EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000019479 (Gene tree)
Gene ID: 109969287
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 6938 bases
Position: chrKV884860.1:226693-233630
Accession: 109969287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000028091	PRP38	PF03371.15	4.8e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000028606	-	3721	XM_020616035	ENSMALP00000028091	464 (aa)	XP_020471691	UPI0009B3AF11

Gene Model

Click here to download ENSMALG00000019479's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000019479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000019479	-	100	95.043	ENSATEG00000014482	-	100	95.043	Anabas_testudineus
ENSMALG00000019479	-	59	84.116	ENSBTAG00000047874	PRPF38B	93	60.886	Bos_taurus
ENSMALG00000019479	-	58	45.185	WBGene00022434	Y108G3AL.2	87	42.657	Caenorhabditis_elegans
ENSMALG00000019479	-	98	57.617	ENSCAFG00020010992	-	91	57.617	Canis_lupus_dingo
ENSMALG00000019479	-	59	84.116	ENSCHIG00000024357	-	93	60.886	Capra_hircus
ENSMALG00000019479	-	59	84.364	ENSCPOG00000039545	-	82	63.966	Cavia_porcellus
ENSMALG00000019479	-	59	83.942	ENSCLAG00000005801	-	82	63.136	Chinchilla_lanigera
ENSMALG00000019479	-	51	73.640	ENSCHOG00000008972	-	62	69.874	Choloepus_hoffmanni
ENSMALG00000019479	-	100	86.452	ENSCSEG00000015030	-	100	86.882	Cynoglossus_semilaevis
ENSMALG00000019479	-	59	82.246	ENSETEG00000014690	-	60	81.949	Echinops_telfairi
ENSMALG00000019479	-	100	67.495	ENSELUG00000010390	-	97	68.069	Esox_lucius
ENSMALG00000019479	-	100	74.843	ENSGMOG00000012080	-	99	74.792	Gadus_morhua
ENSMALG00000019479	-	99	59.846	ENSGALG00000001972	-	92	61.284	Gallus_gallus
ENSMALG00000019479	-	100	83.226	ENSGAFG00000008943	-	100	86.325	Gambusia_affinis
ENSMALG00000019479	-	99	61.886	ENSGAGG00000001563	-	83	64.182	Gopherus_agassizii
ENSMALG00000019479	-	59	84.364	ENSHGLG00000016583	PRPF38B	82	63.425	Heterocephalus_glaber_female
ENSMALG00000019479	-	59	84.364	ENSHGLG00100015525	-	82	63.425	Heterocephalus_glaber_male
ENSMALG00000019479	-	100	84.914	ENSHCOG00000001071	-	100	85.806	Hippocampus_comes
ENSMALG00000019479	-	100	85.654	ENSKMAG00000005540	-	100	85.865	Kryptolebias_marmoratus
ENSMALG00000019479	-	100	60.943	ENSLACG00000015511	-	97	59.510	Latimeria_chalumnae
ENSMALG00000019479	-	59	84.058	ENSMOCG00000020285	-	82	63.404	Microtus_ochrogaster
ENSMALG00000019479	-	100	86.724	ENSMMOG00000011639	-	100	86.724	Mola_mola
ENSMALG00000019479	-	58	84.871	ENSMODG00000002350	-	85	84.871	Monodelphis_domestica
ENSMALG00000019479	-	100	89.722	ENSONIG00000010129	-	100	89.507	Oreochromis_niloticus
ENSMALG00000019479	-	84	65.700	ENSOANG00000007343	-	64	82.746	Ornithorhynchus_anatinus
ENSMALG00000019479	-	100	86.638	ENSORLG00000015621	-	95	96.951	Oryzias_latipes
ENSMALG00000019479	-	100	86.853	ENSORLG00020016276	-	94	96.951	Oryzias_latipes_hni
ENSMALG00000019479	-	100	86.853	ENSORLG00015016270	-	100	86.853	Oryzias_latipes_hsok
ENSMALG00000019479	-	100	87.284	ENSOMEG00000022050	-	97	96.386	Oryzias_melastigma
ENSMALG00000019479	-	59	84.364	ENSOGAG00000027048	-	80	64.381	Otolemur_garnettii
ENSMALG00000019479	-	58	83.764	ENSOARG00000018899	-	97	59.211	Ovis_aries
ENSMALG00000019479	-	100	65.675	ENSPKIG00000017291	-	90	65.918	Paramormyrops_kingsleyae
ENSMALG00000019479	-	95	67.653	ENSPKIG00000004815	-	96	66.598	Paramormyrops_kingsleyae
ENSMALG00000019479	-	100	84.086	ENSPFOG00000004025	-	100	87.179	Poecilia_formosa
ENSMALG00000019479	-	100	84.086	ENSPLAG00000019842	-	100	87.179	Poecilia_latipinna
ENSMALG00000019479	-	100	83.871	ENSPMEG00000004807	-	97	86.966	Poecilia_mexicana
ENSMALG00000019479	-	100	82.796	ENSPREG00000015599	-	100	86.111	Poecilia_reticulata
ENSMALG00000019479	-	61	83.630	ENSPNAG00000017484	-	95	65.923	Pygocentrus_nattereri
ENSMALG00000019479	-	59	84.364	ENSRNOG00000020438	Prpf38b	81	64.208	Rattus_norvegicus
ENSMALG00000019479	-	94	69.213	ENSSFOG00015011251	-	85	89.024	Scleropages_formosus
ENSMALG00000019479	-	100	91.667	ENSSLDG00000023487	-	100	92.094	Seriola_lalandi_dorsalis
ENSMALG00000019479	-	98	63.690	ENSSPUG00000017742	-	77	61.489	Sphenodon_punctatus
ENSMALG00000019479	-	99	84.731	ENSTRUG00000011765	-	100	83.871	Takifugu_rubripes
ENSMALG00000019479	-	99	80.952	ENSTNIG00000015299	-	99	69.099	Tetraodon_nigroviridis
ENSMALG00000019479	-	59	75.182	ENSTBEG00000007504	-	88	58.085	Tupaia_belangeri
ENSMALG00000019479	-	59	84.727	ENSTTRG00000006479	-	83	63.482	Tursiops_truncatus
ENSMALG00000019479	-	59	69.708	ENSVPAG00000005541	-	91	54.331	Vicugna_pacos
ENSMALG00000019479	-	96	60.852	ENSXETG00000005260	prpf38b	57	81.787	Xenopus_tropicalis
ENSMALG00000019479	-	100	83.761	ENSXCOG00000008329	-	100	86.325	Xiphophorus_couchianus
ENSMALG00000019479	-	100	83.547	ENSXMAG00000023831	-	100	86.111	Xiphophorus_maculatus