EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000020521 (Gene tree)
Gene ID: -
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 10474 bases
Position: chrKV884713.1:1808736-1819209
Accession: 109957223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000029667	zf-CCHC	PF00098.23	0.00039	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000030197	-	1713	XM_020594931	ENSMALP00000029667	570 (aa)	XP_020450587	-

Gene Model

Click here to download ENSMALG00000020521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000020521's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000020521	sf1	92	88.556	ENSAPOG00000012341	sf1	84	86.268	Acanthochromis_polyacanthus
ENSMALG00000020521	sf1	72	95.444	ENSACIG00000016514	sf1	66	95.444	Amphilophus_citrinellus
ENSMALG00000020521	sf1	92	88.556	ENSAOCG00000010934	sf1	84	86.268	Amphiprion_ocellaris
ENSMALG00000020521	sf1	92	88.556	ENSAPEG00000009498	sf1	84	86.268	Amphiprion_percula
ENSMALG00000020521	sf1	92	89.223	ENSATEG00000001894	sf1	84	86.926	Anabas_testudineus
ENSMALG00000020521	sf1	69	78.450	ENSANAG00000026664	-	89	82.888	Aotus_nancymaae
ENSMALG00000020521	sf1	67	70.927	ENSANAG00000022607	-	88	74.725	Aotus_nancymaae
ENSMALG00000020521	sf1	73	93.128	ENSACLG00000007633	sf1	65	93.112	Astatotilapia_calliptera
ENSMALG00000020521	sf1	80	83.573	ENSAMXG00000003630	sf1	74	81.574	Astyanax_mexicanus
ENSMALG00000020521	sf1	68	76.359	ENSBTAG00000001035	SF1	62	82.888	Bos_taurus
ENSMALG00000020521	sf1	68	76.611	ENSCJAG00000002780	SF1	58	82.888	Callithrix_jacchus
ENSMALG00000020521	sf1	68	76.359	ENSCHIG00000025867	SF1	68	82.888	Capra_hircus
ENSMALG00000020521	sf1	67	76.812	ENSCAPG00000010762	SF1	65	84.110	Cavia_aperea
ENSMALG00000020521	sf1	68	76.485	ENSCPOG00000012290	SF1	68	84.110	Cavia_porcellus
ENSMALG00000020521	sf1	68	78.818	ENSCCAG00000037881	SF1	89	82.888	Cebus_capucinus
ENSMALG00000020521	sf1	68	70.803	ENSCCAG00000023781	-	83	73.387	Cebus_capucinus
ENSMALG00000020521	sf1	68	76.359	ENSCATG00000011564	SF1	89	82.888	Cercocebus_atys
ENSMALG00000020521	sf1	68	76.359	ENSCSAG00000007258	SF1	68	82.888	Chlorocebus_sabaeus
ENSMALG00000020521	sf1	64	71.930	ENSCHOG00000006008	SF1	66	78.286	Choloepus_hoffmanni
ENSMALG00000020521	sf1	64	54.589	ENSCING00000005564	-	92	53.813	Ciona_intestinalis
ENSMALG00000020521	sf1	81	53.119	ENSCSAVG00000009055	-	72	61.130	Ciona_savignyi
ENSMALG00000020521	sf1	63	79.328	ENSCANG00000042201	SF1	89	82.888	Colobus_angolensis_palliatus
ENSMALG00000020521	sf1	68	76.596	ENSCGRG00001003677	Sf1	65	83.422	Cricetulus_griseus_chok1gshd
ENSMALG00000020521	sf1	67	77.053	ENSCGRG00000001708	Sf1	68	83.198	Cricetulus_griseus_crigri
ENSMALG00000020521	sf1	77	84.823	ENSCSEG00000014375	sf1	65	85.430	Cynoglossus_semilaevis
ENSMALG00000020521	sf1	72	84.868	ENSCVAG00000001670	sf1	67	84.868	Cyprinodon_variegatus
ENSMALG00000020521	sf1	75	79.872	ENSDARG00000008188	sf1	65	89.730	Danio_rerio
ENSMALG00000020521	sf1	68	76.359	ENSDNOG00000001282	SF1	68	83.422	Dasypus_novemcinctus
ENSMALG00000020521	sf1	68	76.066	ENSDORG00000016334	Sf1	58	82.888	Dipodomys_ordii
ENSMALG00000020521	sf1	67	72.277	ENSETEG00000012830	SF1	51	75.068	Echinops_telfairi
ENSMALG00000020521	sf1	89	50.086	ENSEBUG00000012728	sf1	61	55.702	Eptatretus_burgeri
ENSMALG00000020521	sf1	68	76.359	ENSEASG00005018272	SF1	68	82.888	Equus_asinus_asinus
ENSMALG00000020521	sf1	68	76.359	ENSECAG00000024544	SF1	68	82.888	Equus_caballus
ENSMALG00000020521	sf1	60	78.904	ENSEEUG00000001058	SF1	83	84.923	Erinaceus_europaeus
ENSMALG00000020521	sf1	77	78.528	ENSELUG00000013225	sf1	60	81.046	Esox_lucius
ENSMALG00000020521	sf1	68	76.611	ENSFCAG00000012231	SF1	58	82.888	Felis_catus
ENSMALG00000020521	sf1	67	76.812	ENSFDAG00000009833	SF1	65	83.562	Fukomys_damarensis
ENSMALG00000020521	sf1	73	84.176	ENSFHEG00000022656	sf1	67	84.141	Fundulus_heteroclitus
ENSMALG00000020521	sf1	82	75.876	ENSGMOG00000007469	sf1	61	90.801	Gadus_morhua
ENSMALG00000020521	sf1	92	84.886	ENSGAFG00000019284	sf1	69	90.934	Gambusia_affinis
ENSMALG00000020521	sf1	64	88.947	ENSGACG00000000826	sf1	64	89.276	Gasterosteus_aculeatus
ENSMALG00000020521	sf1	71	82.254	ENSGAGG00000021691	SF1	52	84.384	Gopherus_agassizii
ENSMALG00000020521	sf1	73	86.433	ENSHBUG00000011598	sf1	67	86.404	Haplochromis_burtoni
ENSMALG00000020521	sf1	68	76.359	ENSHGLG00000009541	SF1	65	82.888	Heterocephalus_glaber_female
ENSMALG00000020521	sf1	67	76.812	ENSHGLG00100013879	-	64	84.593	Heterocephalus_glaber_male
ENSMALG00000020521	sf1	63	74.599	ENSHGLG00100008076	-	66	81.703	Heterocephalus_glaber_male
ENSMALG00000020521	sf1	75	83.120	ENSHCOG00000011388	sf1	67	84.071	Hippocampus_comes
ENSMALG00000020521	sf1	62	72.678	ENSSTOG00000024353	-	66	74.185	Ictidomys_tridecemlineatus
ENSMALG00000020521	sf1	92	85.915	ENSKMAG00000005854	sf1	87	83.803	Kryptolebias_marmoratus
ENSMALG00000020521	sf1	70	93.431	ENSLBEG00000019836	sf1	64	93.431	Labrus_bergylta
ENSMALG00000020521	sf1	68	77.094	ENSLACG00000018493	SF1	67	78.862	Latimeria_chalumnae
ENSMALG00000020521	sf1	72	74.732	ENSLOCG00000002130	sf1	72	78.112	Lepisosteus_oculatus
ENSMALG00000020521	sf1	68	77.143	ENSLAFG00000007201	SF1	63	81.266	Loxodonta_africana
ENSMALG00000020521	sf1	68	76.359	ENSMFAG00000033122	SF1	89	82.888	Macaca_fascicularis
ENSMALG00000020521	sf1	68	76.611	ENSMMUG00000022606	SF1	90	83.243	Macaca_mulatta
ENSMALG00000020521	sf1	68	76.611	ENSMNEG00000037901	SF1	89	82.888	Macaca_nemestrina
ENSMALG00000020521	sf1	67	76.812	ENSMLEG00000040706	SF1	90	81.698	Mandrillus_leucophaeus
ENSMALG00000020521	sf1	92	89.279	ENSMAMG00000001780	sf1	84	86.995	Mastacembelus_armatus
ENSMALG00000020521	sf1	73	86.433	ENSMZEG00005009196	sf1	67	86.404	Maylandia_zebra
ENSMALG00000020521	sf1	68	76.596	ENSMAUG00000014064	Sf1	65	83.422	Mesocricetus_auratus
ENSMALG00000020521	sf1	69	75.887	ENSMICG00000001202	SF1	89	82.667	Microcebus_murinus
ENSMALG00000020521	sf1	68	76.596	ENSMOCG00000022038	Sf1	65	83.422	Microtus_ochrogaster
ENSMALG00000020521	sf1	72	90.323	ENSMMOG00000020474	sf1	66	90.323	Mola_mola
ENSMALG00000020521	sf1	68	78.537	ENSMODG00000029407	SF1	80	83.243	Monodelphis_domestica
ENSMALG00000020521	sf1	68	76.596	MGP_CAROLIEiJ_G0022607	Sf1	99	93.233	Mus_caroli
ENSMALG00000020521	sf1	68	76.596	ENSMUSG00000024949	Sf1	99	93.233	Mus_musculus
ENSMALG00000020521	sf1	68	76.596	MGP_PahariEiJ_G0014101	Sf1	99	93.233	Mus_pahari
ENSMALG00000020521	sf1	68	76.596	MGP_SPRETEiJ_G0023518	Sf1	99	93.233	Mus_spretus
ENSMALG00000020521	sf1	74	73.510	ENSMLUG00000029800	-	64	79.893	Myotis_lucifugus
ENSMALG00000020521	sf1	68	76.777	ENSMLUG00000015217	-	58	83.646	Myotis_lucifugus
ENSMALG00000020521	sf1	68	76.596	ENSNGAG00000005550	Sf1	65	83.155	Nannospalax_galili
ENSMALG00000020521	sf1	73	93.128	ENSNBRG00000017606	sf1	65	93.112	Neolamprologus_brichardi
ENSMALG00000020521	sf1	68	78.365	ENSNLEG00000005236	-	89	82.888	Nomascus_leucogenys
ENSMALG00000020521	sf1	66	78.803	ENSMEUG00000013424	SF1	68	83.978	Notamacropus_eugenii
ENSMALG00000020521	sf1	60	78.297	ENSOPRG00000005008	SF1	66	84.308	Ochotona_princeps
ENSMALG00000020521	sf1	73	86.214	ENSONIG00000015728	sf1	67	86.184	Oreochromis_niloticus
ENSMALG00000020521	sf1	56	76.786	ENSOANG00000002909	SF1	75	79.801	Ornithorhynchus_anatinus
ENSMALG00000020521	sf1	75	82.441	ENSORLG00000011853	sf1	66	83.814	Oryzias_latipes
ENSMALG00000020521	sf1	75	82.655	ENSORLG00020011834	sf1	66	84.035	Oryzias_latipes_hni
ENSMALG00000020521	sf1	73	82.637	ENSORLG00015012855	sf1	66	83.370	Oryzias_latipes_hsok
ENSMALG00000020521	sf1	92	85.816	ENSOMEG00000005210	sf1	84	83.865	Oryzias_melastigma
ENSMALG00000020521	sf1	68	76.359	ENSOARG00000009166	SF1	65	82.888	Ovis_aries
ENSMALG00000020521	sf1	69	76.066	ENSPPAG00000002799	-	91	82.620	Pan_paniscus
ENSMALG00000020521	sf1	68	76.611	ENSPPRG00000013566	SF1	57	84.659	Panthera_pardus
ENSMALG00000020521	sf1	69	75.644	ENSPTIG00000016141	SF1	68	82.011	Panthera_tigris_altaica
ENSMALG00000020521	sf1	70	76.566	ENSPTRG00000003846	SF1	89	82.888	Pan_troglodytes
ENSMALG00000020521	sf1	68	76.359	ENSPANG00000020754	SF1	89	82.888	Papio_anubis
ENSMALG00000020521	sf1	55	81.325	ENSPKIG00000012116	sf1	78	81.908	Paramormyrops_kingsleyae
ENSMALG00000020521	sf1	52	81.672	ENSPSIG00000003610	SF1	52	84.556	Pelodiscus_sinensis
ENSMALG00000020521	sf1	68	76.596	ENSPEMG00000010463	Sf1	65	83.422	Peromyscus_maniculatus_bairdii
ENSMALG00000020521	sf1	66	62.162	ENSPMAG00000008272	sf1	58	62.654	Petromyzon_marinus
ENSMALG00000020521	sf1	68	78.345	ENSPCIG00000018173	SF1	60	83.155	Phascolarctos_cinereus
ENSMALG00000020521	sf1	72	84.649	ENSPFOG00000013683	sf1	61	93.407	Poecilia_formosa
ENSMALG00000020521	sf1	84	88.710	ENSPLAG00000018076	sf1	56	91.599	Poecilia_latipinna
ENSMALG00000020521	sf1	72	84.649	ENSPMEG00000005726	sf1	67	84.649	Poecilia_mexicana
ENSMALG00000020521	sf1	72	84.430	ENSPREG00000004155	sf1	67	84.430	Poecilia_reticulata
ENSMALG00000020521	sf1	68	76.359	ENSPPYG00000003098	-	71	82.888	Pongo_abelii
ENSMALG00000020521	sf1	68	78.155	ENSPCAG00000013631	SF1	55	83.243	Procavia_capensis
ENSMALG00000020521	sf1	69	75.887	ENSPCOG00000027546	SF1	89	82.667	Propithecus_coquereli
ENSMALG00000020521	sf1	68	76.611	ENSPVAG00000016938	SF1	55	83.784	Pteropus_vampyrus
ENSMALG00000020521	sf1	73	86.433	ENSPNYG00000004673	sf1	67	86.404	Pundamilia_nyererei
ENSMALG00000020521	sf1	80	82.857	ENSPNAG00000013072	sf1	84	80.927	Pygocentrus_nattereri
ENSMALG00000020521	sf1	58	74.373	ENSRNOG00000021085	Sf1	60	84.333	Rattus_norvegicus
ENSMALG00000020521	sf1	68	76.359	ENSRBIG00000042818	SF1	89	82.888	Rhinopithecus_bieti
ENSMALG00000020521	sf1	68	76.611	ENSRROG00000045655	SF1	90	81.698	Rhinopithecus_roxellana
ENSMALG00000020521	sf1	50	40.594	YLR116W	MSL5	58	41.812	Saccharomyces_cerevisiae
ENSMALG00000020521	sf1	72	65.904	ENSSBOG00000022267	-	88	68.800	Saimiri_boliviensis_boliviensis
ENSMALG00000020521	sf1	82	70.143	ENSSHAG00000006841	SF1	69	82.749	Sarcophilus_harrisii
ENSMALG00000020521	sf1	77	76.778	ENSSFOG00015021978	sf1	66	77.042	Scleropages_formosus
ENSMALG00000020521	sf1	92	84.828	ENSSMAG00000007549	sf1	70	84.934	Scophthalmus_maximus
ENSMALG00000020521	sf1	92	88.772	ENSSDUG00000003903	sf1	87	86.491	Seriola_dumerili
ENSMALG00000020521	sf1	92	89.123	ENSSLDG00000013075	sf1	84	86.842	Seriola_lalandi_dorsalis
ENSMALG00000020521	sf1	67	72.330	ENSSARG00000008180	SF1	71	78.512	Sorex_araneus
ENSMALG00000020521	sf1	67	79.572	ENSSPUG00000012907	SF1	58	86.416	Sphenodon_punctatus
ENSMALG00000020521	sf1	92	88.028	ENSSPAG00000019060	sf1	84	85.915	Stegastes_partitus
ENSMALG00000020521	sf1	68	76.596	ENSSSCG00000013021	SF1	68	83.422	Sus_scrofa
ENSMALG00000020521	sf1	82	71.456	ENSTNIG00000004820	sf1	73	77.604	Tetraodon_nigroviridis
ENSMALG00000020521	sf1	69	70.433	ENSTBEG00000013133	SF1	62	69.746	Tupaia_belangeri
ENSMALG00000020521	sf1	67	71.913	ENSTTRG00000008857	SF1	67	78.297	Tursiops_truncatus
ENSMALG00000020521	sf1	69	76.179	ENSUMAG00000007268	SF1	71	82.842	Ursus_maritimus
ENSMALG00000020521	sf1	68	76.359	ENSVVUG00000028585	SF1	68	82.888	Vulpes_vulpes
ENSMALG00000020521	sf1	89	67.784	ENSXETG00000008434	sf1	62	84.958	Xenopus_tropicalis
ENSMALG00000020521	sf1	61	93.539	ENSXCOG00000003704	sf1	69	93.521	Xiphophorus_couchianus
ENSMALG00000020521	sf1	73	84.902	ENSXMAG00000007822	sf1	70	84.868	Xiphophorus_maculatus