.952	ENSGMOG00000007140	rab34b	91	80.952	Gadus_morhua
ENSMALG00000018499	rab34b	89	86.975	ENSGACG00000020514	rab34b	92	86.975	Gasterosteus_aculeatus
ENSMALG00000018499	rab34b	94	67.729	ENSIPUG00000024531	rab34	95	67.729	Ictalurus_punctatus
ENSMALG00000018499	rab34b	88	86.017	ENSKMAG00000019341	rab34b	92	86.017	Kryptolebias_marmoratus
ENSMALG00000018499	rab34b	89	86.975	ENSLBEG00000027819	rab34b	94	87.234	Labrus_bergylta
ENSMALG00000018499	rab34b	87	87.500	ENSMAMG00000020214	rab34b	92	87.500	Mastacembelus_armatus
ENSMALG00000018499	rab34b	91	86.008	ENSMMOG00000010936	rab34b	85	86.008	Mola_mola
ENSMALG00000018499	rab34b	93	84.615	ENSONIG00000005519	rab34b	93	87.712	Oreochromis_niloticus
ENSMALG00000018499	rab34b	89	82.700	ENSORLG00000003119	rab34b	86	82.700	Oryzias_latipes
ENSMALG00000018499	rab34b	89	82.700	ENSORLG00020016139	rab34b	86	82.700	Oryzias_latipes_hni
ENSMALG00000018499	rab34b	89	83.122	ENSORLG00015000584	rab34b	86	83.122	Oryzias_latipes_hsok
ENSMALG00000018499	rab34b	89	82.773	ENSOMEG00000010334	rab34b	91	81.333	Oryzias_melastigma
ENSMALG00000018499	rab34b	89	70.464	ENSPKIG00000013326	rab34b	91	70.464	Paramormyrops_kingsleyae
ENSMALG00000018499	rab34b	89	83.122	ENSPMGG00000021697	rab34b	92	83.122	Periophthalmus_magnuspinnatus
ENSMALG00000018499	rab34b	89	85.654	ENSPFOG00000011444	rab34b	93	85.654	Poecilia_formosa
ENSMALG00000018499	rab34b	88	85.593	ENSPLAG00000005074	rab34b	93	85.593	Poecilia_latipinna
ENSMALG00000018499	rab34b	88	85.593	ENSPMEG00000013297	rab34b	93	85.593	Poecilia_mexicana
ENSMALG00000018499	rab34b	88	85.169	ENSPREG00000009813	rab34b	93	85.169	Poecilia_reticulata
ENSMALG00000018499	rab34b	89	78.571	ENSPNYG00000017153	rab34b	100	87.151	Pundamilia_nyererei
ENSMALG00000018499	rab34b	82	72.477	ENSPNAG00000015040	rab34b	91	72.477	Pygocentrus_nattereri
ENSMALG00000018499	rab34b	89	72.574	ENSSFOG00015005188	rab34	91	72.574	Scleropages_formosus
ENSMALG00000018499	rab34b	90	84.583	ENSSMAG00000019926	rab34b	96	84.583	Scophthalmus_maximus
ENSMALG00000018499	rab34b	89	89.030	ENSSDUG00000016760	rab34b	74	89.030	Seriola_dumerili
ENSMALG00000018499	rab34b	70	88.172	ENSSLDG00000014812	rab34b	91	88.172	Seriola_lalandi_dorsalis
ENSMALG00000018499	rab34b	88	87.288	ENSSPAG00000002801	rab34b	93	87.288	Stegastes_partitus
ENSMALG00000018499	rab34b	90	82.083	ENSTRUG00000014481	rab34b	97	82.083	Takifugu_rubripes
ENSMALG00000018499	rab34b	89	82.353	ENSTNIG00000016158	rab34b	92	82.353	Tetraodon_nigroviridis