EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000019408 (Gene tree)
Gene ID: 109958939
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 4169 bases
Position: chrKV884723.1:1668948-1673116
Accession: 109958939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000027981	RRM_1	PF00076.22	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000028495	ALYREF-201	2350	XM_020597927	ENSMALP00000027981	269 (aa)	XP_020453583	UPI0009B4A567

Gene Model

Click here to download ENSMALG00000019408's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03013	RNA transport	KEGG
malb03015	mRNA surveillance pathway	KEGG
malb03040	Spliceosome	KEGG
malb05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000019408's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000019408	ALYREF	100	53.214	ENSMALG00000006054	-	100	46.844

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000019408	ALYREF	100	72.000	ENSG00000183684	ALYREF	97	69.091	Homo_sapiens
ENSMALG00000019408	ALYREF	100	79.044	ENSAPOG00000018455	ALYREF	100	85.294	Acanthochromis_polyacanthus
ENSMALG00000019408	ALYREF	75	74.627	ENSAMEG00000017463	ALYREF	74	75.758	Ailuropoda_melanoleuca
ENSMALG00000019408	ALYREF	100	66.052	ENSACAG00000010526	ALYREF	100	65.314	Anolis_carolinensis
ENSMALG00000019408	ALYREF	75	77.114	ENSANAG00000022638	-	81	72.549	Aotus_nancymaae
ENSMALG00000019408	ALYREF	100	63.636	ENSANAG00000028229	-	78	61.957	Aotus_nancymaae
ENSMALG00000019408	ALYREF	100	71.636	ENSBTAG00000008498	ALYREF	100	69.928	Bos_taurus
ENSMALG00000019408	ALYREF	100	69.818	ENSCJAG00000039942	ALYREF	97	68.727	Callithrix_jacchus
ENSMALG00000019408	ALYREF	100	72.000	ENSCAFG00000005877	ALYREF	100	70.290	Canis_familiaris
ENSMALG00000019408	ALYREF	100	72.000	ENSCAFG00020009815	ALYREF	100	70.290	Canis_lupus_dingo
ENSMALG00000019408	ALYREF	100	71.014	ENSCHIG00000017396	ALYREF	97	69.314	Capra_hircus
ENSMALG00000019408	ALYREF	80	71.628	ENSTSYG00000002272	ALYREF	75	73.367	Carlito_syrichta
ENSMALG00000019408	ALYREF	51	76.087	ENSCAPG00000014727	-	100	79.856	Cavia_aperea
ENSMALG00000019408	ALYREF	100	69.818	ENSCPOG00000013710	ALYREF	100	69.203	Cavia_porcellus
ENSMALG00000019408	ALYREF	100	61.852	ENSCCAG00000030237	-	100	60.886	Cebus_capucinus
ENSMALG00000019408	ALYREF	100	73.091	ENSCCAG00000020578	-	97	69.455	Cebus_capucinus
ENSMALG00000019408	ALYREF	100	72.364	ENSCATG00000033169	ALYREF	97	69.455	Cercocebus_atys
ENSMALG00000019408	ALYREF	100	68.015	ENSCLAG00000015026	ALYREF	100	67.407	Chinchilla_lanigera
ENSMALG00000019408	ALYREF	100	72.364	ENSCSAG00000002216	ALYREF	97	69.455	Chlorocebus_sabaeus
ENSMALG00000019408	ALYREF	74	76.355	ENSCANG00000034056	ALYREF	96	71.921	Colobus_angolensis_palliatus
ENSMALG00000019408	ALYREF	100	66.423	ENSCGRG00001018191	-	100	69.455	Cricetulus_griseus_chok1gshd
ENSMALG00000019408	ALYREF	74	74.000	ENSCGRG00000015871	-	100	67.727	Cricetulus_griseus_crigri
ENSMALG00000019408	ALYREF	72	58.163	ENSCSEG00000015438	-	98	54.592	Cynoglossus_semilaevis
ENSMALG00000019408	ALYREF	71	78.010	ENSDNOG00000002563	ALYREF	75	76.562	Dasypus_novemcinctus
ENSMALG00000019408	ALYREF	71	78.646	ENSDORG00000025849	-	73	76.166	Dipodomys_ordii
ENSMALG00000019408	ALYREF	71	79.058	ENSETEG00000016596	ALYREF	100	77.083	Echinops_telfairi
ENSMALG00000019408	ALYREF	100	71.273	ENSEASG00005005824	ALYREF	95	69.565	Equus_asinus_asinus
ENSMALG00000019408	ALYREF	100	71.273	ENSECAG00000018754	ALYREF	95	69.565	Equus_caballus
ENSMALG00000019408	ALYREF	67	71.505	ENSEEUG00000010164	ALYREF	100	68.280	Erinaceus_europaeus
ENSMALG00000019408	ALYREF	100	71.636	ENSFCAG00000022549	ALYREF	98	69.928	Felis_catus
ENSMALG00000019408	ALYREF	80	72.018	ENSFDAG00000001213	ALYREF	90	72.170	Fukomys_damarensis
ENSMALG00000019408	ALYREF	100	70.111	ENSGALG00000007237	ALYREF	100	68.635	Gallus_gallus
ENSMALG00000019408	ALYREF	100	80.443	ENSGACG00000013328	ALYREF	100	79.705	Gasterosteus_aculeatus
ENSMALG00000019408	ALYREF	100	70.849	ENSGAGG00000008536	ALYREF	100	69.004	Gopherus_agassizii
ENSMALG00000019408	ALYREF	100	72.364	ENSGGOG00000013935	ALYREF	99	68.841	Gorilla_gorilla
ENSMALG00000019408	ALYREF	100	71.898	ENSHGLG00000008293	ALYREF	100	70.182	Heterocephalus_glaber_female
ENSMALG00000019408	ALYREF	72	77.320	ENSHGLG00100006949	ALYREF	77	75.385	Heterocephalus_glaber_male
ENSMALG00000019408	ALYREF	100	77.407	ENSHCOG00000015046	ALYREF	100	78.519	Hippocampus_comes
ENSMALG00000019408	ALYREF	100	70.909	ENSJJAG00000004134	-	100	69.203	Jaculus_jaculus
ENSMALG00000019408	ALYREF	100	69.888	ENSLACG00000005694	ALYREF	100	69.145	Latimeria_chalumnae
ENSMALG00000019408	ALYREF	74	79.000	ENSLAFG00000003083	ALYREF	100	76.733	Loxodonta_africana
ENSMALG00000019408	ALYREF	100	72.119	ENSMFAG00000001394	ALYREF	97	69.145	Macaca_fascicularis
ENSMALG00000019408	ALYREF	100	72.364	ENSMMUG00000012884	ALYREF	97	69.455	Macaca_mulatta
ENSMALG00000019408	ALYREF	100	72.364	ENSMNEG00000043666	ALYREF	97	69.455	Macaca_nemestrina
ENSMALG00000019408	ALYREF	74	74.384	ENSMLEG00000043353	ALYREF	87	72.414	Mandrillus_leucophaeus
ENSMALG00000019408	ALYREF	100	65.818	ENSMAUG00000020552	-	100	64.074	Mesocricetus_auratus
ENSMALG00000019408	ALYREF	100	69.455	ENSMICG00000017403	ALYREF	97	69.203	Microcebus_murinus
ENSMALG00000019408	ALYREF	100	68.401	ENSMOCG00000016792	-	100	67.647	Microtus_ochrogaster
ENSMALG00000019408	ALYREF	99	69.708	ENSMODG00000003030	ALYREF	84	69.091	Monodelphis_domestica
ENSMALG00000019408	ALYREF	100	60.741	MGP_CAROLIEiJ_G0014874	Alyref2	100	61.993	Mus_caroli
ENSMALG00000019408	ALYREF	100	70.438	MGP_CAROLIEiJ_G0017529	Alyref	100	70.182	Mus_caroli
ENSMALG00000019408	ALYREF	90	56.504	ENSMUSG00000096744	Gm4307	64	57.078	Mus_musculus
ENSMALG00000019408	ALYREF	90	56.098	ENSMUSG00000096640	Gm4312	64	55.708	Mus_musculus
ENSMALG00000019408	ALYREF	90	56.504	ENSMUSG00000091101	Gm4302	63	57.078	Mus_musculus
ENSMALG00000019408	ALYREF	100	52.174	ENSMUSG00000094144	Gm21312	100	49.153	Mus_musculus
ENSMALG00000019408	ALYREF	100	61.111	ENSMUSG00000060244	Alyref2	100	60.886	Mus_musculus
ENSMALG00000019408	ALYREF	100	52.174	ENSMUSG00000097878	Gm8764	98	52.571	Mus_musculus
ENSMALG00000019408	ALYREF	100	52.174	ENSMUSG00000097427	Gm6763	98	52.571	Mus_musculus
ENSMALG00000019408	ALYREF	100	51.636	ENSMUSG00000117091	AC153137.1	100	51.273	Mus_musculus
ENSMALG00000019408	ALYREF	100	70.438	ENSMUSG00000025134	Alyref	100	70.182	Mus_musculus
ENSMALG00000019408	ALYREF	100	52.364	ENSMUSG00000086727	4931428L18Rik	100	50.909	Mus_musculus
ENSMALG00000019408	ALYREF	100	52.174	ENSMUSG00000095022	Gm20765	100	49.153	Mus_musculus
ENSMALG00000019408	ALYREF	100	52.174	ENSMUSG00000097550	Gm21304	100	49.153	Mus_musculus
ENSMALG00000019408	ALYREF	90	56.504	ENSMUSG00000112931	Gm4303	64	57.078	Mus_musculus
ENSMALG00000019408	ALYREF	100	52.174	ENSMUSG00000091779	Gm21293	100	49.153	Mus_musculus
ENSMALG00000019408	ALYREF	90	56.098	ENSMUSG00000094314	Gm4301	64	55.708	Mus_musculus
ENSMALG00000019408	ALYREF	100	51.485	ENSMUSG00000090854	Gm4340	100	48.495	Mus_musculus
ENSMALG00000019408	ALYREF	90	56.504	ENSMUSG00000112856	Gm4305	64	57.078	Mus_musculus
ENSMALG00000019408	ALYREF	81	58.257	MGP_PahariEiJ_G0027255	-	84	56.502	Mus_pahari
ENSMALG00000019408	ALYREF	81	58.257	MGP_PahariEiJ_G0027254	-	86	56.502	Mus_pahari
ENSMALG00000019408	ALYREF	100	70.438	MGP_PahariEiJ_G0018655	-	100	70.182	Mus_pahari
ENSMALG00000019408	ALYREF	73	74.257	MGP_PahariEiJ_G0018656	-	99	71.287	Mus_pahari
ENSMALG00000019408	ALYREF	100	70.438	MGP_SPRETEiJ_G0018373	Alyref	100	70.182	Mus_spretus
ENSMALG00000019408	ALYREF	100	60.741	MGP_SPRETEiJ_G0015679	Alyref2	100	60.148	Mus_spretus
ENSMALG00000019408	ALYREF	71	51.452	MGP_SPRETEiJ_G0016590	-	100	49.367	Mus_spretus
ENSMALG00000019408	ALYREF	98	49.259	ENSMLUG00000024471	-	70	54.976	Myotis_lucifugus
ENSMALG00000019408	ALYREF	98	53.962	ENSMLUG00000030407	-	77	51.515	Myotis_lucifugus
ENSMALG00000019408	ALYREF	74	74.500	ENSMLUG00000009555	-	68	74.257	Myotis_lucifugus
ENSMALG00000019408	ALYREF	98	49.627	ENSMLUG00000015043	-	84	55.502	Myotis_lucifugus
ENSMALG00000019408	ALYREF	74	50.481	ENSMLUG00000023213	-	74	49.505	Myotis_lucifugus
ENSMALG00000019408	ALYREF	76	61.353	ENSMLUG00000024976	-	66	59.512	Myotis_lucifugus
ENSMALG00000019408	ALYREF	79	53.521	ENSMLUG00000028343	-	91	53.202	Myotis_lucifugus
ENSMALG00000019408	ALYREF	98	57.955	ENSMLUG00000027516	-	78	57.576	Myotis_lucifugus
ENSMALG00000019408	ALYREF	76	63.235	ENSMLUG00000026271	-	66	60.000	Myotis_lucifugus
ENSMALG00000019408	ALYREF	98	54.545	ENSMLUG00000027352	-	77	52.273	Myotis_lucifugus
ENSMALG00000019408	ALYREF	98	54.717	ENSMLUG00000025677	-	77	51.894	Myotis_lucifugus
ENSMALG00000019408	ALYREF	74	61.809	ENSMLUG00000024447	-	65	58.252	Myotis_lucifugus
ENSMALG00000019408	ALYREF	98	50.758	ENSMLUG00000022869	-	69	57.005	Myotis_lucifugus
ENSMALG00000019408	ALYREF	98	57.895	ENSMLUG00000002626	-	98	54.545	Myotis_lucifugus
ENSMALG00000019408	ALYREF	100	72.364	ENSNLEG00000010313	ALYREF	97	69.455	Nomascus_leucogenys
ENSMALG00000019408	ALYREF	51	77.536	ENSMEUG00000002210	ALYREF	59	80.576	Notamacropus_eugenii
ENSMALG00000019408	ALYREF	51	75.362	ENSOPRG00000005551	-	52	79.137	Ochotona_princeps
ENSMALG00000019408	ALYREF	100	69.784	ENSODEG00000008359	ALYREF	100	69.176	Octodon_degus
ENSMALG00000019408	ALYREF	100	83.026	ENSORLG00000012331	ALYREF	100	84.502	Oryzias_latipes
ENSMALG00000019408	ALYREF	71	79.275	ENSOGAG00000012409	ALYREF	76	76.804	Otolemur_garnettii
ENSMALG00000019408	ALYREF	71	79.581	ENSOARG00000017932	ALYREF	69	75.369	Ovis_aries
ENSMALG00000019408	ALYREF	100	71.636	ENSPPRG00000010829	ALYREF	98	69.928	Panthera_pardus
ENSMALG00000019408	ALYREF	51	84.559	ENSPTIG00000006399	ALYREF	74	81.119	Panthera_tigris_altaica
ENSMALG00000019408	ALYREF	100	72.364	ENSPTRG00000009774	ALYREF	97	69.455	Pan_troglodytes
ENSMALG00000019408	ALYREF	100	72.364	ENSPANG00000019265	ALYREF	97	69.455	Papio_anubis
ENSMALG00000019408	ALYREF	51	76.471	ENSPSIG00000017541	ALYREF	98	79.412	Pelodiscus_sinensis
ENSMALG00000019408	ALYREF	100	72.364	ENSPPYG00000008749	ALYREF	97	69.455	Pongo_abelii
ENSMALG00000019408	ALYREF	100	69.455	ENSPCOG00000020874	ALYREF	97	69.203	Propithecus_coquereli
ENSMALG00000019408	ALYREF	100	66.914	ENSPVAG00000017866	ALYREF	100	65.556	Pteropus_vampyrus
ENSMALG00000019408	ALYREF	67	71.658	ENSRNOG00000036687	Alyref	91	68.817	Rattus_norvegicus
ENSMALG00000019408	ALYREF	72	77.835	ENSRBIG00000039651	ALYREF	74	74.227	Rhinopithecus_bieti
ENSMALG00000019408	ALYREF	80	74.208	ENSRROG00000045364	ALYREF	80	72.018	Rhinopithecus_roxellana
ENSMALG00000019408	ALYREF	74	75.758	ENSSHAG00000010459	ALYREF	95	75.758	Sarcophilus_harrisii
ENSMALG00000019408	ALYREF	100	53.546	ENSSDUG00000003992	-	100	54.064	Seriola_dumerili
ENSMALG00000019408	ALYREF	100	53.763	ENSSLDG00000005386	-	100	54.064	Seriola_lalandi_dorsalis
ENSMALG00000019408	ALYREF	100	69.373	ENSSPUG00000004600	ALYREF	100	68.266	Sphenodon_punctatus
ENSMALG00000019408	ALYREF	100	84.249	ENSSPAG00000011178	ALYREF	97	85.348	Stegastes_partitus
ENSMALG00000019408	ALYREF	100	72.263	ENSSSCG00000032655	ALYREF	100	70.182	Sus_scrofa
ENSMALG00000019408	ALYREF	51	77.941	ENSTGUG00000003513	ALYREF	100	76.596	Taeniopygia_guttata
ENSMALG00000019408	ALYREF	100	80.669	ENSTRUG00000008828	ALYREF	100	79.554	Takifugu_rubripes
ENSMALG00000019408	ALYREF	71	78.010	ENSTBEG00000005834	ALYREF	100	77.083	Tupaia_belangeri
ENSMALG00000019408	ALYREF	100	66.182	ENSTTRG00000012275	ALYREF	100	68.478	Tursiops_truncatus
ENSMALG00000019408	ALYREF	71	66.842	ENSUAMG00000016931	ALYREF	66	67.016	Ursus_americanus
ENSMALG00000019408	ALYREF	71	66.316	ENSUMAG00000016384	ALYREF	65	66.492	Ursus_maritimus
ENSMALG00000019408	ALYREF	100	67.399	ENSXETG00000005391	alyref	100	64.835	Xenopus_tropicalis