EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000020688 (Gene tree)
Gene ID: 109972175
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 31196 bases
Position: chrKV884938.1:618442-649637
Accession: 109972175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000029887	Surp	PF01805.20	3.8e-16	1	1
ENSMALP00000029908	Surp	PF01805.20	1e-15	1	1
ENSMALP00000029908	G-patch	PF01585.23	1.6e-10	1	1
ENSMALP00000029887	G-patch	PF01585.23	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000030439	-	4319	XM_020620875	ENSMALP00000029908	926 (aa)	XP_020476531	UPI0009B48A67
ENSMALT00000030417	-	4474	-	ENSMALP00000029887	944 (aa)	-	-

Gene Model

Click here to download ENSMALG00000020688's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000020688's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000020688	cherp	79	66.102	ENSG00000085872	CHERP	99	65.217	Homo_sapiens
ENSMALG00000020688	cherp	78	67.746	ENSAMEG00000010048	CHERP	79	67.075	Ailuropoda_melanoleuca
ENSMALG00000020688	cherp	100	86.084	ENSACIG00000019242	cherp	80	90.548	Amphilophus_citrinellus
ENSMALG00000020688	cherp	100	88.470	ENSAOCG00000017846	cherp	100	88.362	Amphiprion_ocellaris
ENSMALG00000020688	cherp	100	89.536	ENSAPEG00000021128	cherp	100	88.781	Amphiprion_percula
ENSMALG00000020688	cherp	100	89.247	ENSATEG00000006341	cherp	99	89.032	Anabas_testudineus
ENSMALG00000020688	cherp	76	67.080	ENSAPLG00000010773	CHERP	99	65.279	Anas_platyrhynchos
ENSMALG00000020688	cherp	79	65.296	ENSANAG00000024284	CHERP	80	66.229	Aotus_nancymaae
ENSMALG00000020688	cherp	100	89.644	ENSACLG00000020053	cherp	100	88.889	Astatotilapia_calliptera
ENSMALG00000020688	cherp	79	72.715	ENSAMXG00000021637	cherp	94	69.958	Astyanax_mexicanus
ENSMALG00000020688	cherp	99	63.836	ENSBTAG00000005289	CHERP	82	67.156	Bos_taurus
ENSMALG00000020688	cherp	79	65.296	ENSCJAG00000040462	CHERP	82	64.499	Callithrix_jacchus
ENSMALG00000020688	cherp	79	66.449	ENSCAFG00000015671	CHERP	98	65.608	Canis_familiaris
ENSMALG00000020688	cherp	84	87.500	ENSCAFG00020009941	CHERP	80	67.237	Canis_lupus_dingo
ENSMALG00000020688	cherp	87	80.000	ENSCHIG00000013765	CHERP	94	89.873	Capra_hircus
ENSMALG00000020688	cherp	88	59.674	ENSCAPG00000000910	CHERP	68	66.667	Cavia_aperea
ENSMALG00000020688	cherp	79	65.071	ENSCPOG00000019949	CHERP	99	65.021	Cavia_porcellus
ENSMALG00000020688	cherp	79	65.424	ENSCCAG00000031534	CHERP	80	66.053	Cebus_capucinus
ENSMALG00000020688	cherp	79	64.827	ENSCATG00000031409	CHERP	99	64.398	Cercocebus_atys
ENSMALG00000020688	cherp	67	64.962	ENSCLAG00000005484	CHERP	73	64.955	Chinchilla_lanigera
ENSMALG00000020688	cherp	79	65.971	ENSCSAG00000005740	CHERP	99	65.323	Chlorocebus_sabaeus
ENSMALG00000020688	cherp	79	67.380	ENSCPBG00000014970	CHERP	80	67.388	Chrysemys_picta_bellii
ENSMALG00000020688	cherp	68	48.421	ENSCING00000004814	-	53	76.923	Ciona_intestinalis
ENSMALG00000020688	cherp	53	49.451	ENSCSAVG00000002455	-	50	77.778	Ciona_savignyi
ENSMALG00000020688	cherp	79	66.016	ENSCANG00000032053	CHERP	99	65.217	Colobus_angolensis_palliatus
ENSMALG00000020688	cherp	79	64.796	ENSCGRG00001023316	Cherp	99	66.105	Cricetulus_griseus_chok1gshd
ENSMALG00000020688	cherp	78	65.971	ENSCGRG00000015901	Cherp	99	66.238	Cricetulus_griseus_crigri
ENSMALG00000020688	cherp	79	85.445	ENSCSEG00000019700	cherp	100	84.199	Cynoglossus_semilaevis
ENSMALG00000020688	cherp	76	81.740	ENSCVAG00000003622	cherp	93	82.558	Cyprinodon_variegatus
ENSMALG00000020688	cherp	100	72.026	ENSDARG00000021812	cherp	100	77.432	Danio_rerio
ENSMALG00000020688	cherp	98	63.627	ENSDORG00000027623	Cherp	80	66.040	Dipodomys_ordii
ENSMALG00000020688	cherp	77	78.351	ENSETEG00000019543	CHERP	80	74.554	Echinops_telfairi
ENSMALG00000020688	cherp	79	66.275	ENSEASG00005000428	CHERP	73	67.290	Equus_asinus_asinus
ENSMALG00000020688	cherp	79	66.188	ENSECAG00000012713	CHERP	80	67.467	Equus_caballus
ENSMALG00000020688	cherp	99	75.784	ENSELUG00000023026	cherp	80	77.317	Esox_lucius
ENSMALG00000020688	cherp	79	65.340	ENSFCAG00000013172	CHERP	80	67.192	Felis_catus
ENSMALG00000020688	cherp	79	67.862	ENSFALG00000013410	CHERP	86	66.308	Ficedula_albicollis
ENSMALG00000020688	cherp	91	96.491	ENSFHEG00000009720	cherp	77	96.491	Fundulus_heteroclitus
ENSMALG00000020688	cherp	98	79.912	ENSGMOG00000008654	cherp	99	80.044	Gadus_morhua
ENSMALG00000020688	cherp	79	67.914	ENSGALG00000003824	CHERP	88	66.595	Gallus_gallus
ENSMALG00000020688	cherp	99	83.459	ENSGACG00000002053	cherp	99	81.955	Gasterosteus_aculeatus
ENSMALG00000020688	cherp	79	67.158	ENSGAGG00000014208	CHERP	80	67.253	Gopherus_agassizii
ENSMALG00000020688	cherp	67	54.230	ENSGGOG00000016348	CHERP	95	57.619	Gorilla_gorilla
ENSMALG00000020688	cherp	100	90.076	ENSHBUG00000007405	cherp	100	89.320	Haplochromis_burtoni
ENSMALG00000020688	cherp	79	67.503	ENSHGLG00000002993	CHERP	99	66.416	Heterocephalus_glaber_female
ENSMALG00000020688	cherp	79	81.461	ENSHCOG00000007691	cherp	100	78.701	Hippocampus_comes
ENSMALG00000020688	cherp	79	74.697	ENSIPUG00000025008	cherp	100	70.224	Ictalurus_punctatus
ENSMALG00000020688	cherp	78	66.667	ENSSTOG00000012089	CHERP	79	67.751	Ictidomys_tridecemlineatus
ENSMALG00000020688	cherp	79	67.942	ENSJJAG00000017982	Cherp	81	66.402	Jaculus_jaculus
ENSMALG00000020688	cherp	79	84.332	ENSKMAG00000009101	cherp	99	84.879	Kryptolebias_marmoratus
ENSMALG00000020688	cherp	78	85.517	ENSLBEG00000007586	cherp	91	87.500	Labrus_bergylta
ENSMALG00000020688	cherp	79	66.924	ENSLACG00000018221	CHERP	98	65.083	Latimeria_chalumnae
ENSMALG00000020688	cherp	100	74.015	ENSLOCG00000003654	cherp	100	71.444	Lepisosteus_oculatus
ENSMALG00000020688	cherp	79	65.969	ENSLAFG00000009096	CHERP	100	67.641	Loxodonta_africana
ENSMALG00000020688	cherp	79	64.910	ENSMFAG00000033267	CHERP	99	64.465	Macaca_fascicularis
ENSMALG00000020688	cherp	99	62.500	ENSMMUG00000012958	CHERP	82	65.921	Macaca_mulatta
ENSMALG00000020688	cherp	79	64.910	ENSMNEG00000004125	CHERP	99	64.465	Macaca_nemestrina
ENSMALG00000020688	cherp	70	82.353	ENSMLEG00000044337	CHERP	77	74.157	Mandrillus_leucophaeus
ENSMALG00000020688	cherp	100	92.233	ENSMAMG00000022269	cherp	100	91.802	Mastacembelus_armatus
ENSMALG00000020688	cherp	100	89.752	ENSMZEG00005018014	cherp	100	88.997	Maylandia_zebra
ENSMALG00000020688	cherp	67	70.440	ENSMGAG00000005571	CHERP	93	67.235	Meleagris_gallopavo
ENSMALG00000020688	cherp	79	65.116	ENSMAUG00000015856	Cherp	99	65.928	Mesocricetus_auratus
ENSMALG00000020688	cherp	79	66.016	ENSMICG00000004577	CHERP	99	64.905	Microcebus_murinus
ENSMALG00000020688	cherp	79	65.759	ENSMOCG00000014697	Cherp	99	66.346	Microtus_ochrogaster
ENSMALG00000020688	cherp	99	85.622	ENSMMOG00000008525	cherp	77	88.531	Mola_mola
ENSMALG00000020688	cherp	79	65.122	MGP_CAROLIEiJ_G0031220	Cherp	99	65.748	Mus_caroli
ENSMALG00000020688	cherp	79	64.396	ENSMUSG00000052488	Cherp	99	65.360	Mus_musculus
ENSMALG00000020688	cherp	79	64.935	MGP_PahariEiJ_G0021685	Cherp	99	65.919	Mus_pahari
ENSMALG00000020688	cherp	79	66.405	MGP_SPRETEiJ_G0032341	Cherp	99	65.781	Mus_spretus
ENSMALG00000020688	cherp	79	65.841	ENSMPUG00000016023	CHERP	77	67.643	Mustela_putorius_furo
ENSMALG00000020688	cherp	79	61.169	ENSMLUG00000013881	CHERP	80	62.766	Myotis_lucifugus
ENSMALG00000020688	cherp	79	64.249	ENSNGAG00000023323	Cherp	99	66.597	Nannospalax_galili
ENSMALG00000020688	cherp	100	84.466	ENSNBRG00000001914	cherp	81	88.049	Neolamprologus_brichardi
ENSMALG00000020688	cherp	79	65.971	ENSNLEG00000005536	CHERP	99	65.250	Nomascus_leucogenys
ENSMALG00000020688	cherp	64	76.667	ENSMEUG00000010840	CHERP	89	78.082	Notamacropus_eugenii
ENSMALG00000020688	cherp	78	66.798	ENSODEG00000001528	CHERP	81	66.309	Octodon_degus
ENSMALG00000020688	cherp	100	89.968	ENSONIG00000007686	cherp	100	89.213	Oreochromis_niloticus
ENSMALG00000020688	cherp	100	82.848	ENSORLG00000000138	cherp	100	82.524	Oryzias_latipes
ENSMALG00000020688	cherp	100	83.387	ENSORLG00020013142	cherp	100	82.309	Oryzias_latipes_hni
ENSMALG00000020688	cherp	79	84.354	ENSORLG00015008911	cherp	100	82.201	Oryzias_latipes_hsok
ENSMALG00000020688	cherp	79	85.442	ENSOMEG00000016947	cherp	99	83.721	Oryzias_melastigma
ENSMALG00000020688	cherp	79	65.450	ENSOGAG00000005834	CHERP	79	66.088	Otolemur_garnettii
ENSMALG00000020688	cherp	79	58.716	ENSOARG00000018876	CHERP	78	60.107	Ovis_aries
ENSMALG00000020688	cherp	79	64.955	ENSPPAG00000029195	CHERP	80	66.010	Pan_paniscus
ENSMALG00000020688	cherp	79	65.340	ENSPPRG00000003275	CHERP	80	67.192	Panthera_pardus
ENSMALG00000020688	cherp	98	54.811	ENSPTIG00000019778	CHERP	99	53.804	Panthera_tigris_altaica
ENSMALG00000020688	cherp	79	66.016	ENSPTRG00000010647	CHERP	99	65.148	Pan_troglodytes
ENSMALG00000020688	cherp	79	64.910	ENSPANG00000011698	CHERP	99	64.465	Papio_anubis
ENSMALG00000020688	cherp	77	65.934	ENSPKIG00000000423	cherp	79	68.313	Paramormyrops_kingsleyae
ENSMALG00000020688	cherp	78	68.133	ENSPSIG00000011974	CHERP	79	67.480	Pelodiscus_sinensis
ENSMALG00000020688	cherp	98	70.362	ENSPMGG00000023606	cherp	79	76.554	Periophthalmus_magnuspinnatus
ENSMALG00000020688	cherp	79	64.086	ENSPEMG00000011238	Cherp	99	65.723	Peromyscus_maniculatus_bairdii
ENSMALG00000020688	cherp	99	82.845	ENSPFOG00000016899	cherp	100	83.656	Poecilia_formosa
ENSMALG00000020688	cherp	84	82.481	ENSPMEG00000002214	cherp	76	85.128	Poecilia_mexicana
ENSMALG00000020688	cherp	99	83.043	ENSPREG00000020774	cherp	99	83.903	Poecilia_reticulata
ENSMALG00000020688	cherp	79	66.712	ENSPPYG00000009691	CHERP	79	65.545	Pongo_abelii
ENSMALG00000020688	cherp	87	87.500	ENSPCAG00000001337	CHERP	89	88.608	Procavia_capensis
ENSMALG00000020688	cherp	87	87.500	ENSPVAG00000004320	CHERP	89	88.608	Pteropus_vampyrus
ENSMALG00000020688	cherp	100	89.644	ENSPNYG00000003942	cherp	100	88.889	Pundamilia_nyererei
ENSMALG00000020688	cherp	79	73.760	ENSPNAG00000017179	cherp	100	70.188	Pygocentrus_nattereri
ENSMALG00000020688	cherp	79	65.122	ENSRNOG00000012323	Cherp	99	65.536	Rattus_norvegicus
ENSMALG00000020688	cherp	79	66.186	ENSRBIG00000038621	CHERP	99	65.393	Rhinopithecus_bieti
ENSMALG00000020688	cherp	79	64.910	ENSRROG00000040770	CHERP	99	64.465	Rhinopithecus_roxellana
ENSMALG00000020688	cherp	99	59.133	ENSSBOG00000014492	CHERP	99	64.398	Saimiri_boliviensis_boliviensis
ENSMALG00000020688	cherp	64	83.544	ENSSFOG00015008022	cherp	84	78.947	Scleropages_formosus
ENSMALG00000020688	cherp	100	87.045	ENSSMAG00000005362	cherp	100	87.259	Scophthalmus_maximus
ENSMALG00000020688	cherp	100	90.456	ENSSDUG00000019712	cherp	100	89.714	Seriola_dumerili
ENSMALG00000020688	cherp	100	91.337	ENSSLDG00000012659	cherp	100	90.909	Seriola_lalandi_dorsalis
ENSMALG00000020688	cherp	79	68.059	ENSSPUG00000008901	CHERP	99	67.211	Sphenodon_punctatus
ENSMALG00000020688	cherp	100	90.507	ENSSPAG00000010681	cherp	100	89.752	Stegastes_partitus
ENSMALG00000020688	cherp	79	66.275	ENSSSCG00000013860	CHERP	80	67.733	Sus_scrofa
ENSMALG00000020688	cherp	79	67.729	ENSTGUG00000000680	CHERP	99	66.056	Taeniopygia_guttata
ENSMALG00000020688	cherp	100	79.702	ENSTRUG00000007429	cherp	100	80.871	Takifugu_rubripes
ENSMALG00000020688	cherp	99	79.022	ENSTNIG00000003363	cherp	80	83.472	Tetraodon_nigroviridis
ENSMALG00000020688	cherp	66	68.750	ENSTTRG00000015006	CHERP	69	68.750	Tursiops_truncatus
ENSMALG00000020688	cherp	99	60.399	ENSUAMG00000017295	CHERP	80	65.659	Ursus_americanus
ENSMALG00000020688	cherp	79	65.000	ENSVVUG00000016546	CHERP	80	67.016	Vulpes_vulpes
ENSMALG00000020688	cherp	99	65.705	ENSXETG00000002072	cherp	97	66.096	Xenopus_tropicalis