EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000020557 (Gene tree)
Gene ID: 109957237
Gene Symbol: -
Alias: rbm4l|wu:fc25a01
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 1539 bases
Position: chrKV884713.1:1830287-1831825
Accession: 109957237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000029707	RRM_5	PF13893.6	8.4e-09	1	1
ENSMALP00000029707	RRM_1	PF00076.22	2.2e-30	1	2
ENSMALP00000029707	RRM_1	PF00076.22	2.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000030237	-	1146	XM_020594961	ENSMALP00000029707	381 (aa)	XP_020450617	UPI0009B32DEB

Gene Model

Click here to download ENSMALG00000020557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000020557's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000020557	-	90	41.691	ENSMALG00000003001	rbm4.3	87	43.895
ENSMALG00000020557	-	94	40.984	ENSMALG00000015014	-	91	41.530
ENSMALG00000020557	-	93	37.950	ENSMALG00000003032	rbm4.3	93	40.443
ENSMALG00000020557	-	98	51.537	ENSMALG00000020544	rbm4.1	98	52.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000020557	-	94	50.365	ENSAPOG00000012353	rbm4.1	95	52.357	Acanthochromis_polyacanthus
ENSMALG00000020557	-	98	48.936	ENSACIG00000016482	rbm4.1	98	49.192	Amphilophus_citrinellus
ENSMALG00000020557	-	94	50.728	ENSAOCG00000010915	rbm4.1	95	52.605	Amphiprion_ocellaris
ENSMALG00000020557	-	94	50.728	ENSAPEG00000009494	rbm4.1	95	52.605	Amphiprion_percula
ENSMALG00000020557	-	98	49.644	ENSATEG00000001904	rbm4.1	98	51.807	Anabas_testudineus
ENSMALG00000020557	-	100	77.865	ENSACLG00000007740	-	100	77.083	Astatotilapia_calliptera
ENSMALG00000020557	-	98	48.936	ENSACLG00000007722	rbm4.1	98	49.423	Astatotilapia_calliptera
ENSMALG00000020557	-	99	53.250	ENSAMXG00000036611	rbm4.1	99	52.911	Astyanax_mexicanus
ENSMALG00000020557	-	99	49.644	ENSCSEG00000014365	rbm4.1	99	49.881	Cynoglossus_semilaevis
ENSMALG00000020557	-	100	74.872	ENSCSEG00000014359	-	100	75.128	Cynoglossus_semilaevis
ENSMALG00000020557	-	94	49.510	ENSCVAG00000019349	rbm4.1	95	50.500	Cyprinodon_variegatus
ENSMALG00000020557	-	99	49.541	ENSDARG00000036386	rbm4.1	79	71.014	Danio_rerio
ENSMALG00000020557	-	99	52.736	ENSDARG00000055080	rbm4.2	99	55.867	Danio_rerio
ENSMALG00000020557	-	50	56.186	ENSEBUG00000007174	-	97	56.322	Eptatretus_burgeri
ENSMALG00000020557	-	99	48.292	ENSELUG00000013205	rbm4.1	99	49.769	Esox_lucius
ENSMALG00000020557	-	94	52.381	ENSFHEG00000022926	rbm4.1	95	50.995	Fundulus_heteroclitus
ENSMALG00000020557	-	100	70.361	ENSGMOG00000007455	-	100	72.751	Gadus_morhua
ENSMALG00000020557	-	94	52.500	ENSGAFG00000019302	rbm4.1	94	52.500	Gambusia_affinis
ENSMALG00000020557	-	100	78.010	ENSGACG00000000821	-	100	79.581	Gasterosteus_aculeatus
ENSMALG00000020557	-	94	51.374	ENSGACG00000000822	rbm4.1	94	51.923	Gasterosteus_aculeatus
ENSMALG00000020557	-	98	48.936	ENSHBUG00000011610	rbm4.1	98	49.423	Haplochromis_burtoni
ENSMALG00000020557	-	96	47.236	ENSHCOG00000011403	rbm4.1	99	47.236	Hippocampus_comes
ENSMALG00000020557	-	93	54.178	ENSIPUG00000022937	rbm4.2	97	52.468	Ictalurus_punctatus
ENSMALG00000020557	-	99	50.701	ENSIPUG00000022931	rbm4.1	99	49.767	Ictalurus_punctatus
ENSMALG00000020557	-	100	61.614	ENSKMAG00000006528	-	100	63.814	Kryptolebias_marmoratus
ENSMALG00000020557	-	95	50.000	ENSKMAG00000006556	rbm4.1	95	49.750	Kryptolebias_marmoratus
ENSMALG00000020557	-	99	49.409	ENSLBEG00000019782	rbm4.1	99	47.072	Labrus_bergylta
ENSMALG00000020557	-	100	81.558	ENSLBEG00000019756	-	100	82.078	Labrus_bergylta
ENSMALG00000020557	-	100	84.974	ENSMAMG00000001760	-	100	86.269	Mastacembelus_armatus
ENSMALG00000020557	-	98	49.292	ENSMAMG00000001765	rbm4.1	98	51.807	Mastacembelus_armatus
ENSMALG00000020557	-	54	71.770	ENSMZEG00005028158	-	68	70.335	Maylandia_zebra
ENSMALG00000020557	-	98	48.936	ENSMZEG00005009205	rbm4.1	98	49.423	Maylandia_zebra
ENSMALG00000020557	-	98	50.600	ENSMMOG00000020479	rbm4.1	98	48.276	Mola_mola
ENSMALG00000020557	-	98	48.936	ENSNBRG00000017755	rbm4.1	98	49.423	Neolamprologus_brichardi
ENSMALG00000020557	-	98	48.936	ENSONIG00000015730	rbm4.1	98	49.423	Oreochromis_niloticus
ENSMALG00000020557	-	96	49.377	ENSORLG00000012496	rbm4.1	96	50.123	Oryzias_latipes
ENSMALG00000020557	-	96	49.377	ENSORLG00020012454	rbm4.1	96	50.123	Oryzias_latipes_hni
ENSMALG00000020557	-	96	49.377	ENSORLG00015013678	rbm4.1	96	50.123	Oryzias_latipes_hsok
ENSMALG00000020557	-	96	50.370	ENSOMEG00000001001	rbm4.1	96	49.389	Oryzias_melastigma
ENSMALG00000020557	-	98	49.880	ENSPKIG00000020805	rbm4.1	85	71.739	Paramormyrops_kingsleyae
ENSMALG00000020557	-	100	69.898	ENSPFOG00000012685	-	100	69.898	Poecilia_formosa
ENSMALG00000020557	-	94	52.750	ENSPFOG00000012675	rbm4.1	94	52.750	Poecilia_formosa
ENSMALG00000020557	-	94	52.750	ENSPLAG00000018572	rbm4.1	94	52.750	Poecilia_latipinna
ENSMALG00000020557	-	94	52.750	ENSPMEG00000006290	rbm4.1	94	52.750	Poecilia_mexicana
ENSMALG00000020557	-	94	52.750	ENSPREG00000003724	rbm4.1	94	52.750	Poecilia_reticulata
ENSMALG00000020557	-	100	65.810	ENSPREG00000003764	-	100	65.810	Poecilia_reticulata
ENSMALG00000020557	-	98	48.936	ENSPNYG00000004662	rbm4.1	98	49.423	Pundamilia_nyererei
ENSMALG00000020557	-	99	53.511	ENSPNAG00000002539	rbm4.1	99	52.415	Pygocentrus_nattereri
ENSMALG00000020557	-	99	53.418	ENSPNAG00000013057	rbm4.2	99	52.750	Pygocentrus_nattereri
ENSMALG00000020557	-	98	50.481	ENSSFOG00015021996	sf1	98	47.706	Scleropages_formosus
ENSMALG00000020557	-	98	49.758	ENSSMAG00000007571	rbm4.1	98	49.268	Scophthalmus_maximus
ENSMALG00000020557	-	100	88.601	ENSSDUG00000003936	-	100	88.601	Seriola_dumerili
ENSMALG00000020557	-	98	48.931	ENSSDUG00000003925	rbm4.1	98	48.736	Seriola_dumerili
ENSMALG00000020557	-	100	85.492	ENSSLDG00000013157	-	100	87.565	Seriola_lalandi_dorsalis
ENSMALG00000020557	-	98	48.931	ENSSLDG00000013147	rbm4.1	98	48.736	Seriola_lalandi_dorsalis
ENSMALG00000020557	-	100	82.507	ENSSPAG00000019046	-	100	82.507	Stegastes_partitus
ENSMALG00000020557	-	98	48.592	ENSSPAG00000019053	rbm4.1	98	51.559	Stegastes_partitus
ENSMALG00000020557	-	100	74.413	ENSTRUG00000013328	-	100	73.298	Takifugu_rubripes
ENSMALG00000020557	-	98	49.880	ENSTRUG00000013334	rbm4.1	98	49.398	Takifugu_rubripes
ENSMALG00000020557	-	100	74.674	ENSTNIG00000000316	-	100	73.560	Tetraodon_nigroviridis
ENSMALG00000020557	-	94	48.209	ENSTNIG00000004821	rbm4.1	58	68.063	Tetraodon_nigroviridis
ENSMALG00000020557	-	84	46.082	ENSXETG00000026649	rbm4b	94	46.175	Xenopus_tropicalis
ENSMALG00000020557	-	94	53.000	ENSXCOG00000003731	rbm4.1	95	52.357	Xiphophorus_couchianus
ENSMALG00000020557	-	100	69.054	ENSXMAG00000008059	-	100	69.309	Xiphophorus_maculatus
ENSMALG00000020557	-	94	53.000	ENSXMAG00000008069	rbm4.1	94	52.750	Xiphophorus_maculatus