EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000019426 (Gene tree)
Gene ID: 109973316
Gene Symbol: parn
Alias: zgc:56067
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 11456 bases
Position: chrKV884976.1:906175-917630
Accession: 109973316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000028064	RNA_bind	PF08675.11	1.2e-33	1	1
ENSMALP00000028076	RNA_bind	PF08675.11	1.6e-33	1	1
ENSMALP00000028064	CAF1	PF04857.20	1.6e-87	1	1
ENSMALP00000028076	CAF1	PF04857.20	1.8e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000028591	-	3546	XM_020622809	ENSMALP00000028076	676 (aa)	XP_020478465	-
ENSMALT00000028579	-	1773	-	ENSMALP00000028064	590 (aa)	-	-

Gene Model

Click here to download ENSMALG00000019426's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000019426's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000019426	parn	91	79.330	ENSG00000140694	PARN	99	71.429	Homo_sapiens
ENSMALG00000019426	parn	91	78.253	ENSAMEG00000011208	PARN	83	78.253	Ailuropoda_melanoleuca
ENSMALG00000019426	parn	97	88.266	ENSACIG00000000619	parn	95	82.787	Amphilophus_citrinellus
ENSMALG00000019426	parn	94	93.682	ENSAOCG00000003465	parn	96	88.654	Amphiprion_ocellaris
ENSMALG00000019426	parn	89	90.909	ENSAPEG00000010661	parn	100	90.909	Amphiprion_percula
ENSMALG00000019426	parn	94	93.682	ENSATEG00000004661	parn	96	90.563	Anabas_testudineus
ENSMALG00000019426	parn	93	74.910	ENSAPLG00000013914	PARN	86	75.451	Anas_platyrhynchos
ENSMALG00000019426	parn	91	78.439	ENSACAG00000004973	PARN	82	78.439	Anolis_carolinensis
ENSMALG00000019426	parn	91	78.957	ENSANAG00000031516	PARN	91	76.667	Aotus_nancymaae
ENSMALG00000019426	parn	94	93.863	ENSACLG00000004742	parn	96	88.889	Astatotilapia_calliptera
ENSMALG00000019426	parn	92	83.210	ENSAMXG00000012390	parn	87	81.273	Astyanax_mexicanus
ENSMALG00000019426	parn	93	74.229	ENSBTAG00000018097	PARN	89	73.704	Bos_taurus
ENSMALG00000019426	parn	91	79.143	ENSCJAG00000015866	PARN	91	76.667	Callithrix_jacchus
ENSMALG00000019426	parn	91	78.026	ENSCAFG00000018795	PARN	83	78.026	Canis_familiaris
ENSMALG00000019426	parn	91	78.399	ENSCAFG00020024126	PARN	83	78.399	Canis_lupus_dingo
ENSMALG00000019426	parn	93	77.132	ENSCHIG00000018143	PARN	85	77.132	Capra_hircus
ENSMALG00000019426	parn	79	51.351	ENSCAPG00000007984	PARN	78	51.351	Cavia_aperea
ENSMALG00000019426	parn	91	77.654	ENSCPOG00000002263	PARN	83	77.654	Cavia_porcellus
ENSMALG00000019426	parn	91	79.143	ENSCCAG00000030367	PARN	91	76.667	Cebus_capucinus
ENSMALG00000019426	parn	57	32.847	ENSCATG00000033196	PNLDC1	70	32.847	Cercocebus_atys
ENSMALG00000019426	parn	91	78.957	ENSCATG00000041368	PARN	95	78.957	Cercocebus_atys
ENSMALG00000019426	parn	91	78.585	ENSCLAG00000015406	PARN	83	78.585	Chinchilla_lanigera
ENSMALG00000019426	parn	91	79.143	ENSCSAG00000008142	PARN	83	79.143	Chlorocebus_sabaeus
ENSMALG00000019426	parn	89	61.059	ENSCHOG00000007014	PARN	86	57.477	Choloepus_hoffmanni
ENSMALG00000019426	parn	84	76.389	ENSCPBG00000006609	PARN	89	74.904	Chrysemys_picta_bellii
ENSMALG00000019426	parn	86	41.243	ENSCING00000010142	-	99	41.243	Ciona_intestinalis
ENSMALG00000019426	parn	91	67.091	ENSCANG00000028849	-	80	86.207	Colobus_angolensis_palliatus
ENSMALG00000019426	parn	91	77.281	ENSCGRG00001012096	Parn	84	77.281	Cricetulus_griseus_chok1gshd
ENSMALG00000019426	parn	91	77.281	ENSCGRG00000004939	Parn	84	77.281	Cricetulus_griseus_crigri
ENSMALG00000019426	parn	94	88.288	ENSCSEG00000002064	parn	100	80.090	Cynoglossus_semilaevis
ENSMALG00000019426	parn	94	88.448	ENSCVAG00000014848	parn	96	84.627	Cyprinodon_variegatus
ENSMALG00000019426	parn	94	75.000	ENSDARG00000102634	parn	100	62.963	Danio_rerio
ENSMALG00000019426	parn	91	78.585	ENSDNOG00000000833	PARN	94	78.585	Dasypus_novemcinctus
ENSMALG00000019426	parn	71	74.717	ENSETEG00000014828	-	69	74.717	Echinops_telfairi
ENSMALG00000019426	parn	91	78.212	ENSEASG00005011400	PARN	83	78.212	Equus_asinus_asinus
ENSMALG00000019426	parn	91	78.026	ENSECAG00000017792	PARN	83	78.026	Equus_caballus
ENSMALG00000019426	parn	80	65.022	ENSEEUG00000010370	PARN	74	65.022	Erinaceus_europaeus
ENSMALG00000019426	parn	94	84.058	ENSELUG00000013139	parn	86	75.643	Esox_lucius
ENSMALG00000019426	parn	91	78.771	ENSFCAG00000044961	PARN	83	78.771	Felis_catus
ENSMALG00000019426	parn	93	75.226	ENSFALG00000003911	PARN	85	75.769	Ficedula_albicollis
ENSMALG00000019426	parn	91	78.212	ENSFDAG00000009234	PARN	85	76.536	Fukomys_damarensis
ENSMALG00000019426	parn	94	81.227	ENSFHEG00000013738	parn	92	85.000	Fundulus_heteroclitus
ENSMALG00000019426	parn	94	84.601	ENSGMOG00000003231	parn	99	84.601	Gadus_morhua
ENSMALG00000019426	parn	91	77.467	ENSGALG00000003091	PARN	84	77.467	Gallus_gallus
ENSMALG00000019426	parn	94	87.770	ENSGAFG00000011061	parn	96	82.701	Gambusia_affinis
ENSMALG00000019426	parn	100	81.120	ENSGACG00000019501	parn	100	81.120	Gasterosteus_aculeatus
ENSMALG00000019426	parn	91	79.330	ENSGGOG00000025224	PARN	83	86.207	Gorilla_gorilla
ENSMALG00000019426	parn	94	94.043	ENSHBUG00000017906	parn	100	87.542	Haplochromis_burtoni
ENSMALG00000019426	parn	91	78.026	ENSHGLG00000010886	PARN	95	67.727	Heterocephalus_glaber_female
ENSMALG00000019426	parn	91	78.026	ENSHGLG00100014659	PARN	95	67.727	Heterocephalus_glaber_male
ENSMALG00000019426	parn	99	81.100	ENSHCOG00000008683	parn	99	81.100	Hippocampus_comes
ENSMALG00000019426	parn	92	70.795	ENSIPUG00000012401	parn	95	60.666	Ictalurus_punctatus
ENSMALG00000019426	parn	91	77.467	ENSSTOG00000007519	PARN	84	77.467	Ictidomys_tridecemlineatus
ENSMALG00000019426	parn	91	77.654	ENSJJAG00000023049	Parn	85	77.654	Jaculus_jaculus
ENSMALG00000019426	parn	94	90.217	ENSKMAG00000009462	parn	96	85.845	Kryptolebias_marmoratus
ENSMALG00000019426	parn	94	91.336	ENSLBEG00000009167	parn	95	88.689	Labrus_bergylta
ENSMALG00000019426	parn	85	75.595	ENSLACG00000004207	PARN	99	75.598	Latimeria_chalumnae
ENSMALG00000019426	parn	93	80.944	ENSLOCG00000000715	parn	96	68.889	Lepisosteus_oculatus
ENSMALG00000019426	parn	91	78.771	ENSLAFG00000015036	PARN	84	78.771	Loxodonta_africana
ENSMALG00000019426	parn	52	30.794	ENSLAFG00000030189	PNLDC1	76	31.250	Loxodonta_africana
ENSMALG00000019426	parn	91	75.233	ENSMFAG00000044852	PARN	80	86.207	Macaca_fascicularis
ENSMALG00000019426	parn	91	78.957	ENSMMUG00000018849	PARN	80	86.207	Macaca_mulatta
ENSMALG00000019426	parn	91	79.143	ENSMNEG00000045108	PARN	80	86.207	Macaca_nemestrina
ENSMALG00000019426	parn	91	79.143	ENSMLEG00000031743	PARN	80	86.207	Mandrillus_leucophaeus
ENSMALG00000019426	parn	97	92.237	ENSMAMG00000006939	parn	96	92.237	Mastacembelus_armatus
ENSMALG00000019426	parn	94	94.043	ENSMZEG00005013590	parn	100	87.458	Maylandia_zebra
ENSMALG00000019426	parn	89	75.758	ENSMGAG00000001004	PARN	87	72.679	Meleagris_gallopavo
ENSMALG00000019426	parn	91	71.062	ENSMAUG00000008025	Parn	84	71.062	Mesocricetus_auratus
ENSMALG00000019426	parn	91	78.771	ENSMICG00000016053	PARN	91	75.000	Microcebus_murinus
ENSMALG00000019426	parn	84	78.629	ENSMOCG00000022211	Parn	100	78.629	Microtus_ochrogaster
ENSMALG00000019426	parn	100	83.007	ENSMMOG00000011333	parn	100	83.007	Mola_mola
ENSMALG00000019426	parn	84	80.120	ENSMODG00000004915	PARN	99	80.120	Monodelphis_domestica
ENSMALG00000019426	parn	91	76.164	MGP_CAROLIEiJ_G0020466	Parn	84	76.164	Mus_caroli
ENSMALG00000019426	parn	91	75.978	ENSMUSG00000022685	Parn	100	75.904	Mus_musculus
ENSMALG00000019426	parn	91	75.978	MGP_PahariEiJ_G0016172	Parn	84	75.978	Mus_pahari
ENSMALG00000019426	parn	94	73.322	MGP_SPRETEiJ_G0021361	Parn	89	73.322	Mus_spretus
ENSMALG00000019426	parn	91	78.771	ENSMPUG00000014464	PARN	83	78.771	Mustela_putorius_furo
ENSMALG00000019426	parn	84	78.629	ENSMLUG00000005414	PARN	100	78.629	Myotis_lucifugus
ENSMALG00000019426	parn	100	87.542	ENSNBRG00000006805	parn	100	87.542	Neolamprologus_brichardi
ENSMALG00000019426	parn	91	79.143	ENSNLEG00000010241	PARN	91	76.667	Nomascus_leucogenys
ENSMALG00000019426	parn	83	65.833	ENSMEUG00000008178	-	77	65.833	Notamacropus_eugenii
ENSMALG00000019426	parn	89	73.346	ENSOPRG00000012187	PARN	83	73.346	Ochotona_princeps
ENSMALG00000019426	parn	91	71.667	ENSODEG00000001617	PARN	85	71.667	Octodon_degus
ENSMALG00000019426	parn	94	94.404	ENSONIG00000000151	parn	96	90.259	Oreochromis_niloticus
ENSMALG00000019426	parn	51	79.016	ENSOANG00000020155	-	84	74.695	Ornithorhynchus_anatinus
ENSMALG00000019426	parn	90	79.057	ENSOCUG00000000322	PARN	83	79.057	Oryctolagus_cuniculus
ENSMALG00000019426	parn	94	88.267	ENSORLG00020010313	parn	96	82.344	Oryzias_latipes_hni
ENSMALG00000019426	parn	94	87.545	ENSORLG00015000300	parn	96	81.735	Oryzias_latipes_hsok
ENSMALG00000019426	parn	94	86.823	ENSOMEG00000019555	parn	96	80.395	Oryzias_melastigma
ENSMALG00000019426	parn	84	79.074	ENSOGAG00000014626	PARN	100	79.074	Otolemur_garnettii
ENSMALG00000019426	parn	84	79.839	ENSOARG00000007574	PARN	100	79.839	Ovis_aries
ENSMALG00000019426	parn	91	79.143	ENSPPAG00000031438	PARN	91	76.667	Pan_paniscus
ENSMALG00000019426	parn	91	78.771	ENSPPRG00000018583	PARN	83	78.771	Panthera_pardus
ENSMALG00000019426	parn	91	78.771	ENSPTIG00000012135	PARN	83	78.771	Panthera_tigris_altaica
ENSMALG00000019426	parn	91	79.143	ENSPTRG00000007792	PARN	91	76.667	Pan_troglodytes
ENSMALG00000019426	parn	91	76.536	ENSPANG00000020099	PARN	80	86.207	Papio_anubis
ENSMALG00000019426	parn	94	79.891	ENSPKIG00000022807	parn	87	75.627	Paramormyrops_kingsleyae
ENSMALG00000019426	parn	95	75.795	ENSPSIG00000014804	PARN	89	73.988	Pelodiscus_sinensis
ENSMALG00000019426	parn	93	84.783	ENSPMGG00000014431	parn	76	85.145	Periophthalmus_magnuspinnatus
ENSMALG00000019426	parn	91	74.813	ENSPEMG00000018439	Parn	84	74.813	Peromyscus_maniculatus_bairdii
ENSMALG00000019426	parn	87	69.201	ENSPMAG00000003956	parn	97	69.201	Petromyzon_marinus
ENSMALG00000019426	parn	72	71.562	ENSPCIG00000001259	PARN	91	76.667	Phascolarctos_cinereus
ENSMALG00000019426	parn	94	88.628	ENSPFOG00000012823	parn	96	83.866	Poecilia_formosa
ENSMALG00000019426	parn	94	88.809	ENSPLAG00000006395	parn	96	84.018	Poecilia_latipinna
ENSMALG00000019426	parn	94	88.448	ENSPMEG00000007711	parn	96	84.018	Poecilia_mexicana
ENSMALG00000019426	parn	94	88.448	ENSPREG00000000147	parn	96	84.018	Poecilia_reticulata
ENSMALG00000019426	parn	91	78.664	ENSPPYG00000007123	PARN	83	78.664	Pongo_abelii
ENSMALG00000019426	parn	85	68.986	ENSPCAG00000001741	PARN	90	65.027	Procavia_capensis
ENSMALG00000019426	parn	91	75.791	ENSPCOG00000019292	PARN	91	75.000	Propithecus_coquereli
ENSMALG00000019426	parn	89	75.803	ENSPVAG00000002547	PARN	83	75.803	Pteropus_vampyrus
ENSMALG00000019426	parn	94	94.043	ENSPNYG00000006835	parn	96	89.650	Pundamilia_nyererei
ENSMALG00000019426	parn	85	82.800	ENSPNAG00000018905	parn	100	70.833	Pygocentrus_nattereri
ENSMALG00000019426	parn	93	75.000	ENSRNOG00000002912	Parn	96	78.571	Rattus_norvegicus
ENSMALG00000019426	parn	91	77.281	ENSSBOG00000034726	PARN	80	86.207	Saimiri_boliviensis_boliviensis
ENSMALG00000019426	parn	71	78.708	ENSSHAG00000008493	PARN	93	78.708	Sarcophilus_harrisii
ENSMALG00000019426	parn	95	78.863	ENSSFOG00015014165	parn	91	77.314	Scleropages_formosus
ENSMALG00000019426	parn	94	90.072	ENSSMAG00000000685	parn	96	86.716	Scophthalmus_maximus
ENSMALG00000019426	parn	99	90.103	ENSSDUG00000014555	parn	98	90.399	Seriola_dumerili
ENSMALG00000019426	parn	74	80.000	ENSSARG00000014339	PARN	75	80.000	Sorex_araneus
ENSMALG00000019426	parn	95	75.936	ENSSPUG00000007719	PARN	87	75.936	Sphenodon_punctatus
ENSMALG00000019426	parn	50	30.492	ENSSPUG00000004627	PNLDC1	89	30.492	Sphenodon_punctatus
ENSMALG00000019426	parn	94	94.224	ENSSPAG00000007095	parn	96	90.868	Stegastes_partitus
ENSMALG00000019426	parn	91	78.212	ENSSSCG00000007878	PARN	74	78.212	Sus_scrofa
ENSMALG00000019426	parn	93	75.271	ENSTGUG00000004971	PARN	86	75.812	Taeniopygia_guttata
ENSMALG00000019426	parn	94	89.228	ENSTNIG00000008252	parn	88	89.946	Tetraodon_nigroviridis
ENSMALG00000019426	parn	81	66.876	ENSTBEG00000010407	PARN	89	62.906	Tupaia_belangeri
ENSMALG00000019426	parn	82	79.671	ENSTTRG00000002843	PARN	88	69.107	Tursiops_truncatus
ENSMALG00000019426	parn	74	71.167	ENSUAMG00000008283	PARN	94	67.735	Ursus_americanus
ENSMALG00000019426	parn	91	78.585	ENSUMAG00000004527	PARN	83	78.585	Ursus_maritimus
ENSMALG00000019426	parn	89	75.425	ENSVPAG00000008968	PARN	85	75.425	Vicugna_pacos
ENSMALG00000019426	parn	91	78.399	ENSVVUG00000019509	PARN	83	78.399	Vulpes_vulpes
ENSMALG00000019426	parn	91	75.419	ENSXETG00000010994	parn	100	75.706	Xenopus_tropicalis
ENSMALG00000019426	parn	94	83.032	ENSXCOG00000015990	parn	95	81.272	Xiphophorus_couchianus
ENSMALG00000019426	parn	94	87.906	ENSXMAG00000014783	parn	96	82.496	Xiphophorus_maculatus