EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000019771 (Gene tree)
Gene ID: -
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 8390 bases
Position: chrKV884819.1:915009-923398
Accession: 109967533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000028551	Btz	PF09405.10	8.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000029069	-	1809	XM_020613175	ENSMALP00000028551	602 (aa)	XP_020468831	-

Gene Model

Click here to download ENSMALG00000019771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000019771's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000019771	casc3	84	85.484	ENSAPOG00000008467	casc3	60	97.938	Acanthochromis_polyacanthus
ENSMALG00000019771	casc3	98	73.411	ENSACIG00000000720	casc3	93	72.222	Amphilophus_citrinellus
ENSMALG00000019771	casc3	84	87.097	ENSAOCG00000016676	casc3	60	98.969	Amphiprion_ocellaris
ENSMALG00000019771	casc3	84	87.097	ENSAPEG00000006787	casc3	61	98.969	Amphiprion_percula
ENSMALG00000019771	casc3	80	96.000	ENSATEG00000017196	casc3	62	96.000	Anabas_testudineus
ENSMALG00000019771	casc3	83	45.471	ENSACAG00000002674	CASC3	57	77.228	Anolis_carolinensis
ENSMALG00000019771	casc3	65	70.588	ENSANAG00000034820	-	52	76.471	Aotus_nancymaae
ENSMALG00000019771	casc3	84	87.805	ENSACLG00000016198	casc3	62	97.000	Astatotilapia_calliptera
ENSMALG00000019771	casc3	83	82.143	ENSAMXG00000032452	casc3	60	87.629	Astyanax_mexicanus
ENSMALG00000019771	casc3	83	49.136	ENSCAFG00020018882	CASC3	75	49.425	Canis_lupus_dingo
ENSMALG00000019771	casc3	83	46.429	ENSCCAG00000033620	CASC3	59	82.105	Cebus_capucinus
ENSMALG00000019771	casc3	83	46.416	ENSCPBG00000004750	CASC3	69	78.218	Chrysemys_picta_bellii
ENSMALG00000019771	casc3	92	75.556	ENSCSEG00000010047	casc3	59	91.000	Cynoglossus_semilaevis
ENSMALG00000019771	casc3	84	85.600	ENSCVAG00000014935	casc3	65	70.504	Cyprinodon_variegatus
ENSMALG00000019771	casc3	72	75.969	ENSDARG00000029911	casc3	54	85.000	Danio_rerio
ENSMALG00000019771	casc3	83	50.096	ENSEASG00005002909	CASC3	75	49.905	Equus_asinus_asinus
ENSMALG00000019771	casc3	84	76.423	ENSELUG00000015093	casc3	61	86.458	Esox_lucius
ENSMALG00000019771	casc3	83	46.986	ENSFCAG00000014998	CASC3	78	47.069	Felis_catus
ENSMALG00000019771	casc3	84	83.065	ENSFHEG00000015793	casc3	62	92.000	Fundulus_heteroclitus
ENSMALG00000019771	casc3	80	90.090	ENSGAFG00000017148	casc3	53	91.919	Gambusia_affinis
ENSMALG00000019771	casc3	84	48.956	ENSGAGG00000008432	CASC3	82	50.192	Gopherus_agassizii
ENSMALG00000019771	casc3	99	42.595	ENSGGOG00000005067	CASC3	63	81.053	Gorilla_gorilla
ENSMALG00000019771	casc3	84	88.618	ENSHBUG00000013155	casc3	62	98.000	Haplochromis_burtoni
ENSMALG00000019771	casc3	78	80.488	ENSHCOG00000002664	casc3	57	93.684	Hippocampus_comes
ENSMALG00000019771	casc3	78	82.883	ENSIPUG00000002679	casc3	55	87.000	Ictalurus_punctatus
ENSMALG00000019771	casc3	84	85.385	ENSKMAG00000019507	casc3	65	97.938	Kryptolebias_marmoratus
ENSMALG00000019771	casc3	84	83.740	ENSLBEG00000005435	casc3	59	92.000	Labrus_bergylta
ENSMALG00000019771	casc3	81	43.682	ENSLACG00000013200	CASC3	55	66.667	Latimeria_chalumnae
ENSMALG00000019771	casc3	83	48.190	ENSMFAG00000041496	CASC3	76	48.485	Macaca_fascicularis
ENSMALG00000019771	casc3	80	95.000	ENSMAMG00000005235	casc3	62	95.000	Mastacembelus_armatus
ENSMALG00000019771	casc3	84	87.805	ENSMZEG00005003815	casc3	62	97.000	Maylandia_zebra
ENSMALG00000019771	casc3	90	44.667	ENSMGAG00000013247	CASC3	50	53.016	Meleagris_gallopavo
ENSMALG00000019771	casc3	75	45.652	ENSMAUG00000006023	Casc3	55	48.333	Mesocricetus_auratus
ENSMALG00000019771	casc3	90	94.000	ENSMMOG00000014339	casc3	65	94.000	Mola_mola
ENSMALG00000019771	casc3	83	45.423	ENSMODG00000013044	CASC3	69	52.174	Monodelphis_domestica
ENSMALG00000019771	casc3	83	49.186	ENSMUSG00000078676	Casc3	78	48.188	Mus_musculus
ENSMALG00000019771	casc3	83	49.458	MGP_SPRETEiJ_G0017943	Casc3	78	47.849	Mus_spretus
ENSMALG00000019771	casc3	84	88.618	ENSONIG00000009337	casc3	61	98.000	Oreochromis_niloticus
ENSMALG00000019771	casc3	84	80.488	ENSORLG00000023125	casc3	62	92.784	Oryzias_latipes
ENSMALG00000019771	casc3	83	46.809	ENSPPRG00000023670	CASC3	78	46.892	Panthera_pardus
ENSMALG00000019771	casc3	83	46.454	ENSPTIG00000010891	CASC3	78	46.536	Panthera_tigris_altaica
ENSMALG00000019771	casc3	72	72.800	ENSPKIG00000023186	casc3	54	80.198	Paramormyrops_kingsleyae
ENSMALG00000019771	casc3	73	91.525	ENSPFOG00000017632	casc3	78	95.918	Poecilia_formosa
ENSMALG00000019771	casc3	82	92.793	ENSPLAG00000005268	casc3	65	94.949	Poecilia_latipinna
ENSMALG00000019771	casc3	79	61.612	ENSPMEG00000010299	casc3	87	60.308	Poecilia_mexicana
ENSMALG00000019771	casc3	95	67.480	ENSPREG00000011856	casc3	81	73.913	Poecilia_reticulata
ENSMALG00000019771	casc3	64	79.167	ENSPCOG00000008183	CASC3	63	80.000	Propithecus_coquereli
ENSMALG00000019771	casc3	83	48.115	ENSPVAG00000008556	CASC3	50	47.139	Pteropus_vampyrus
ENSMALG00000019771	casc3	84	88.618	ENSPNYG00000011962	casc3	62	98.000	Pundamilia_nyererei
ENSMALG00000019771	casc3	83	83.036	ENSPNAG00000015928	casc3	60	88.660	Pygocentrus_nattereri
ENSMALG00000019771	casc3	83	50.288	ENSRNOG00000009716	Casc3	76	49.905	Rattus_norvegicus
ENSMALG00000019771	casc3	83	47.387	ENSSBOG00000031406	CASC3	65	81.250	Saimiri_boliviensis_boliviensis
ENSMALG00000019771	casc3	69	75.200	ENSSFOG00015002645	casc3	61	60.952	Scleropages_formosus
ENSMALG00000019771	casc3	81	90.991	ENSSMAG00000016096	casc3	60	93.137	Scophthalmus_maximus
ENSMALG00000019771	casc3	80	98.000	ENSSDUG00000016893	casc3	60	98.000	Seriola_dumerili
ENSMALG00000019771	casc3	84	75.099	ENSSLDG00000020308	casc3	94	68.197	Seriola_lalandi_dorsalis
ENSMALG00000019771	casc3	60	68.000	ENSSARG00000010378	CASC3	64	68.000	Sorex_araneus
ENSMALG00000019771	casc3	82	93.636	ENSSPAG00000023008	casc3	60	97.938	Stegastes_partitus
ENSMALG00000019771	casc3	84	84.553	ENSTRUG00000000673	casc3	58	93.000	Takifugu_rubripes
ENSMALG00000019771	casc3	57	72.000	ENSTTRG00000016896	CASC3	59	72.000	Tursiops_truncatus
ENSMALG00000019771	casc3	83	48.859	ENSUAMG00000015116	CASC3	78	46.536	Ursus_americanus
ENSMALG00000019771	casc3	83	48.289	ENSUMAG00000017697	CASC3	91	48.555	Ursus_maritimus
ENSMALG00000019771	casc3	82	90.090	ENSXMAG00000013937	casc3	61	91.919	Xiphophorus_maculatus