EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000020330 (Gene tree)
Gene ID: 109964055
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 10070 bases
Position: chrKV884771.1:1460935-1471004
Accession: 109964055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000029389	RRM_5	PF13893.6	3.1e-06	1	1
ENSMALP00000029415	RRM_5	PF13893.6	3.3e-06	1	1
ENSMALP00000029389	RRM_1	PF00076.22	5.9e-14	1	1
ENSMALP00000029415	RRM_1	PF00076.22	6.3e-14	1	1
ENSMALP00000029389	SAP	PF02037.27	3e-09	1	1
ENSMALP00000029415	SAP	PF02037.27	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000029916	-	4086	-	ENSMALP00000029389	804 (aa)	-	-
ENSMALT00000029943	-	4006	XM_020607083	ENSMALP00000029415	842 (aa)	XP_020462739	UPI0009B3692C

Gene Model

Click here to download ENSMALG00000020330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000020330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000020330	safb	70	42.097	ENSG00000160633	SAFB	78	64.754	Homo_sapiens
ENSMALG00000020330	safb	100	82.861	ENSAPOG00000022508	safb	100	83.215	Acanthochromis_polyacanthus
ENSMALG00000020330	safb	70	41.262	ENSAMEG00000012254	SAFB	94	40.798	Ailuropoda_melanoleuca
ENSMALG00000020330	safb	100	74.232	ENSACIG00000006247	safb	100	75.296	Amphilophus_citrinellus
ENSMALG00000020330	safb	100	82.302	ENSAOCG00000006308	safb	100	82.302	Amphiprion_ocellaris
ENSMALG00000020330	safb	100	82.506	ENSAPEG00000023342	safb	100	82.861	Amphiprion_percula
ENSMALG00000020330	safb	100	82.981	ENSATEG00000004998	safb	100	83.333	Anabas_testudineus
ENSMALG00000020330	safb	53	40.397	ENSAPLG00000005780	-	98	44.268	Anas_platyrhynchos
ENSMALG00000020330	safb	63	43.863	ENSAPLG00000006355	-	99	49.238	Anas_platyrhynchos
ENSMALG00000020330	safb	50	58.371	ENSACAG00000016893	-	96	42.572	Anolis_carolinensis
ENSMALG00000020330	safb	70	43.499	ENSANAG00000028821	SAFB	93	42.274	Aotus_nancymaae
ENSMALG00000020330	safb	100	77.594	ENSACLG00000001926	safb	100	77.712	Astatotilapia_calliptera
ENSMALG00000020330	safb	98	62.485	ENSAMXG00000018154	safb	100	62.695	Astyanax_mexicanus
ENSMALG00000020330	safb	98	44.432	ENSBTAG00000007875	SAFB	93	41.986	Bos_taurus
ENSMALG00000020330	safb	70	41.297	ENSCAFG00000018803	SAFB	81	40.919	Canis_familiaris
ENSMALG00000020330	safb	70	41.297	ENSCAFG00020018943	SAFB	93	40.919	Canis_lupus_dingo
ENSMALG00000020330	safb	98	44.332	ENSCHIG00000007262	SAFB	93	41.918	Capra_hircus
ENSMALG00000020330	safb	52	44.979	ENSTSYG00000001851	-	89	43.983	Carlito_syrichta
ENSMALG00000020330	safb	70	43.087	ENSCCAG00000020193	SAFB	93	42.111	Cebus_capucinus
ENSMALG00000020330	safb	70	41.628	ENSCATG00000029994	SAFB	93	41.450	Cercocebus_atys
ENSMALG00000020330	safb	68	40.650	ENSCLAG00000007734	SAFB	93	43.730	Chinchilla_lanigera
ENSMALG00000020330	safb	70	41.628	ENSCSAG00000009949	SAFB	93	41.450	Chlorocebus_sabaeus
ENSMALG00000020330	safb	64	31.986	ENSCHOG00000003208	SAFB	87	36.248	Choloepus_hoffmanni
ENSMALG00000020330	safb	90	43.168	ENSCPBG00000010928	-	97	44.651	Chrysemys_picta_bellii
ENSMALG00000020330	safb	90	45.487	ENSCPBG00000010936	-	98	45.626	Chrysemys_picta_bellii
ENSMALG00000020330	safb	83	47.205	ENSCANG00000004774	-	90	46.584	Colobus_angolensis_palliatus
ENSMALG00000020330	safb	98	41.781	ENSCANG00000019754	-	92	41.516	Colobus_angolensis_palliatus
ENSMALG00000020330	safb	68	40.345	ENSCGRG00001002254	Safb	93	40.794	Cricetulus_griseus_chok1gshd
ENSMALG00000020330	safb	57	36.813	ENSCGRG00000011529	Safb	87	38.217	Cricetulus_griseus_crigri
ENSMALG00000020330	safb	99	63.853	ENSCSEG00000019870	safb	100	67.186	Cynoglossus_semilaevis
ENSMALG00000020330	safb	100	63.432	ENSCVAG00000002226	safb	100	64.142	Cyprinodon_variegatus
ENSMALG00000020330	safb	97	61.876	ENSDARG00000020467	safb	98	61.574	Danio_rerio
ENSMALG00000020330	safb	70	41.250	ENSDNOG00000015746	SAFB	95	38.796	Dasypus_novemcinctus
ENSMALG00000020330	safb	68	42.180	ENSDORG00000016200	Safb	89	39.886	Dipodomys_ordii
ENSMALG00000020330	safb	59	37.259	ENSETEG00000018679	SAFB	66	35.579	Echinops_telfairi
ENSMALG00000020330	safb	68	41.556	ENSEASG00005023019	SAFB	93	42.729	Equus_asinus_asinus
ENSMALG00000020330	safb	68	41.914	ENSECAG00000018659	SAFB	83	41.584	Equus_caballus
ENSMALG00000020330	safb	99	64.055	ENSELUG00000022327	safb	99	64.253	Esox_lucius
ENSMALG00000020330	safb	70	41.460	ENSFCAG00000011835	SAFB	93	40.497	Felis_catus
ENSMALG00000020330	safb	68	43.069	ENSFALG00000013882	-	87	45.186	Ficedula_albicollis
ENSMALG00000020330	safb	83	48.993	ENSFDAG00000020306	SAFB	91	51.128	Fukomys_damarensis
ENSMALG00000020330	safb	100	66.038	ENSFHEG00000004219	safb	100	67.217	Fundulus_heteroclitus
ENSMALG00000020330	safb	100	65.962	ENSGMOG00000014280	safb	100	66.784	Gadus_morhua
ENSMALG00000020330	safb	70	42.581	ENSGALG00000013365	-	97	45.130	Gallus_gallus
ENSMALG00000020330	safb	68	41.956	ENSGALG00000001948	-	93	47.991	Gallus_gallus
ENSMALG00000020330	safb	100	65.000	ENSGAFG00000016162	safb	100	65.114	Gambusia_affinis
ENSMALG00000020330	safb	100	74.913	ENSGACG00000011385	safb	100	75.377	Gasterosteus_aculeatus
ENSMALG00000020330	safb	99	47.505	ENSGAGG00000008424	-	98	48.754	Gopherus_agassizii
ENSMALG00000020330	safb	63	52.564	ENSGAGG00000017702	-	90	53.277	Gopherus_agassizii
ENSMALG00000020330	safb	70	42.254	ENSGGOG00000015109	SAFB	93	41.163	Gorilla_gorilla
ENSMALG00000020330	safb	100	72.308	ENSHBUG00000009218	safb	100	71.361	Haplochromis_burtoni
ENSMALG00000020330	safb	68	41.548	ENSHGLG00000015883	SAFB	93	41.394	Heterocephalus_glaber_female
ENSMALG00000020330	safb	84	46.012	ENSHGLG00100004228	SAFB	75	40.661	Heterocephalus_glaber_male
ENSMALG00000020330	safb	94	63.396	ENSHCOG00000001705	safb	99	64.780	Hippocampus_comes
ENSMALG00000020330	safb	99	62.285	ENSIPUG00000024869	safb2	99	63.127	Ictalurus_punctatus
ENSMALG00000020330	safb	64	38.655	ENSSTOG00000002783	SAFB	96	39.038	Ictidomys_tridecemlineatus
ENSMALG00000020330	safb	100	76.269	ENSKMAG00000022308	safb	100	76.269	Kryptolebias_marmoratus
ENSMALG00000020330	safb	100	80.841	ENSLBEG00000006015	safb	100	80.841	Labrus_bergylta
ENSMALG00000020330	safb	70	43.720	ENSLACG00000018090	SAFB	98	49.570	Latimeria_chalumnae
ENSMALG00000020330	safb	98	64.129	ENSLOCG00000003613	safb	99	64.352	Lepisosteus_oculatus
ENSMALG00000020330	safb	98	42.140	ENSLAFG00000003840	SAFB	94	41.757	Loxodonta_africana
ENSMALG00000020330	safb	70	41.406	ENSMFAG00000003885	SAFB	93	41.413	Macaca_fascicularis
ENSMALG00000020330	safb	98	44.683	ENSMMUG00000017970	SAFB	93	43.444	Macaca_mulatta
ENSMALG00000020330	safb	70	40.032	ENSMNEG00000035637	SAFB	92	45.985	Macaca_nemestrina
ENSMALG00000020330	safb	69	39.052	ENSMLEG00000038637	SAFB	93	40.289	Mandrillus_leucophaeus
ENSMALG00000020330	safb	100	86.761	ENSMAMG00000003357	safb	91	86.761	Mastacembelus_armatus
ENSMALG00000020330	safb	100	80.846	ENSMZEG00005009120	safb	100	80.964	Maylandia_zebra
ENSMALG00000020330	safb	68	39.535	ENSMGAG00000001101	-	98	43.674	Meleagris_gallopavo
ENSMALG00000020330	safb	90	38.491	ENSMICG00000046795	-	95	39.303	Microcebus_murinus
ENSMALG00000020330	safb	70	41.734	ENSMICG00000008739	-	93	41.796	Microcebus_murinus
ENSMALG00000020330	safb	98	42.464	ENSMODG00000001236	SAFB	95	40.749	Monodelphis_domestica
ENSMALG00000020330	safb	68	39.843	MGP_CAROLIEiJ_G0021780	Safb	93	40.307	Mus_caroli
ENSMALG00000020330	safb	68	39.843	ENSMUSG00000071054	Safb	93	40.416	Mus_musculus
ENSMALG00000020330	safb	70	41.357	ENSMPUG00000006123	SAFB	87	41.657	Mustela_putorius_furo
ENSMALG00000020330	safb	97	44.277	ENSMLUG00000001081	SAFB	95	41.126	Myotis_lucifugus
ENSMALG00000020330	safb	68	40.449	ENSNGAG00000019882	Safb	93	40.839	Nannospalax_galili
ENSMALG00000020330	safb	70	42.097	ENSNLEG00000013551	SAFB	97	41.417	Nomascus_leucogenys
ENSMALG00000020330	safb	63	39.280	ENSOPRG00000011561	-	97	39.448	Ochotona_princeps
ENSMALG00000020330	safb	68	40.916	ENSODEG00000014838	SAFB	93	41.477	Octodon_degus
ENSMALG00000020330	safb	100	80.399	ENSONIG00000002318	safb	100	80.751	Oreochromis_niloticus
ENSMALG00000020330	safb	89	39.806	ENSOCUG00000014628	SAFB	94	38.639	Oryctolagus_cuniculus
ENSMALG00000020330	safb	99	73.159	ENSORLG00000016989	safb	100	73.122	Oryzias_latipes
ENSMALG00000020330	safb	99	66.169	ENSORLG00020000404	safb	100	64.976	Oryzias_latipes_hni
ENSMALG00000020330	safb	100	73.424	ENSORLG00015010733	safb	100	73.294	Oryzias_latipes_hsok
ENSMALG00000020330	safb	100	73.254	ENSOMEG00000009066	safb	100	73.491	Oryzias_melastigma
ENSMALG00000020330	safb	68	42.620	ENSOGAG00000027769	SAFB	92	42.500	Otolemur_garnettii
ENSMALG00000020330	safb	86	39.187	ENSOARG00000007856	-	100	38.542	Ovis_aries
ENSMALG00000020330	safb	98	40.956	ENSOARG00000007662	-	93	40.565	Ovis_aries
ENSMALG00000020330	safb	70	42.147	ENSPPAG00000035129	SAFB	93	41.112	Pan_paniscus
ENSMALG00000020330	safb	70	41.460	ENSPPRG00000017197	SAFB	93	40.497	Panthera_pardus
ENSMALG00000020330	safb	70	41.875	ENSPTRG00000010335	SAFB	93	41.112	Pan_troglodytes
ENSMALG00000020330	safb	70	41.406	ENSPANG00000007770	SAFB	93	41.413	Papio_anubis
ENSMALG00000020330	safb	99	63.039	ENSPKIG00000009902	safb	99	63.039	Paramormyrops_kingsleyae
ENSMALG00000020330	safb	99	47.363	ENSPSIG00000011679	-	98	48.884	Pelodiscus_sinensis
ENSMALG00000020330	safb	99	46.452	ENSPSIG00000009367	-	96	45.838	Pelodiscus_sinensis
ENSMALG00000020330	safb	57	47.898	ENSPCIG00000009504	-	99	47.656	Phascolarctos_cinereus
ENSMALG00000020330	safb	100	66.901	ENSPFOG00000007745	safb	100	67.488	Poecilia_formosa
ENSMALG00000020330	safb	100	64.189	ENSPLAG00000001614	safb	100	64.752	Poecilia_latipinna
ENSMALG00000020330	safb	100	66.784	ENSPMEG00000021023	safb	100	67.371	Poecilia_mexicana
ENSMALG00000020330	safb	100	65.087	ENSPREG00000012496	safb	100	65.820	Poecilia_reticulata
ENSMALG00000020330	safb	70	42.097	ENSPPYG00000009428	SAFB	93	41.240	Pongo_abelii
ENSMALG00000020330	safb	68	38.259	ENSPCAG00000006475	SAFB	92	39.798	Procavia_capensis
ENSMALG00000020330	safb	98	41.348	ENSPCOG00000014090	SAFB	93	41.458	Propithecus_coquereli
ENSMALG00000020330	safb	98	40.611	ENSPVAG00000004913	SAFB	93	37.696	Pteropus_vampyrus
ENSMALG00000020330	safb	99	62.950	ENSPNAG00000021838	safb	99	64.576	Pygocentrus_nattereri
ENSMALG00000020330	safb	70	40.722	ENSRBIG00000042509	SAFB	92	40.749	Rhinopithecus_bieti
ENSMALG00000020330	safb	70	41.287	ENSRROG00000029278	SAFB	92	41.796	Rhinopithecus_roxellana
ENSMALG00000020330	safb	70	43.317	ENSSBOG00000026291	SAFB	93	42.146	Saimiri_boliviensis_boliviensis
ENSMALG00000020330	safb	99	62.171	ENSSFOG00015008156	safb	99	62.171	Scleropages_formosus
ENSMALG00000020330	safb	100	80.801	ENSSMAG00000009316	safb	100	81.861	Scophthalmus_maximus
ENSMALG00000020330	safb	100	79.976	ENSSDUG00000009652	safb	100	80.448	Seriola_dumerili
ENSMALG00000020330	safb	100	83.863	ENSSLDG00000001670	safb	100	85.512	Seriola_lalandi_dorsalis
ENSMALG00000020330	safb	64	40.320	ENSSARG00000010475	SAFB	98	38.150	Sorex_araneus
ENSMALG00000020330	safb	60	41.386	ENSSPUG00000009747	-	99	40.920	Sphenodon_punctatus
ENSMALG00000020330	safb	99	75.089	ENSSPAG00000015682	safb	99	75.209	Stegastes_partitus
ENSMALG00000020330	safb	98	42.584	ENSSSCG00000013522	SAFB	96	41.544	Sus_scrofa
ENSMALG00000020330	safb	68	43.822	ENSTGUG00000000489	-	96	50.230	Taeniopygia_guttata
ENSMALG00000020330	safb	68	42.998	ENSTGUG00000000502	-	96	46.007	Taeniopygia_guttata
ENSMALG00000020330	safb	100	75.414	ENSTRUG00000003567	safb	100	75.414	Takifugu_rubripes
ENSMALG00000020330	safb	96	63.659	ENSTNIG00000015470	safb	100	63.559	Tetraodon_nigroviridis
ENSMALG00000020330	safb	80	75.000	ENSTTRG00000013588	SAFB	77	75.000	Tursiops_truncatus
ENSMALG00000020330	safb	75	42.697	ENSUMAG00000009734	SAFB	76	55.102	Ursus_maritimus
ENSMALG00000020330	safb	70	41.732	ENSVVUG00000013720	SAFB	81	41.240	Vulpes_vulpes
ENSMALG00000020330	safb	68	43.434	ENSXETG00000008755	safb	95	47.232	Xenopus_tropicalis
ENSMALG00000020330	safb	100	67.136	ENSXMAG00000003458	safb	100	67.723	Xiphophorus_maculatus