EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMALG00000020407 (Gene tree)
Gene ID
109962837
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding protein fox-1 homolog 3-like
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Plus strand
Length
193136 bases
Position
chrKV884756.1:964189-1157324
Accession
109962837
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000029498Fox-1_CPF12414.84.9e-4311
ENSMALP00000029530Fox-1_CPF12414.86.6e-4311
ENSMALP00000029516Fox-1_CPF12414.88.2e-4311
ENSMALP00000029498RRM_1PF00076.221.5e-1811
ENSMALP00000029516RRM_1PF00076.221.5e-1811
ENSMALP00000029530RRM_1PF00076.220.0001611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000030058-1450XM_020604884ENSMALP00000029530365 (aa)XP_020460540-
ENSMALT00000030044-2043-ENSMALP00000029516365 (aa)--
ENSMALT00000030026-1697XM_020604880ENSMALP00000029498367 (aa)XP_020460536-
Gene Model
Click here to download ENSMALG00000020407's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000020407's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMALG00000020407rbfox3b10082.289ENSMALG00000018270-10083.106
ENSMALG00000020407rbfox3b5364.126ENSMALG00000000623rbfox29465.919
ENSMALG00000020407rbfox3b9564.167ENSMALG00000003337rbfox18768.060
ENSMALG00000020407rbfox3b8658.434ENSMALG00000009384rbfox1l9150.700
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000020407rbfox3b8179.000ENSG00000167281RBFOX39989.231Homo_sapiens
ENSMALG00000020407rbfox3b10069.293ENSAPOG00000015658-9169.565Acanthochromis_polyacanthus
ENSMALG00000020407rbfox3b10098.093ENSAPOG00000021630rbfox3b10097.808Acanthochromis_polyacanthus
ENSMALG00000020407rbfox3b8975.652ENSAMEG00000014170RBFOX38876.945Ailuropoda_melanoleuca
ENSMALG00000020407rbfox3b8593.269ENSACIG00000010817rbfox3b9993.269Amphilophus_citrinellus
ENSMALG00000020407rbfox3b8469.939ENSACIG00000003768-9070.552Amphilophus_citrinellus
ENSMALG00000020407rbfox3b10098.093ENSAOCG00000012358rbfox3b10098.093Amphiprion_ocellaris
ENSMALG00000020407rbfox3b10078.747ENSAOCG00000010786-9779.564Amphiprion_ocellaris
ENSMALG00000020407rbfox3b10088.767ENSAPEG00000019081rbfox3b9988.219Amphiprion_percula
ENSMALG00000020407rbfox3b9272.778ENSAPEG00000015891-8973.333Amphiprion_percula
ENSMALG00000020407rbfox3b8586.550ENSATEG00000019945rbfox3b9987.719Anabas_testudineus
ENSMALG00000020407rbfox3b8179.000ENSATEG00000023101-9679.365Anabas_testudineus
ENSMALG00000020407rbfox3b9879.666ENSACAG00000016093RBFOX39980.447Anolis_carolinensis
ENSMALG00000020407rbfox3b8178.667ENSANAG00000023457RBFOX310081.529Aotus_nancymaae
ENSMALG00000020407rbfox3b10097.283ENSACLG00000020011rbfox3b10096.805Astatotilapia_calliptera
ENSMALG00000020407rbfox3b10081.471ENSACLG00000025552-10082.289Astatotilapia_calliptera
ENSMALG00000020407rbfox3b9785.876ENSAMXG00000042841rbfox3b10085.311Astyanax_mexicanus
ENSMALG00000020407rbfox3b10082.759ENSAMXG00000037246rbfox3a10083.871Astyanax_mexicanus
ENSMALG00000020407rbfox3b6980.784ENSBTAG00000006280RBFOX310065.994Bos_taurus
ENSMALG00000020407rbfox3b8173.913ENSCJAG00000009563RBFOX310071.191Callithrix_jacchus
ENSMALG00000020407rbfox3b6584.583ENSCAFG00000005547RBFOX38587.815Canis_familiaris
ENSMALG00000020407rbfox3b8167.341ENSCAFG00020008126RBFOX39670.914Canis_lupus_dingo
ENSMALG00000020407rbfox3b8167.147ENSCHIG00000009124RBFOX39670.914Capra_hircus
ENSMALG00000020407rbfox3b8167.723ENSTSYG00000029617RBFOX310071.547Carlito_syrichta
ENSMALG00000020407rbfox3b8168.571ENSCPOG00000021703RBFOX310070.330Cavia_porcellus
ENSMALG00000020407rbfox3b8178.667ENSCCAG00000028450RBFOX310081.529Cebus_capucinus
ENSMALG00000020407rbfox3b8179.000ENSCATG00000018349RBFOX310081.847Cercocebus_atys
ENSMALG00000020407rbfox3b8168.966ENSCLAG00000006449RBFOX310070.718Chinchilla_lanigera
ENSMALG00000020407rbfox3b8179.000ENSCSAG00000002355RBFOX310081.847Chlorocebus_sabaeus
ENSMALG00000020407rbfox3b8882.716ENSCPBG00000010904RBFOX310082.372Chrysemys_picta_bellii
ENSMALG00000020407rbfox3b8179.000ENSCANG00000043120RBFOX310081.847Colobus_angolensis_palliatus
ENSMALG00000020407rbfox3b8167.241ENSCGRG00001019476Rbfox310070.799Cricetulus_griseus_chok1gshd
ENSMALG00000020407rbfox3b8167.241ENSCGRG00000003268Rbfox310070.799Cricetulus_griseus_crigri
ENSMALG00000020407rbfox3b10076.965ENSCSEG00000020606RBFOX310076.423Cynoglossus_semilaevis
ENSMALG00000020407rbfox3b10079.564ENSCSEG00000015567RBFOX39780.381Cynoglossus_semilaevis
ENSMALG00000020407rbfox3b10098.093ENSCVAG00000006882rbfox3b10098.093Cyprinodon_variegatus
ENSMALG00000020407rbfox3b9075.684ENSDARG00000074310rbfox3b9792.228Danio_rerio
ENSMALG00000020407rbfox3b10083.019ENSDARG00000010083rbfox3a10084.615Danio_rerio
ENSMALG00000020407rbfox3b6668.621ENSDNOG00000039391RBFOX39658.108Dasypus_novemcinctus
ENSMALG00000020407rbfox3b8162.500ENSDORG00000005352Rbfox310061.838Dipodomys_ordii
ENSMALG00000020407rbfox3b7756.207ENSEBUG00000013559RBFOX38853.968Eptatretus_burgeri
ENSMALG00000020407rbfox3b9763.881ENSEBUG00000002129RBFOX39568.732Eptatretus_burgeri
ENSMALG00000020407rbfox3b8179.139ENSEASG00005005059RBFOX310081.329Equus_asinus_asinus
ENSMALG00000020407rbfox3b8178.808ENSECAG00000023811RBFOX310081.013Equus_caballus
ENSMALG00000020407rbfox3b7278.824ENSEEUG00000013974RBFOX37688.000Erinaceus_europaeus
ENSMALG00000020407rbfox3b10094.005ENSELUG00000017963rbfox3b10094.005Esox_lucius
ENSMALG00000020407rbfox3b9878.611ENSFCAG00000002555RBFOX310080.892Felis_catus
ENSMALG00000020407rbfox3b9067.033ENSFALG00000012288RBFOX38967.493Ficedula_albicollis
ENSMALG00000020407rbfox3b8163.143ENSFDAG00000007489RBFOX310065.110Fukomys_damarensis
ENSMALG00000020407rbfox3b8291.946ENSFHEG00000008550rbfox3b10091.946Fundulus_heteroclitus
ENSMALG00000020407rbfox3b8567.778ENSGMOG00000019304-9668.421Gadus_morhua
ENSMALG00000020407rbfox3b9881.006ENSGALG00000032889RBFOX39982.913Gallus_gallus
ENSMALG00000020407rbfox3b10091.008ENSGAFG00000005025rbfox3b10091.008Gambusia_affinis
ENSMALG00000020407rbfox3b8169.054ENSGACG00000002138-9670.879Gasterosteus_aculeatus
ENSMALG00000020407rbfox3b9882.913ENSGAGG00000020025RBFOX310082.692Gopherus_agassizii
ENSMALG00000020407rbfox3b8179.000ENSGGOG00000012546RBFOX310081.847Gorilla_gorilla
ENSMALG00000020407rbfox3b9081.024ENSHBUG00000023098-9581.928Haplochromis_burtoni
ENSMALG00000020407rbfox3b10097.548ENSHBUG00000018099rbfox3b10097.548Haplochromis_burtoni
ENSMALG00000020407rbfox3b8167.898ENSHGLG00000008679RBFOX310069.399Heterocephalus_glaber_female
ENSMALG00000020407rbfox3b8164.773ENSHGLG00100014739RBFOX39666.393Heterocephalus_glaber_male
ENSMALG00000020407rbfox3b8572.756ENSHCOG00000001863RBFOX39272.293Hippocampus_comes
ENSMALG00000020407rbfox3b9878.393ENSHCOG00000007444RBFOX39380.000Hippocampus_comes
ENSMALG00000020407rbfox3b8573.837ENSIPUG00000021966rbfox3b9883.712Ictalurus_punctatus
ENSMALG00000020407rbfox3b10081.432ENSIPUG00000012010rbfox3a10083.024Ictalurus_punctatus
ENSMALG00000020407rbfox3b8162.829ENSSTOG00000026817RBFOX310065.831Ictidomys_tridecemlineatus
ENSMALG00000020407rbfox3b8166.571ENSJJAG00000014167Rbfox310070.914Jaculus_jaculus
ENSMALG00000020407rbfox3b10098.093ENSKMAG00000006726rbfox3b10098.093Kryptolebias_marmoratus
ENSMALG00000020407rbfox3b10085.014ENSLBEG00000022508-10085.014Labrus_bergylta
ENSMALG00000020407rbfox3b10097.534ENSLBEG00000004030rbfox3b10097.534Labrus_bergylta
ENSMALG00000020407rbfox3b8870.986ENSLACG00000018409-9072.394Latimeria_chalumnae
ENSMALG00000020407rbfox3b5060.326ENSLACG00000000021-9562.500Latimeria_chalumnae
ENSMALG00000020407rbfox3b8887.423ENSLOCG00000012267rbfox3a9889.264Lepisosteus_oculatus
ENSMALG00000020407rbfox3b8973.034ENSLAFG00000016623RBFOX39670.637Loxodonta_africana
ENSMALG00000020407rbfox3b8167.630ENSMFAG00000002247RBFOX310071.468Macaca_fascicularis
ENSMALG00000020407rbfox3b8179.000ENSMMUG00000023028RBFOX310081.847Macaca_mulatta
ENSMALG00000020407rbfox3b8178.667ENSMNEG00000041147RBFOX310081.529Macaca_nemestrina
ENSMALG00000020407rbfox3b8179.000ENSMLEG00000025686RBFOX310081.847Mandrillus_leucophaeus
ENSMALG00000020407rbfox3b8587.500ENSMAMG00000019810rbfox3b9986.859Mastacembelus_armatus
ENSMALG00000020407rbfox3b8979.448ENSMAMG00000020600-9379.385Mastacembelus_armatus
ENSMALG00000020407rbfox3b8361.905ENSMZEG00005003055-8161.905Maylandia_zebra
ENSMALG00000020407rbfox3b10097.548ENSMZEG00005000781rbfox3b10097.260Maylandia_zebra
ENSMALG00000020407rbfox3b6079.091ENSMGAG00000005600RBFOX38379.452Meleagris_gallopavo
ENSMALG00000020407rbfox3b8168.588ENSMAUG00000013543Rbfox310070.442Mesocricetus_auratus
ENSMALG00000020407rbfox3b8880.556ENSMICG00000014898RBFOX310080.831Microcebus_murinus
ENSMALG00000020407rbfox3b8166.571ENSMOCG00000015373Rbfox310070.166Microtus_ochrogaster
ENSMALG00000020407rbfox3b10095.664ENSMMOG00000020193rbfox3b10095.664Mola_mola
ENSMALG00000020407rbfox3b9879.109ENSMODG00000002089RBFOX39981.006Monodelphis_domestica
ENSMALG00000020407rbfox3b8177.667MGP_CAROLIEiJ_G0017487Rbfox39689.209Mus_caroli
ENSMALG00000020407rbfox3b8179.402ENSMUSG00000025576Rbfox39689.209Mus_musculus
ENSMALG00000020407rbfox3b8178.405MGP_PahariEiJ_G0018614Rbfox39689.928Mus_pahari
ENSMALG00000020407rbfox3b8178.000MGP_SPRETEiJ_G0018331Rbfox39689.209Mus_spretus
ENSMALG00000020407rbfox3b8971.233ENSMPUG00000012319RBFOX39572.678Mustela_putorius_furo
ENSMALG00000020407rbfox3b8167.241ENSNGAG00000018006Rbfox310070.994Nannospalax_galili
ENSMALG00000020407rbfox3b9075.455ENSNBRG00000022885-9174.699Neolamprologus_brichardi
ENSMALG00000020407rbfox3b10096.458ENSNBRG00000010102rbfox3b10096.458Neolamprologus_brichardi
ENSMALG00000020407rbfox3b8555.096ENSNLEG00000000153-9555.272Nomascus_leucogenys
ENSMALG00000020407rbfox3b7985.106ENSMEUG00000004218-10053.056Notamacropus_eugenii
ENSMALG00000020407rbfox3b6875.393ENSOPRG00000016279-7181.667Ochotona_princeps
ENSMALG00000020407rbfox3b8180.731ENSODEG00000009433RBFOX310081.270Octodon_degus
ENSMALG00000020407rbfox3b9279.646ENSONIG00000007282-9980.531Oreochromis_niloticus
ENSMALG00000020407rbfox3b10098.093ENSONIG00000009549rbfox3b10098.093Oreochromis_niloticus
ENSMALG00000020407rbfox3b6165.283ENSOCUG00000014217RBFOX37465.660Oryctolagus_cuniculus
ENSMALG00000020407rbfox3b10097.003ENSORLG00000000905rbfox3b7996.164Oryzias_latipes
ENSMALG00000020407rbfox3b10097.003ENSORLG00020018030rbfox3b9996.164Oryzias_latipes_hni
ENSMALG00000020407rbfox3b10097.275ENSORLG00015009200rbfox3b10097.275Oryzias_latipes_hsok
ENSMALG00000020407rbfox3b8191.374ENSOMEG00000014677rbfox3b8689.602Oryzias_melastigma
ENSMALG00000020407rbfox3b8978.659ENSOGAG00000029595RBFOX38780.793Otolemur_garnettii
ENSMALG00000020407rbfox3b8857.790ENSOARG00000002908RBFOX310048.157Ovis_aries
ENSMALG00000020407rbfox3b6980.784ENSPPAG00000025383RBFOX39980.836Pan_paniscus
ENSMALG00000020407rbfox3b8166.765ENSPPRG00000007819RBFOX310071.549Panthera_pardus
ENSMALG00000020407rbfox3b8179.000ENSPTRG00000009727RBFOX310081.847Pan_troglodytes
ENSMALG00000020407rbfox3b8179.000ENSPANG00000019837RBFOX310081.847Papio_anubis
ENSMALG00000020407rbfox3b9071.515ENSPKIG00000022633-9669.359Paramormyrops_kingsleyae
ENSMALG00000020407rbfox3b10087.166ENSPKIG00000010299rbfox3a9987.283Paramormyrops_kingsleyae
ENSMALG00000020407rbfox3b8790.741ENSPMGG00000008000rbfox3b10091.331Periophthalmus_magnuspinnatus
ENSMALG00000020407rbfox3b8166.859ENSPEMG00000010500Rbfox310070.442Peromyscus_maniculatus_bairdii
ENSMALG00000020407rbfox3b9870.443ENSPCIG00000005766RBFOX310076.254Phascolarctos_cinereus
ENSMALG00000020407rbfox3b10098.093ENSPFOG00000018294rbfox3b9698.093Poecilia_formosa
ENSMALG00000020407rbfox3b6594.142ENSPLAG00000000481rbfox3b7294.017Poecilia_latipinna
ENSMALG00000020407rbfox3b8291.946ENSPMEG00000022997rbfox3b10091.946Poecilia_mexicana
ENSMALG00000020407rbfox3b10097.826ENSPREG00000012886rbfox3b9997.826Poecilia_reticulata
ENSMALG00000020407rbfox3b7774.468ENSPPYG00000008704RBFOX38874.247Pongo_abelii
ENSMALG00000020407rbfox3b8164.740ENSPCAG00000001401RBFOX310064.266Procavia_capensis
ENSMALG00000020407rbfox3b8567.867ENSPCOG00000012689RBFOX310070.637Propithecus_coquereli
ENSMALG00000020407rbfox3b8158.501ENSPVAG00000015243RBFOX310062.983Pteropus_vampyrus
ENSMALG00000020407rbfox3b10084.932ENSPNYG00000010414rbfox3b9984.932Pundamilia_nyererei
ENSMALG00000020407rbfox3b10076.712ENSPNYG00000009079-9676.567Pundamilia_nyererei
ENSMALG00000020407rbfox3b10083.024ENSPNAG00000002889rbfox3a10084.615Pygocentrus_nattereri
ENSMALG00000020407rbfox3b8274.333ENSPNAG00000018173rbfox3b9174.000Pygocentrus_nattereri
ENSMALG00000020407rbfox3b8178.405ENSRNOG00000003386Rbfox310081.013Rattus_norvegicus
ENSMALG00000020407rbfox3b9878.889ENSRBIG00000040449RBFOX39980.780Rhinopithecus_bieti
ENSMALG00000020407rbfox3b8179.000ENSRROG00000000766RBFOX310081.847Rhinopithecus_roxellana
ENSMALG00000020407rbfox3b8178.667ENSSBOG00000031591RBFOX310081.529Saimiri_boliviensis_boliviensis
ENSMALG00000020407rbfox3b8973.464ENSSHAG00000016076RBFOX310076.254Sarcophilus_harrisii
ENSMALG00000020407rbfox3b9872.222ENSSFOG00015004716RBFOX39971.229Scleropages_formosus
ENSMALG00000020407rbfox3b10085.561ENSSFOG00015023260rbfox3a10087.166Scleropages_formosus
ENSMALG00000020407rbfox3b10081.199ENSSMAG00000019052-10082.484Scophthalmus_maximus
ENSMALG00000020407rbfox3b10093.490ENSSMAG00000012618rbfox3b8793.490Scophthalmus_maximus
ENSMALG00000020407rbfox3b8291.946ENSSDUG00000023183rbfox3b10091.946Seriola_dumerili
ENSMALG00000020407rbfox3b10076.022ENSSDUG00000015801-9876.839Seriola_dumerili
ENSMALG00000020407rbfox3b10098.093ENSSLDG00000000149rbfox3b10098.093Seriola_lalandi_dorsalis
ENSMALG00000020407rbfox3b10079.292ENSSLDG00000016098-9880.109Seriola_lalandi_dorsalis
ENSMALG00000020407rbfox3b9873.816ENSSPUG00000011733RBFOX39982.428Sphenodon_punctatus
ENSMALG00000020407rbfox3b10089.315ENSSPAG00000017571rbfox3b9989.315Stegastes_partitus
ENSMALG00000020407rbfox3b7476.471ENSSPAG00000004898-8576.655Stegastes_partitus
ENSMALG00000020407rbfox3b7479.779ENSSSCG00000039498RBFOX36991.189Sus_scrofa
ENSMALG00000020407rbfox3b8988.358ENSTRUG00000004894rbfox3b9488.358Takifugu_rubripes
ENSMALG00000020407rbfox3b9086.667ENSTNIG00000011278rbfox3b8987.606Tetraodon_nigroviridis
ENSMALG00000020407rbfox3b5258.974ENSTBEG00000004296-8475.000Tupaia_belangeri
ENSMALG00000020407rbfox3b8161.850ENSTTRG00000003676RBFOX310065.928Tursiops_truncatus
ENSMALG00000020407rbfox3b8179.333ENSUAMG00000004668RBFOX310081.847Ursus_americanus
ENSMALG00000020407rbfox3b9879.167ENSVVUG00000017864RBFOX310081.529Vulpes_vulpes
ENSMALG00000020407rbfox3b8966.092ENSXETG00000020236rbfox38866.282Xenopus_tropicalis
ENSMALG00000020407rbfox3b9896.399ENSXCOG00000018262rbfox3b10096.399Xiphophorus_couchianus
ENSMALG00000020407rbfox3b10098.093ENSXMAG00000012939rbfox3b10098.093Xiphophorus_maculatus

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