EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000020839 (Gene tree)
Gene ID: 109966897
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein-associated protein B'
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 10832 bases
Position: chrKV884809.1:1790412-1801243
Accession: 109966897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000030126	LSM	PF01423.22	9.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000030659	-	4877	XM_020612122	ENSMALP00000030126	296 (aa)	XP_020467778	-

Gene Model

Click here to download ENSMALG00000020839's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000020839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000020839	snrpb	56	94.048	ENSG00000125835	SNRPB	74	98.077	Homo_sapiens
ENSMALG00000020839	snrpb	92	87.500	ENSAPOG00000019606	snrpb	91	87.500	Acanthochromis_polyacanthus
ENSMALG00000020839	snrpb	56	94.012	ENSAMEG00000011353	SNRPB	74	92.222	Ailuropoda_melanoleuca
ENSMALG00000020839	snrpb	75	99.099	ENSACIG00000014480	snrpb	99	99.099	Amphilophus_citrinellus
ENSMALG00000020839	snrpb	81	98.750	ENSAOCG00000006876	snrpb	100	98.750	Amphiprion_ocellaris
ENSMALG00000020839	snrpb	81	98.750	ENSAPEG00000021585	snrpb	100	98.750	Amphiprion_percula
ENSMALG00000020839	snrpb	81	99.167	ENSATEG00000009836	snrpb	100	99.167	Anabas_testudineus
ENSMALG00000020839	snrpb	53	95.000	ENSACAG00000002053	SNRPB	75	92.486	Anolis_carolinensis
ENSMALG00000020839	snrpb	56	86.905	ENSANAG00000036271	-	73	84.530	Aotus_nancymaae
ENSMALG00000020839	snrpb	56	94.048	ENSANAG00000024443	-	78	92.265	Aotus_nancymaae
ENSMALG00000020839	snrpb	81	99.167	ENSACLG00000014707	snrpb	100	99.167	Astatotilapia_calliptera
ENSMALG00000020839	snrpb	80	97.059	ENSAMXG00000029434	snrpb	99	97.059	Astyanax_mexicanus
ENSMALG00000020839	snrpb	69	85.577	ENSBTAG00000001038	SNRPB	78	92.265	Bos_taurus
ENSMALG00000020839	snrpb	72	83.796	ENSCJAG00000023097	-	75	84.530	Callithrix_jacchus
ENSMALG00000020839	snrpb	56	94.048	ENSCJAG00000020971	-	78	92.265	Callithrix_jacchus
ENSMALG00000020839	snrpb	50	81.457	ENSCAFG00000031109	-	78	79.679	Canis_familiaris
ENSMALG00000020839	snrpb	56	94.048	ENSCAFG00000006693	-	78	92.265	Canis_familiaris
ENSMALG00000020839	snrpb	56	94.048	ENSCAFG00020016981	-	75	92.265	Canis_lupus_dingo
ENSMALG00000020839	snrpb	56	94.048	ENSCHIG00000025449	-	78	92.265	Capra_hircus
ENSMALG00000020839	snrpb	61	74.033	ENSTSYG00000032303	-	65	72.067	Carlito_syrichta
ENSMALG00000020839	snrpb	56	94.048	ENSTSYG00000014498	-	78	92.265	Carlito_syrichta
ENSMALG00000020839	snrpb	56	94.012	ENSCAPG00000012669	SNRPB	78	92.222	Cavia_aperea
ENSMALG00000020839	snrpb	56	94.048	ENSCPOG00000039408	SNRPB	78	92.265	Cavia_porcellus
ENSMALG00000020839	snrpb	56	94.048	ENSCCAG00000026002	SNRPB	78	92.265	Cebus_capucinus
ENSMALG00000020839	snrpb	56	94.048	ENSCATG00000030230	SNRPB	78	92.265	Cercocebus_atys
ENSMALG00000020839	snrpb	56	94.048	ENSCLAG00000012442	SNRPB	76	92.265	Chinchilla_lanigera
ENSMALG00000020839	snrpb	56	94.048	ENSCSAG00000010840	SNRPB	78	92.265	Chlorocebus_sabaeus
ENSMALG00000020839	snrpb	56	95.833	ENSCPBG00000026801	SNRPB	79	93.370	Chrysemys_picta_bellii
ENSMALG00000020839	snrpb	56	94.048	ENSCANG00000019461	SNRPB	78	92.265	Colobus_angolensis_palliatus
ENSMALG00000020839	snrpb	56	94.048	ENSCGRG00001023046	Snrpb	78	92.265	Cricetulus_griseus_chok1gshd
ENSMALG00000020839	snrpb	54	93.865	ENSCGRG00000010423	Snrpb	77	91.908	Cricetulus_griseus_crigri
ENSMALG00000020839	snrpb	81	97.500	ENSCSEG00000020328	snrpb	100	97.500	Cynoglossus_semilaevis
ENSMALG00000020839	snrpb	81	96.266	ENSDARG00000011125	snrpb	100	96.266	Danio_rerio
ENSMALG00000020839	snrpb	56	94.048	ENSDNOG00000015545	-	75	92.265	Dasypus_novemcinctus
ENSMALG00000020839	snrpb	56	88.095	ENSDNOG00000007896	-	74	86.740	Dasypus_novemcinctus
ENSMALG00000020839	snrpb	54	93.827	ENSDORG00000029558	Snrpb	76	92.000	Dipodomys_ordii
ENSMALG00000020839	snrpb	62	62.437	FBgn0262601	SmB	90	62.637	Drosophila_melanogaster
ENSMALG00000020839	snrpb	56	73.810	ENSETEG00000006830	SNRPB	79	72.376	Echinops_telfairi
ENSMALG00000020839	snrpb	62	78.689	ENSEBUG00000007467	SNRPB	62	87.248	Eptatretus_burgeri
ENSMALG00000020839	snrpb	56	93.452	ENSEASG00005012991	SNRPB	78	91.713	Equus_asinus_asinus
ENSMALG00000020839	snrpb	56	94.048	ENSECAG00000011944	SNRPB	78	92.265	Equus_caballus
ENSMALG00000020839	snrpb	56	94.048	ENSEEUG00000015568	SNRPB	64	92.265	Erinaceus_europaeus
ENSMALG00000020839	snrpb	80	97.046	ENSELUG00000014564	snrpb	99	97.046	Esox_lucius
ENSMALG00000020839	snrpb	56	94.048	ENSFCAG00000034090	-	78	92.265	Felis_catus
ENSMALG00000020839	snrpb	53	95.625	ENSFALG00000004866	SNRPB	73	93.491	Ficedula_albicollis
ENSMALG00000020839	snrpb	56	94.048	ENSFDAG00000009937	SNRPB	78	92.265	Fukomys_damarensis
ENSMALG00000020839	snrpb	56	95.833	ENSGALG00000035421	SNRPN	74	93.785	Gallus_gallus
ENSMALG00000020839	snrpb	76	97.345	ENSGAFG00000019558	snrpb	99	97.345	Gambusia_affinis
ENSMALG00000020839	snrpb	81	97.500	ENSGACG00000003262	snrpb	100	97.500	Gasterosteus_aculeatus
ENSMALG00000020839	snrpb	56	95.833	ENSGAGG00000001308	SNRPB	75	93.370	Gopherus_agassizii
ENSMALG00000020839	snrpb	56	94.048	ENSGGOG00000016138	SNRPB	78	92.265	Gorilla_gorilla
ENSMALG00000020839	snrpb	81	99.167	ENSHBUG00000008369	snrpb	100	99.167	Haplochromis_burtoni
ENSMALG00000020839	snrpb	51	85.333	ENSHGLG00000016505	-	84	81.143	Heterocephalus_glaber_female
ENSMALG00000020839	snrpb	56	94.048	ENSHGLG00000016241	-	78	92.265	Heterocephalus_glaber_female
ENSMALG00000020839	snrpb	51	85.333	ENSHGLG00100004178	-	84	81.143	Heterocephalus_glaber_male
ENSMALG00000020839	snrpb	56	94.048	ENSHGLG00100012877	-	78	92.265	Heterocephalus_glaber_male
ENSMALG00000020839	snrpb	81	97.917	ENSHCOG00000014888	snrpb	100	97.917	Hippocampus_comes
ENSMALG00000020839	snrpb	80	96.639	ENSIPUG00000024569	SNRPB	99	96.639	Ictalurus_punctatus
ENSMALG00000020839	snrpb	56	92.262	ENSSTOG00000033664	-	75	90.608	Ictidomys_tridecemlineatus
ENSMALG00000020839	snrpb	56	94.048	ENSJJAG00000024170	Snrpb	78	92.265	Jaculus_jaculus
ENSMALG00000020839	snrpb	77	97.807	ENSKMAG00000014494	snrpb	93	97.807	Kryptolebias_marmoratus
ENSMALG00000020839	snrpb	81	98.333	ENSLBEG00000005678	snrpb	100	98.333	Labrus_bergylta
ENSMALG00000020839	snrpb	61	93.989	ENSLACG00000011459	SNRPB	75	93.370	Latimeria_chalumnae
ENSMALG00000020839	snrpb	80	97.059	ENSLOCG00000002687	snrpb	99	97.059	Lepisosteus_oculatus
ENSMALG00000020839	snrpb	56	89.820	ENSLAFG00000017588	SNRPB	77	88.333	Loxodonta_africana
ENSMALG00000020839	snrpb	56	94.048	ENSMFAG00000038756	SNRPB	78	92.265	Macaca_fascicularis
ENSMALG00000020839	snrpb	56	94.048	ENSMMUG00000010050	SNRPB	78	92.265	Macaca_mulatta
ENSMALG00000020839	snrpb	56	94.048	ENSMNEG00000027954	SNRPB	78	92.265	Macaca_nemestrina
ENSMALG00000020839	snrpb	56	94.048	ENSMLEG00000022346	SNRPB	78	92.265	Mandrillus_leucophaeus
ENSMALG00000020839	snrpb	82	98.347	ENSMAMG00000009294	snrpb	98	98.347	Mastacembelus_armatus
ENSMALG00000020839	snrpb	81	99.167	ENSMZEG00005011856	snrpb	100	99.167	Maylandia_zebra
ENSMALG00000020839	snrpb	56	94.048	ENSMICG00000016519	SNRPB	78	92.265	Microcebus_murinus
ENSMALG00000020839	snrpb	60	83.425	ENSMICG00000015983	-	83	82.320	Microcebus_murinus
ENSMALG00000020839	snrpb	56	93.452	ENSMOCG00000002892	-	78	91.713	Microtus_ochrogaster
ENSMALG00000020839	snrpb	77	98.238	ENSMMOG00000013226	snrpb	97	98.238	Mola_mola
ENSMALG00000020839	snrpb	56	94.048	MGP_CAROLIEiJ_G0024293	Snrpb	74	98.077	Mus_caroli
ENSMALG00000020839	snrpb	56	94.048	ENSMUSG00000027404	Snrpb	74	98.077	Mus_musculus
ENSMALG00000020839	snrpb	56	94.048	MGP_PahariEiJ_G0025738	Snrpb	74	98.077	Mus_pahari
ENSMALG00000020839	snrpb	56	94.048	MGP_SPRETEiJ_G0025213	Snrpb	73	98.077	Mus_spretus
ENSMALG00000020839	snrpb	56	94.048	ENSMPUG00000009283	SNRPB	78	92.265	Mustela_putorius_furo
ENSMALG00000020839	snrpb	56	90.476	ENSMLUG00000016951	SNRPB	75	88.950	Myotis_lucifugus
ENSMALG00000020839	snrpb	56	94.048	ENSNGAG00000012051	Snrpb	78	92.265	Nannospalax_galili
ENSMALG00000020839	snrpb	77	96.930	ENSNBRG00000006353	snrpb	87	96.930	Neolamprologus_brichardi
ENSMALG00000020839	snrpb	56	94.048	ENSNLEG00000029067	SNRPB	76	92.222	Nomascus_leucogenys
ENSMALG00000020839	snrpb	56	94.012	ENSMEUG00000015625	SNRPB	80	92.222	Notamacropus_eugenii
ENSMALG00000020839	snrpb	56	94.048	ENSODEG00000004305	-	78	92.265	Octodon_degus
ENSMALG00000020839	snrpb	56	89.286	ENSODEG00000016060	-	76	87.293	Octodon_degus
ENSMALG00000020839	snrpb	81	99.167	ENSONIG00000000248	snrpb	100	99.167	Oreochromis_niloticus
ENSMALG00000020839	snrpb	56	94.048	ENSOCUG00000014042	-	75	92.265	Oryctolagus_cuniculus
ENSMALG00000020839	snrpb	72	64.953	ENSOCUG00000026813	-	77	62.921	Oryctolagus_cuniculus
ENSMALG00000020839	snrpb	59	88.268	ENSOCUG00000022423	-	88	88.304	Oryctolagus_cuniculus
ENSMALG00000020839	snrpb	72	86.636	ENSOCUG00000021456	-	75	88.398	Oryctolagus_cuniculus
ENSMALG00000020839	snrpb	56	91.667	ENSOCUG00000028215	-	75	90.055	Oryctolagus_cuniculus
ENSMALG00000020839	snrpb	81	98.333	ENSORLG00000021862	snrpb	100	98.333	Oryzias_latipes
ENSMALG00000020839	snrpb	56	94.048	ENSOGAG00000016149	SNRPB	75	92.265	Otolemur_garnettii
ENSMALG00000020839	snrpb	56	94.048	ENSOARG00000006740	SNRPB	78	92.265	Ovis_aries
ENSMALG00000020839	snrpb	56	94.048	ENSPPAG00000036314	SNRPB	78	92.265	Pan_paniscus
ENSMALG00000020839	snrpb	56	94.048	ENSPPRG00000003233	-	78	92.265	Panthera_pardus
ENSMALG00000020839	snrpb	56	94.012	ENSPTIG00000007468	SNRPB	78	92.222	Panthera_tigris_altaica
ENSMALG00000020839	snrpb	56	94.048	ENSPTRG00000013176	SNRPB	78	92.265	Pan_troglodytes
ENSMALG00000020839	snrpb	56	94.048	ENSPANG00000020362	SNRPB	75	92.265	Papio_anubis
ENSMALG00000020839	snrpb	80	95.798	ENSPKIG00000002865	snrpb	99	95.798	Paramormyrops_kingsleyae
ENSMALG00000020839	snrpb	56	95.808	ENSPSIG00000014125	SNRPB	74	93.333	Pelodiscus_sinensis
ENSMALG00000020839	snrpb	59	97.143	ENSPMGG00000016349	snrpb	74	97.110	Periophthalmus_magnuspinnatus
ENSMALG00000020839	snrpb	56	94.048	ENSPEMG00000007948	Snrpb	78	92.265	Peromyscus_maniculatus_bairdii
ENSMALG00000020839	snrpb	56	93.413	ENSPCIG00000004694	SNRPB	75	91.667	Phascolarctos_cinereus
ENSMALG00000020839	snrpb	50	99.329	ENSPFOG00000011802	snrpb	63	99.329	Poecilia_formosa
ENSMALG00000020839	snrpb	72	80.909	ENSPLAG00000014130	snrpb	59	99.259	Poecilia_latipinna
ENSMALG00000020839	snrpb	72	77.570	ENSPREG00000015515	snrpb	62	99.259	Poecilia_reticulata
ENSMALG00000020839	snrpb	56	94.048	ENSPPYG00000010841	SNRPB	78	92.265	Pongo_abelii
ENSMALG00000020839	snrpb	56	94.048	ENSPCOG00000013686	SNRPB	78	92.265	Propithecus_coquereli
ENSMALG00000020839	snrpb	56	92.857	ENSPVAG00000017013	SNRPB	63	91.160	Pteropus_vampyrus
ENSMALG00000020839	snrpb	81	99.167	ENSPNYG00000014788	snrpb	100	99.167	Pundamilia_nyererei
ENSMALG00000020839	snrpb	80	96.639	ENSPNAG00000016126	snrpb	99	96.639	Pygocentrus_nattereri
ENSMALG00000020839	snrpb	56	94.048	ENSRNOG00000006961	Snrpb	73	98.077	Rattus_norvegicus
ENSMALG00000020839	snrpb	56	94.048	ENSRBIG00000040505	SNRPB	78	92.778	Rhinopithecus_bieti
ENSMALG00000020839	snrpb	56	94.048	ENSRROG00000036094	SNRPB	78	92.265	Rhinopithecus_roxellana
ENSMALG00000020839	snrpb	56	94.048	ENSSBOG00000027310	SNRPB	78	92.265	Saimiri_boliviensis_boliviensis
ENSMALG00000020839	snrpb	56	94.643	ENSSHAG00000010394	SNRPB	75	92.818	Sarcophilus_harrisii
ENSMALG00000020839	snrpb	80	95.378	ENSSFOG00015002870	snrpb	99	95.378	Scleropages_formosus
ENSMALG00000020839	snrpb	81	97.917	ENSSMAG00000006766	snrpb	100	97.917	Scophthalmus_maximus
ENSMALG00000020839	snrpb	81	99.167	ENSSDUG00000018539	snrpb	100	99.167	Seriola_dumerili
ENSMALG00000020839	snrpb	81	99.167	ENSSLDG00000022391	snrpb	100	99.167	Seriola_lalandi_dorsalis
ENSMALG00000020839	snrpb	56	78.443	ENSSARG00000003084	SNRPB	77	77.778	Sorex_araneus
ENSMALG00000020839	snrpb	56	95.808	ENSSPUG00000015659	SNRPB	75	93.333	Sphenodon_punctatus
ENSMALG00000020839	snrpb	81	99.167	ENSSPAG00000021992	snrpb	100	99.167	Stegastes_partitus
ENSMALG00000020839	snrpb	56	94.048	ENSSSCG00000040857	-	78	92.265	Sus_scrofa
ENSMALG00000020839	snrpb	61	71.585	ENSSSCG00000011966	-	76	68.508	Sus_scrofa
ENSMALG00000020839	snrpb	57	82.941	ENSTGUG00000005684	SNRPB	59	96.429	Taeniopygia_guttata
ENSMALG00000020839	snrpb	77	97.807	ENSTRUG00000023094	snrpb	99	97.807	Takifugu_rubripes
ENSMALG00000020839	snrpb	81	97.917	ENSTNIG00000002991	snrpb	100	97.917	Tetraodon_nigroviridis
ENSMALG00000020839	snrpb	56	94.048	ENSUAMG00000005984	-	87	92.265	Ursus_americanus
ENSMALG00000020839	snrpb	64	75.661	ENSUMAG00000002123	-	63	94.161	Ursus_maritimus
ENSMALG00000020839	snrpb	56	93.452	ENSVVUG00000025654	-	75	91.713	Vulpes_vulpes
ENSMALG00000020839	snrpb	78	73.504	ENSVVUG00000010086	-	78	75.138	Vulpes_vulpes
ENSMALG00000020839	snrpb	51	97.333	ENSXETG00000027266	snrpb	76	92.265	Xenopus_tropicalis