EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMALG00000019612 (Gene tree)
Gene ID
109965981
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Plus strand
Length
43338 bases
Position
chrKV884793.1:15715-59052
Accession
109965981
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000028336RRM_1PF00076.223.5e-1711
ENSMALP00000028325RRM_1PF00076.223.7e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000028854-855XM_020610494ENSMALP00000028336284 (aa)XP_020466150UPI0009B306F0
ENSMALT00000028843-879XM_020610495ENSMALP00000028325292 (aa)XP_020466151-
Gene Model
Click here to download ENSMALG00000019612's gene model file
Pathways
Pathway IDPathway NameSource
malb03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000019612's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMALG00000019612pabpn15260.390ENSMALG00000016926PABPN1L7454.067
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000019612pabpn17771.739ENSG00000258643BCL2L2-PABPN16671.946Homo_sapiens
ENSMALG00000019612pabpn16781.773ENSG00000100836PABPN19282.051Homo_sapiens
ENSMALG00000019612pabpn110098.944ENSAPOG00000016425pabpn110098.944Acanthochromis_polyacanthus
ENSMALG00000019612pabpn16383.422ENSAMEG00000007048BCL2L2-PABPN19484.270Ailuropoda_melanoleuca
ENSMALG00000019612pabpn110096.853ENSACIG00000021744pabpn110096.853Amphilophus_citrinellus
ENSMALG00000019612pabpn17898.690ENSAOCG00000015805pabpn19998.690Amphiprion_ocellaris
ENSMALG00000019612pabpn17898.690ENSAPEG00000009623pabpn19998.690Amphiprion_percula
ENSMALG00000019612pabpn17899.127ENSATEG00000020531pabpn19999.127Anabas_testudineus
ENSMALG00000019612pabpn16384.492ENSACAG00000006185-8071.730Anolis_carolinensis
ENSMALG00000019612pabpn16683.077ENSANAG00000024513-8075.652Aotus_nancymaae
ENSMALG00000019612pabpn110096.516ENSACLG00000016374pabpn110096.516Astatotilapia_calliptera
ENSMALG00000019612pabpn110085.965ENSAMXG00000000452pabpn19997.391Astyanax_mexicanus
ENSMALG00000019612pabpn16084.483ENSBTAG00000050594-7679.798Bos_taurus
ENSMALG00000019612pabpn16683.077ENSBTAG00000006884PABPN18469.841Bos_taurus
ENSMALG00000019612pabpn16482.011ENSBTAG00000053753-6782.778Bos_taurus
ENSMALG00000019612pabpn15058.904WBGene00003904pabp-28655.000Caenorhabditis_elegans
ENSMALG00000019612pabpn17875.217ENSCJAG00000007960-7976.018Callithrix_jacchus
ENSMALG00000019612pabpn15579.394ENSCJAG00000004407-7880.128Callithrix_jacchus
ENSMALG00000019612pabpn16781.773ENSCAFG00000011482PABPN18270.635Canis_familiaris
ENSMALG00000019612pabpn16781.773ENSCAFG00020006651-8270.238Canis_lupus_dingo
ENSMALG00000019612pabpn16781.773ENSCAFG00020007298-8270.238Canis_lupus_dingo
ENSMALG00000019612pabpn16781.773ENSCHIG00000012184PABPN18270.238Capra_hircus
ENSMALG00000019612pabpn17771.739ENSTSYG00000033996BCL2L2-PABPN18782.051Carlito_syrichta
ENSMALG00000019612pabpn16781.773ENSCPOG00000025574PABPN16781.553Cavia_porcellus
ENSMALG00000019612pabpn17875.217ENSCCAG00000033954BCL2L2-PABPN17976.018Cebus_capucinus
ENSMALG00000019612pabpn17875.217ENSCATG00000038536BCL2L2-PABPN17976.018Cercocebus_atys
ENSMALG00000019612pabpn15180.537ENSCLAG00000012423PABPN15282.014Chinchilla_lanigera
ENSMALG00000019612pabpn16780.296ENSCSAG00000016036PABPN18269.048Chlorocebus_sabaeus
ENSMALG00000019612pabpn17071.981ENSCHOG00000004798BCL2L2-PABPN18770.192Choloepus_hoffmanni
ENSMALG00000019612pabpn15583.636ENSCPBG00000026060-8784.615Chrysemys_picta_bellii
ENSMALG00000019612pabpn17061.538ENSCING00000012468-8464.000Ciona_intestinalis
ENSMALG00000019612pabpn15962.857ENSCSAVG00000002001-8068.889Ciona_savignyi
ENSMALG00000019612pabpn16670.984ENSCANG00000030980-8364.035Colobus_angolensis_palliatus
ENSMALG00000019612pabpn17771.739ENSCANG00000009750BCL2L2-PABPN18782.051Colobus_angolensis_palliatus
ENSMALG00000019612pabpn16781.281ENSCGRG00001019696Pabpn18781.410Cricetulus_griseus_chok1gshd
ENSMALG00000019612pabpn15191.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSMALG00000019612pabpn18396.694ENSCSEG00000008774pabpn19996.943Cynoglossus_semilaevis
ENSMALG00000019612pabpn110094.218ENSCVAG00000003152pabpn110095.238Cyprinodon_variegatus
ENSMALG00000019612pabpn110095.775ENSDARG00000045373pabpn110097.273Danio_rerio
ENSMALG00000019612pabpn16354.645ENSDARG00000087996pabpn1l8659.184Danio_rerio
ENSMALG00000019612pabpn16781.773ENSDNOG00000023682PABPN18270.238Dasypus_novemcinctus
ENSMALG00000019612pabpn16781.281ENSDORG00000028966-8269.444Dipodomys_ordii
ENSMALG00000019612pabpn17857.692FBgn0005648Pabp29758.333Drosophila_melanogaster
ENSMALG00000019612pabpn17872.489ENSEBUG00000002322pabpn19772.489Eptatretus_burgeri
ENSMALG00000019612pabpn16782.266ENSEASG00005011716PABPN18570.498Equus_asinus_asinus
ENSMALG00000019612pabpn16782.564ENSECAG00000011652PABPN18570.356Equus_caballus
ENSMALG00000019612pabpn16779.803ENSEEUG00000012973-6978.325Erinaceus_europaeus
ENSMALG00000019612pabpn17894.017ENSELUG00000022654pabpn19994.017Esox_lucius
ENSMALG00000019612pabpn16781.773ENSFCAG00000031922PABPN18270.238Felis_catus
ENSMALG00000019612pabpn15580.606ENSFDAG00000018381BCL2L2-PABPN18781.410Fukomys_damarensis
ENSMALG00000019612pabpn17796.364ENSFHEG00000007215pabpn19994.760Fundulus_heteroclitus
ENSMALG00000019612pabpn110092.281ENSGMOG00000003922pabpn110095.088Gadus_morhua
ENSMALG00000019612pabpn16183.708ENSGALG00000052930-6279.909Gallus_gallus
ENSMALG00000019612pabpn17896.970ENSGAFG00000017099pabpn19996.970Gambusia_affinis
ENSMALG00000019612pabpn110097.535ENSGACG00000002167pabpn110097.535Gasterosteus_aculeatus
ENSMALG00000019612pabpn17875.217ENSGGOG00000022683-7976.018Gorilla_gorilla
ENSMALG00000019612pabpn17068.780ENSGGOG00000039675-8765.217Gorilla_gorilla
ENSMALG00000019612pabpn17365.368ENSGGOG00000025919-9068.613Gorilla_gorilla
ENSMALG00000019612pabpn17898.253ENSHBUG00000019523pabpn19998.253Haplochromis_burtoni
ENSMALG00000019612pabpn16781.281ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSMALG00000019612pabpn16474.468ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSMALG00000019612pabpn15562.195ENSHGLG00000009842-8764.052Heterocephalus_glaber_female
ENSMALG00000019612pabpn17671.493ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSMALG00000019612pabpn16474.468ENSHGLG00100015565-8765.502Heterocephalus_glaber_male
ENSMALG00000019612pabpn15568.902ENSHGLG00100018935-8874.051Heterocephalus_glaber_male
ENSMALG00000019612pabpn17897.817ENSHCOG00000004655pabpn19997.817Hippocampus_comes
ENSMALG00000019612pabpn17889.520ENSIPUG00000000180-9889.520Ictalurus_punctatus
ENSMALG00000019612pabpn110087.329ENSIPUG00000008085PABPN19997.817Ictalurus_punctatus
ENSMALG00000019612pabpn15581.212ENSSTOG00000029847BCL2L2-PABPN18782.051Ictidomys_tridecemlineatus
ENSMALG00000019612pabpn15581.212ENSJJAG00000023507Gm205218782.051Jaculus_jaculus
ENSMALG00000019612pabpn110097.193ENSKMAG00000018748pabpn110097.193Kryptolebias_marmoratus
ENSMALG00000019612pabpn110098.944ENSLBEG00000027266pabpn110098.944Labrus_bergylta
ENSMALG00000019612pabpn16288.764ENSLACG00000000646pabpn18585.052Latimeria_chalumnae
ENSMALG00000019612pabpn16567.539ENSLOCG00000004694pabpn1l9366.337Lepisosteus_oculatus
ENSMALG00000019612pabpn110091.930ENSLOCG00000000796pabpn110092.281Lepisosteus_oculatus
ENSMALG00000019612pabpn15081.757ENSLAFG00000031227-9182.734Loxodonta_africana
ENSMALG00000019612pabpn17771.739ENSMFAG00000032183BCL2L2-PABPN18782.051Macaca_fascicularis
ENSMALG00000019612pabpn16767.327ENSMMUG00000048382-8558.366Macaca_mulatta
ENSMALG00000019612pabpn17771.739ENSMMUG00000014747BCL2L2-PABPN19282.222Macaca_mulatta
ENSMALG00000019612pabpn16267.935ENSMNEG00000035750-9073.846Macaca_nemestrina
ENSMALG00000019612pabpn17875.217ENSMNEG00000045065BCL2L2-PABPN17976.018Macaca_nemestrina
ENSMALG00000019612pabpn17771.739ENSMLEG00000043862BCL2L2-PABPN18782.051Mandrillus_leucophaeus
ENSMALG00000019612pabpn15665.244ENSMLEG00000034623-9272.727Mandrillus_leucophaeus
ENSMALG00000019612pabpn110097.535ENSMAMG00000007979pabpn110097.535Mastacembelus_armatus
ENSMALG00000019612pabpn110098.239ENSMZEG00005011904pabpn110098.239Maylandia_zebra
ENSMALG00000019612pabpn17771.739ENSMAUG00000007383Gm205218369.721Mesocricetus_auratus
ENSMALG00000019612pabpn17875.758ENSMICG00000010002BCL2L2-PABPN17976.786Microcebus_murinus
ENSMALG00000019612pabpn17771.304ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSMALG00000019612pabpn110098.592ENSMMOG00000005405pabpn110098.592Mola_mola
ENSMALG00000019612pabpn16779.703ENSMODG00000004535-8570.115Monodelphis_domestica
ENSMALG00000019612pabpn17770.870MGP_CAROLIEiJ_G0019276Gm205216671.041Mus_caroli
ENSMALG00000019612pabpn16780.296MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSMALG00000019612pabpn17771.304ENSMUSG00000092232Gm205216671.493Mus_musculus
ENSMALG00000019612pabpn16780.788ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSMALG00000019612pabpn17771.304MGP_PahariEiJ_G0030294Gm205216671.493Mus_pahari
ENSMALG00000019612pabpn16780.788MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSMALG00000019612pabpn17771.304MGP_SPRETEiJ_G0020165Gm205216671.493Mus_spretus
ENSMALG00000019612pabpn16780.788MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSMALG00000019612pabpn15482.051ENSMPUG00000006775-9282.051Mustela_putorius_furo
ENSMALG00000019612pabpn16480.214ENSMLUG00000012452-8170.281Myotis_lucifugus
ENSMALG00000019612pabpn16382.353ENSMLUG00000003800-9483.146Myotis_lucifugus
ENSMALG00000019612pabpn16680.513ENSMLUG00000028677-8072.768Myotis_lucifugus
ENSMALG00000019612pabpn17772.174ENSNGAG00000019529Gm205216672.398Nannospalax_galili
ENSMALG00000019612pabpn110098.592ENSNBRG00000023955pabpn110098.592Neolamprologus_brichardi
ENSMALG00000019612pabpn15059.310ENSNLEG00000035292-9462.687Nomascus_leucogenys
ENSMALG00000019612pabpn16867.980ENSNLEG00000030598-7770.526Nomascus_leucogenys
ENSMALG00000019612pabpn16781.773ENSNLEG00000015007-7082.234Nomascus_leucogenys
ENSMALG00000019612pabpn16773.500ENSODEG00000003739-8863.786Octodon_degus
ENSMALG00000019612pabpn15971.591ENSODEG00000011555-8173.026Octodon_degus
ENSMALG00000019612pabpn17771.304ENSODEG00000002083BCL2L2-PABPN16481.726Octodon_degus
ENSMALG00000019612pabpn110098.592ENSONIG00000008112pabpn110098.592Oreochromis_niloticus
ENSMALG00000019612pabpn16781.281ENSOCUG00000016174PABPN19069.721Oryctolagus_cuniculus
ENSMALG00000019612pabpn110097.535ENSORLG00000027900pabpn110097.535Oryzias_latipes
ENSMALG00000019612pabpn110097.260ENSORLG00020004681pabpn110097.260Oryzias_latipes_hni
ENSMALG00000019612pabpn110097.260ENSORLG00015000018pabpn110097.260Oryzias_latipes_hsok
ENSMALG00000019612pabpn110098.239ENSOMEG00000016618pabpn110098.239Oryzias_melastigma
ENSMALG00000019612pabpn16781.773ENSOGAG00000008710PABPN18270.238Otolemur_garnettii
ENSMALG00000019612pabpn17771.739ENSOARG00000019336BCL2L2-PABPN16171.946Ovis_aries
ENSMALG00000019612pabpn15566.667ENSPPAG00000039421-8766.667Pan_paniscus
ENSMALG00000019612pabpn17771.739ENSPPAG00000028984BCL2L2-PABPN19282.051Pan_paniscus
ENSMALG00000019612pabpn16781.773ENSPPRG00000010567PABPN18270.238Panthera_pardus
ENSMALG00000019612pabpn15581.212ENSPTIG00000001063BCL2L2-PABPN18782.051Panthera_tigris_altaica
ENSMALG00000019612pabpn17862.500ENSPTRG00000047273-8959.917Pan_troglodytes
ENSMALG00000019612pabpn17875.217ENSPTRG00000006167BCL2L27976.018Pan_troglodytes
ENSMALG00000019612pabpn17875.217ENSPANG00000021100BCL2L2-PABPN17976.018Papio_anubis
ENSMALG00000019612pabpn16668.718ENSPANG00000023326-9074.615Papio_anubis
ENSMALG00000019612pabpn15869.512ENSPKIG00000008340pabpn1l8667.039Paramormyrops_kingsleyae
ENSMALG00000019612pabpn110095.423ENSPKIG00000008144-10095.423Paramormyrops_kingsleyae
ENSMALG00000019612pabpn110088.811ENSPKIG00000018052pabpn19994.783Paramormyrops_kingsleyae
ENSMALG00000019612pabpn110092.606ENSPMGG00000022027pabpn110092.606Periophthalmus_magnuspinnatus
ENSMALG00000019612pabpn17771.739ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSMALG00000019612pabpn16475.806ENSPMAG00000006212pabpn19469.231Petromyzon_marinus
ENSMALG00000019612pabpn16779.208ENSPCIG00000027751-8269.841Phascolarctos_cinereus
ENSMALG00000019612pabpn110096.599ENSPFOG00000010351pabpn110096.599Poecilia_formosa
ENSMALG00000019612pabpn110096.853ENSPLAG00000022696pabpn110096.853Poecilia_latipinna
ENSMALG00000019612pabpn17896.537ENSPMEG00000020856pabpn19996.537Poecilia_mexicana
ENSMALG00000019612pabpn110097.203ENSPREG00000011278pabpn110097.203Poecilia_reticulata
ENSMALG00000019612pabpn16682.474ENSPPYG00000005663PABPN18970.238Pongo_abelii
ENSMALG00000019612pabpn16469.271ENSPCAG00000005902PABPN18460.000Procavia_capensis
ENSMALG00000019612pabpn17875.758ENSPCOG00000028047BCL2L2-PABPN17976.786Propithecus_coquereli
ENSMALG00000019612pabpn16880.097ENSPVAG00000005270PABPN18269.323Pteropus_vampyrus
ENSMALG00000019612pabpn17898.253ENSPNYG00000013182pabpn19998.253Pundamilia_nyererei
ENSMALG00000019612pabpn110095.775ENSPNAG00000023526pabpn19998.253Pygocentrus_nattereri
ENSMALG00000019612pabpn15569.620ENSPNAG00000021666pabpn1l9565.641Pygocentrus_nattereri
ENSMALG00000019612pabpn16781.281ENSRNOG00000042195Pabpn18170.000Rattus_norvegicus
ENSMALG00000019612pabpn17071.635ENSRBIG00000039547-7866.038Rhinopithecus_bieti
ENSMALG00000019612pabpn17671.946ENSRBIG00000040762BCL2L2-PABPN16871.946Rhinopithecus_bieti
ENSMALG00000019612pabpn16970.048ENSRBIG00000042811-8770.732Rhinopithecus_bieti
ENSMALG00000019612pabpn16866.827ENSRROG00000036409-6167.662Rhinopithecus_roxellana
ENSMALG00000019612pabpn17671.946ENSRROG00000045535BCL2L2-PABPN18782.051Rhinopithecus_roxellana
ENSMALG00000019612pabpn17466.063ENSRROG00000040409-7866.038Rhinopithecus_roxellana
ENSMALG00000019612pabpn17767.901ENSSBOG00000026930BCL2L2-PABPN19282.051Saimiri_boliviensis_boliviensis
ENSMALG00000019612pabpn17861.702ENSSHAG00000007707-9858.723Sarcophilus_harrisii
ENSMALG00000019612pabpn16380.645ENSSHAG00000014841-8183.708Sarcophilus_harrisii
ENSMALG00000019612pabpn110089.474ENSSFOG00015012565pabpn110089.474Scleropages_formosus
ENSMALG00000019612pabpn16465.027ENSSFOG00015015833pabpn1l8466.120Scleropages_formosus
ENSMALG00000019612pabpn17896.943ENSSFOG00015014718pabpn19996.943Scleropages_formosus
ENSMALG00000019612pabpn110098.592ENSSMAG00000020157pabpn110098.592Scophthalmus_maximus
ENSMALG00000019612pabpn110098.944ENSSDUG00000020582pabpn110098.944Seriola_dumerili
ENSMALG00000019612pabpn17899.127ENSSLDG00000007118pabpn19999.127Seriola_lalandi_dorsalis
ENSMALG00000019612pabpn15086.301ENSSPUG00000018308-8784.615Sphenodon_punctatus
ENSMALG00000019612pabpn110097.895ENSSPAG00000021658pabpn110097.895Stegastes_partitus
ENSMALG00000019612pabpn16782.266ENSSSCG00000002023PABPN18570.498Sus_scrofa
ENSMALG00000019612pabpn17362.150ENSSSCG00000034805-7561.905Sus_scrofa
ENSMALG00000019612pabpn110097.535ENSTRUG00000023664pabpn110097.535Takifugu_rubripes
ENSMALG00000019612pabpn17198.010ENSTNIG00000005369pabpn19398.010Tetraodon_nigroviridis
ENSMALG00000019612pabpn16781.773ENSUAMG00000024460PABPN16482.234Ursus_americanus
ENSMALG00000019612pabpn17772.174ENSUMAG00000014288BCL2L2-PABPN16972.174Ursus_maritimus
ENSMALG00000019612pabpn17771.739ENSVVUG00000019912BCL2L2-PABPN17182.967Vulpes_vulpes
ENSMALG00000019612pabpn16586.010ENSXETG00000014597pabpn16983.333Xenopus_tropicalis
ENSMALG00000019612pabpn15884.884ENSXCOG00000005158pabpn19684.884Xiphophorus_couchianus
ENSMALG00000019612pabpn110097.279ENSXMAG00000006196pabpn110097.279Xiphophorus_maculatus

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