EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000020932 (Gene tree)
Gene ID: 109958441
Gene Symbol: tnrc6c2
Alias: si:dkey-10p5.9
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 25364 bases
Position: chrKV884720.1:199821-225184
Accession: 109958441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000030267	Ago_hook	PF10427.9	8.6e-09	1	1
ENSMALP00000030267	RRM_1	PF00076.22	6.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000030802	-	5612	XM_020597087	ENSMALP00000030267	1648 (aa)	XP_020452743	-

Gene Model

Click here to download ENSMALG00000020932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000020932's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000020932	tnrc6c2	100	88.459	ENSAOCG00000017648	tnrc6c2	87	88.882	Amphiprion_ocellaris
ENSMALG00000020932	tnrc6c2	95	89.266	ENSATEG00000003656	tnrc6c2	57	89.814	Anabas_testudineus
ENSMALG00000020932	tnrc6c2	100	86.473	ENSACLG00000006469	tnrc6c2	88	86.292	Astatotilapia_calliptera
ENSMALG00000020932	tnrc6c2	100	59.050	ENSAMXG00000009579	tnrc6c2	99	57.741	Astyanax_mexicanus
ENSMALG00000020932	tnrc6c2	100	58.914	ENSDARG00000103851	tnrc6c2	100	57.369	Danio_rerio
ENSMALG00000020932	tnrc6c2	91	67.745	ENSELUG00000008149	-	94	66.877	Esox_lucius
ENSMALG00000020932	tnrc6c2	100	61.530	ENSELUG00000007206	tnrc6c2	97	73.873	Esox_lucius
ENSMALG00000020932	tnrc6c2	100	81.824	ENSFHEG00000003901	tnrc6c2	100	80.676	Fundulus_heteroclitus
ENSMALG00000020932	tnrc6c2	100	70.616	ENSGACG00000019401	tnrc6c2	90	77.102	Gasterosteus_aculeatus
ENSMALG00000020932	tnrc6c2	100	86.473	ENSHBUG00000018310	tnrc6c2	88	86.292	Haplochromis_burtoni
ENSMALG00000020932	tnrc6c2	100	79.520	ENSHCOG00000017802	tnrc6c2	87	79.147	Hippocampus_comes
ENSMALG00000020932	tnrc6c2	100	54.741	ENSIPUG00000022767	tnrc6c2	99	52.476	Ictalurus_punctatus
ENSMALG00000020932	tnrc6c2	100	89.050	ENSMAMG00000001718	tnrc6c2	100	89.171	Mastacembelus_armatus
ENSMALG00000020932	tnrc6c2	100	86.534	ENSMZEG00005023905	tnrc6c2	88	86.353	Maylandia_zebra
ENSMALG00000020932	tnrc6c2	95	88.197	ENSNBRG00000000452	tnrc6c2	57	88.634	Neolamprologus_brichardi
ENSMALG00000020932	tnrc6c2	92	91.830	ENSONIG00000018123	tnrc6c2	100	82.972	Oreochromis_niloticus
ENSMALG00000020932	tnrc6c2	100	81.231	ENSORLG00000003327	tnrc6c2	87	80.929	Oryzias_latipes
ENSMALG00000020932	tnrc6c2	100	80.205	ENSORLG00020010730	tnrc6c2	87	80.688	Oryzias_latipes_hni
ENSMALG00000020932	tnrc6c2	100	81.110	ENSORLG00015009232	tnrc6c2	87	81.050	Oryzias_latipes_hsok
ENSMALG00000020932	tnrc6c2	100	81.955	ENSOMEG00000017952	tnrc6c2	87	81.774	Oryzias_melastigma
ENSMALG00000020932	tnrc6c2	95	78.188	ENSPFOG00000011590	tnrc6c2	53	78.504	Poecilia_formosa
ENSMALG00000020932	tnrc6c2	96	86.506	ENSPLAG00000006992	tnrc6c2	60	86.506	Poecilia_latipinna
ENSMALG00000020932	tnrc6c2	100	83.062	ENSPMEG00000012946	tnrc6c2	100	86.402	Poecilia_mexicana
ENSMALG00000020932	tnrc6c2	100	77.539	ENSPREG00000015823	tnrc6c2	60	88.021	Poecilia_reticulata
ENSMALG00000020932	tnrc6c2	100	86.844	ENSPNYG00000002582	tnrc6c2	100	86.844	Pundamilia_nyererei
ENSMALG00000020932	tnrc6c2	100	57.134	ENSPNAG00000026838	tnrc6c2	99	57.798	Pygocentrus_nattereri
ENSMALG00000020932	tnrc6c2	100	85.448	ENSSMAG00000015145	tnrc6c2	100	85.568	Scophthalmus_maximus
ENSMALG00000020932	tnrc6c2	100	89.843	ENSSDUG00000020741	tnrc6c2	100	89.480	Seriola_dumerili
ENSMALG00000020932	tnrc6c2	100	89.541	ENSSLDG00000002077	tnrc6c2	100	89.178	Seriola_lalandi_dorsalis
ENSMALG00000020932	tnrc6c2	100	89.734	ENSSPAG00000013052	tnrc6c2	87	90.459	Stegastes_partitus
ENSMALG00000020932	tnrc6c2	92	85.169	ENSTNIG00000004178	tnrc6c2	90	84.079	Tetraodon_nigroviridis
ENSMALG00000020932	tnrc6c2	55	85.384	ENSXCOG00000013252	tnrc6c2	100	77.286	Xiphophorus_couchianus
ENSMALG00000020932	tnrc6c2	100	82.771	ENSXMAG00000006739	tnrc6c2	100	82.289	Xiphophorus_maculatus