EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000021172 (Gene tree)
Gene ID: -
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 8281 bases
Position: chrKV884724.1:150356-158636
Accession: 109958961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000030650	zf-C2H2	PF00096.26	1.3e-30	1	5
ENSMALP00000030650	zf-C2H2	PF00096.26	1.3e-30	2	5
ENSMALP00000030650	zf-C2H2	PF00096.26	1.3e-30	3	5
ENSMALP00000030650	zf-C2H2	PF00096.26	1.3e-30	4	5
ENSMALP00000030650	zf-C2H2	PF00096.26	1.3e-30	5	5
ENSMALP00000030658	zf-C2H2	PF00096.26	2e-23	1	4
ENSMALP00000030658	zf-C2H2	PF00096.26	2e-23	2	4
ENSMALP00000030658	zf-C2H2	PF00096.26	2e-23	3	4
ENSMALP00000030658	zf-C2H2	PF00096.26	2e-23	4	4
ENSMALP00000030650	zf-met	PF12874.7	6.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000031198	-	1926	-	ENSMALP00000030658	641 (aa)	-	-
ENSMALT00000031190	-	1971	XM_020597961	ENSMALP00000030650	656 (aa)	XP_020453617	-

Gene Model

Click here to download ENSMALG00000021172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000021172's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000021172	patz1	51	37.255	ENSMALG00000012155	-	92	39.157
ENSMALG00000021172	patz1	52	36.283	ENSMALG00000000252	-	80	36.283
ENSMALG00000021172	patz1	53	32.234	ENSMALG00000005562	-	63	35.075
ENSMALG00000021172	patz1	52	33.929	ENSMALG00000004216	-	61	33.929
ENSMALG00000021172	patz1	54	31.496	ENSMALG00000010959	-	99	32.509
ENSMALG00000021172	patz1	50	32.512	ENSMALG00000007403	-	80	32.512
ENSMALG00000021172	patz1	53	36.364	ENSMALG00000008493	zbtb17	61	36.364
ENSMALG00000021172	patz1	53	34.010	ENSMALG00000012129	-	76	34.010
ENSMALG00000021172	patz1	55	45.000	ENSMALG00000009070	bcl6b	56	45.000
ENSMALG00000021172	patz1	51	30.342	ENSMALG00000003423	-	94	37.079
ENSMALG00000021172	patz1	55	34.649	ENSMALG00000021985	-	82	35.484
ENSMALG00000021172	patz1	61	31.000	ENSMALG00000002361	PRDM15	54	33.133
ENSMALG00000021172	patz1	54	43.182	ENSMALG00000015655	-	99	38.889
ENSMALG00000021172	patz1	54	31.092	ENSMALG00000012920	zbtb16a	57	31.148
ENSMALG00000021172	patz1	50	37.162	ENSMALG00000011992	-	78	35.135
ENSMALG00000021172	patz1	50	33.333	ENSMALG00000004984	-	91	37.900
ENSMALG00000021172	patz1	51	33.621	ENSMALG00000009834	-	72	33.621
ENSMALG00000021172	patz1	54	37.500	ENSMALG00000004647	-	90	37.500
ENSMALG00000021172	patz1	61	30.137	ENSMALG00000005554	-	87	34.375
ENSMALG00000021172	patz1	55	34.234	ENSMALG00000008786	-	86	34.234
ENSMALG00000021172	patz1	53	35.135	ENSMALG00000011756	-	63	31.169
ENSMALG00000021172	patz1	52	32.766	ENSMALG00000014911	-	70	32.766
ENSMALG00000021172	patz1	50	41.497	ENSMALG00000019139	-	75	36.747
ENSMALG00000021172	patz1	54	36.842	ENSMALG00000012116	-	96	36.842
ENSMALG00000021172	patz1	60	33.333	ENSMALG00000008930	-	77	36.434
ENSMALG00000021172	patz1	52	30.131	ENSMALG00000021084	-	59	31.707
ENSMALG00000021172	patz1	51	37.748	ENSMALG00000001085	-	90	37.748
ENSMALG00000021172	patz1	54	31.752	ENSMALG00000011969	-	79	31.752
ENSMALG00000021172	patz1	54	34.742	ENSMALG00000012008	-	81	34.742
ENSMALG00000021172	patz1	61	40.000	ENSMALG00000004579	-	94	42.105
ENSMALG00000021172	patz1	57	37.931	ENSMALG00000007051	-	98	36.290
ENSMALG00000021172	patz1	53	33.645	ENSMALG00000010693	-	64	33.645
ENSMALG00000021172	patz1	52	32.292	ENSMALG00000003294	-	99	34.978
ENSMALG00000021172	patz1	52	32.243	ENSMALG00000019842	ZNF319	81	32.243
ENSMALG00000021172	patz1	52	36.111	ENSMALG00000003588	znf236	59	36.782
ENSMALG00000021172	patz1	52	40.964	ENSMALG00000006887	-	91	36.546
ENSMALG00000021172	patz1	54	37.500	ENSMALG00000003975	-	99	32.468
ENSMALG00000021172	patz1	56	37.037	ENSMALG00000012043	-	97	35.000
ENSMALG00000021172	patz1	52	41.611	ENSMALG00000007812	-	92	41.611
ENSMALG00000021172	patz1	55	34.783	ENSMALG00000019422	zbtb24	53	34.783
ENSMALG00000021172	patz1	59	31.884	ENSMALG00000018074	-	69	34.746
ENSMALG00000021172	patz1	54	32.642	ENSMALG00000005901	znf319b	68	32.642
ENSMALG00000021172	patz1	50	35.542	ENSMALG00000005203	-	92	35.542
ENSMALG00000021172	patz1	55	40.741	ENSMALG00000022544	znf526	50	40.741
ENSMALG00000021172	patz1	59	30.909	ENSMALG00000011860	-	58	35.185
ENSMALG00000021172	patz1	52	40.741	ENSMALG00000020889	-	97	40.741
ENSMALG00000021172	patz1	51	34.538	ENSMALG00000004413	-	99	31.452
ENSMALG00000021172	patz1	55	32.035	ENSMALG00000018062	-	57	30.968
ENSMALG00000021172	patz1	52	36.111	ENSMALG00000001487	-	88	36.111
ENSMALG00000021172	patz1	51	33.500	ENSMALG00000003906	-	84	37.241
ENSMALG00000021172	patz1	56	34.731	ENSMALG00000012721	-	72	36.530
ENSMALG00000021172	patz1	87	37.584	ENSMALG00000002941	zbtb49	69	37.584
ENSMALG00000021172	patz1	52	34.737	ENSMALG00000013323	-	80	34.737
ENSMALG00000021172	patz1	50	39.450	ENSMALG00000000494	-	63	39.450
ENSMALG00000021172	patz1	54	33.333	ENSMALG00000013321	-	66	31.250
ENSMALG00000021172	patz1	53	31.837	ENSMALG00000005239	-	91	37.255
ENSMALG00000021172	patz1	53	38.012	ENSMALG00000013934	prdm5	72	38.012
ENSMALG00000021172	patz1	70	34.483	ENSMALG00000005808	zbtb41	54	34.483
ENSMALG00000021172	patz1	53	32.558	ENSMALG00000009233	znf384l	57	32.558
ENSMALG00000021172	patz1	60	32.609	ENSMALG00000012056	-	81	32.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000021172	patz1	100	56.657	ENSG00000100105	PATZ1	100	56.941	Homo_sapiens
ENSMALG00000021172	patz1	100	91.195	ENSAPOG00000018447	patz1	100	88.361	Acanthochromis_polyacanthus
ENSMALG00000021172	patz1	100	56.921	ENSAMEG00000007074	PATZ1	100	57.143	Ailuropoda_melanoleuca
ENSMALG00000021172	patz1	100	84.320	ENSACIG00000016779	patz1	100	84.320	Amphilophus_citrinellus
ENSMALG00000021172	patz1	100	87.596	ENSAPEG00000013354	patz1	100	87.596	Amphiprion_percula
ENSMALG00000021172	patz1	100	95.597	ENSATEG00000011260	patz1	91	95.597	Anabas_testudineus
ENSMALG00000021172	patz1	88	56.856	ENSAPLG00000003934	PATZ1	99	56.856	Anas_platyrhynchos
ENSMALG00000021172	patz1	100	56.657	ENSANAG00000029603	PATZ1	100	56.941	Aotus_nancymaae
ENSMALG00000021172	patz1	91	89.796	ENSAMXG00000002273	patz1	100	63.649	Astyanax_mexicanus
ENSMALG00000021172	patz1	100	56.719	ENSBTAG00000005478	PATZ1	100	57.143	Bos_taurus
ENSMALG00000021172	patz1	100	56.657	ENSCJAG00000010978	PATZ1	100	56.941	Callithrix_jacchus
ENSMALG00000021172	patz1	100	56.719	ENSCAFG00000013087	PATZ1	100	57.143	Canis_familiaris
ENSMALG00000021172	patz1	100	56.719	ENSCHIG00000020203	PATZ1	100	57.143	Capra_hircus
ENSMALG00000021172	patz1	100	56.860	ENSTSYG00000033183	PATZ1	100	57.143	Carlito_syrichta
ENSMALG00000021172	patz1	100	56.657	ENSCCAG00000028772	PATZ1	100	56.941	Cebus_capucinus
ENSMALG00000021172	patz1	100	56.577	ENSCATG00000006101	PATZ1	100	56.860	Cercocebus_atys
ENSMALG00000021172	patz1	100	56.497	ENSCPBG00000011277	PATZ1	100	57.062	Chrysemys_picta_bellii
ENSMALG00000021172	patz1	100	56.577	ENSCANG00000024972	PATZ1	100	56.860	Colobus_angolensis_palliatus
ENSMALG00000021172	patz1	100	55.446	ENSCGRG00001004071	Patz1	100	55.446	Cricetulus_griseus_chok1gshd
ENSMALG00000021172	patz1	93	55.505	ENSCGRG00000004814	Patz1	100	55.505	Cricetulus_griseus_crigri
ENSMALG00000021172	patz1	100	75.718	ENSCSEG00000001385	patz1	100	75.862	Cynoglossus_semilaevis
ENSMALG00000021172	patz1	100	83.384	ENSCVAG00000007684	patz1	100	83.384	Cyprinodon_variegatus
ENSMALG00000021172	patz1	100	68.388	ENSDARG00000076584	patz1	100	67.852	Danio_rerio
ENSMALG00000021172	patz1	89	56.309	ENSDNOG00000003183	PATZ1	100	56.782	Dasypus_novemcinctus
ENSMALG00000021172	patz1	100	56.860	ENSDORG00000023834	Patz1	100	57.284	Dipodomys_ordii
ENSMALG00000021172	patz1	100	56.719	ENSECAG00000025030	PATZ1	100	57.001	Equus_caballus
ENSMALG00000021172	patz1	100	74.257	ENSELUG00000002333	patz1	100	74.257	Esox_lucius
ENSMALG00000021172	patz1	100	56.719	ENSFCAG00000030253	PATZ1	100	57.143	Felis_catus
ENSMALG00000021172	patz1	89	56.486	ENSFALG00000007450	PATZ1	100	56.486	Ficedula_albicollis
ENSMALG00000021172	patz1	96	53.869	ENSFDAG00000005614	PATZ1	100	54.307	Fukomys_damarensis
ENSMALG00000021172	patz1	100	82.290	ENSFHEG00000014755	patz1	100	82.290	Fundulus_heteroclitus
ENSMALG00000021172	patz1	100	68.946	ENSGMOG00000001062	patz1	100	69.231	Gadus_morhua
ENSMALG00000021172	patz1	100	56.276	ENSGALG00000006934	PATZ1	100	56.761	Gallus_gallus
ENSMALG00000021172	patz1	100	84.404	ENSGAFG00000010053	patz1	100	84.404	Gambusia_affinis
ENSMALG00000021172	patz1	88	56.977	ENSGAGG00000003214	PATZ1	100	56.977	Gopherus_agassizii
ENSMALG00000021172	patz1	100	56.577	ENSGGOG00000017171	PATZ1	100	56.860	Gorilla_gorilla
ENSMALG00000021172	patz1	99	80.503	ENSHCOG00000017644	patz1	99	73.540	Hippocampus_comes
ENSMALG00000021172	patz1	100	68.313	ENSIPUG00000017653	patz1	99	68.714	Ictalurus_punctatus
ENSMALG00000021172	patz1	100	56.577	ENSSTOG00000020707	PATZ1	100	56.962	Ictidomys_tridecemlineatus
ENSMALG00000021172	patz1	100	56.657	ENSJJAG00000015259	Patz1	99	57.819	Jaculus_jaculus
ENSMALG00000021172	patz1	100	79.586	ENSKMAG00000008157	patz1	100	80.030	Kryptolebias_marmoratus
ENSMALG00000021172	patz1	100	57.781	ENSLAFG00000002317	PATZ1	100	58.069	Loxodonta_africana
ENSMALG00000021172	patz1	100	56.719	ENSMFAG00000040968	PATZ1	100	57.143	Macaca_fascicularis
ENSMALG00000021172	patz1	100	56.719	ENSMNEG00000037588	PATZ1	100	57.143	Macaca_nemestrina
ENSMALG00000021172	patz1	100	56.577	ENSMLEG00000030938	PATZ1	100	56.860	Mandrillus_leucophaeus
ENSMALG00000021172	patz1	100	89.127	ENSMAMG00000023652	patz1	100	89.127	Mastacembelus_armatus
ENSMALG00000021172	patz1	88	53.923	ENSMGAG00000008439	PATZ1	100	53.923	Meleagris_gallopavo
ENSMALG00000021172	patz1	100	56.860	ENSMAUG00000004129	Patz1	100	56.860	Mesocricetus_auratus
ENSMALG00000021172	patz1	100	56.719	ENSMICG00000005430	PATZ1	100	57.001	Microcebus_murinus
ENSMALG00000021172	patz1	100	56.941	ENSMOCG00000014488	Patz1	100	56.941	Microtus_ochrogaster
ENSMALG00000021172	patz1	100	75.429	ENSMMOG00000021679	patz1	100	78.476	Mola_mola
ENSMALG00000021172	patz1	100	57.001	MGP_CAROLIEiJ_G0016007	Patz1	100	57.001	Mus_caroli
ENSMALG00000021172	patz1	100	57.001	ENSMUSG00000020453	Patz1	100	57.001	Mus_musculus
ENSMALG00000021172	patz1	100	57.001	MGP_PahariEiJ_G0016884	Patz1	100	57.001	Mus_pahari
ENSMALG00000021172	patz1	100	57.001	MGP_SPRETEiJ_G0016846	Patz1	100	57.001	Mus_spretus
ENSMALG00000021172	patz1	100	56.780	ENSMLUG00000009942	PATZ1	100	57.143	Myotis_lucifugus
ENSMALG00000021172	patz1	100	56.860	ENSNGAG00000010268	Patz1	100	56.860	Nannospalax_galili
ENSMALG00000021172	patz1	100	88.606	ENSNBRG00000016032	patz1	100	88.606	Neolamprologus_brichardi
ENSMALG00000021172	patz1	65	61.086	ENSMEUG00000016293	PATZ1	91	61.086	Notamacropus_eugenii
ENSMALG00000021172	patz1	100	57.224	ENSODEG00000003589	PATZ1	100	57.224	Octodon_degus
ENSMALG00000021172	patz1	100	87.156	ENSONIG00000004248	patz1	100	87.156	Oreochromis_niloticus
ENSMALG00000021172	patz1	100	56.899	ENSOANG00000014654	PATZ1	100	57.468	Ornithorhynchus_anatinus
ENSMALG00000021172	patz1	100	80.335	ENSORLG00020010937	patz1	100	80.335	Oryzias_latipes_hni
ENSMALG00000021172	patz1	100	80.734	ENSORLG00015007396	patz1	100	80.734	Oryzias_latipes_hsok
ENSMALG00000021172	patz1	100	82.158	ENSOMEG00000006636	patz1	100	81.623	Oryzias_melastigma
ENSMALG00000021172	patz1	100	56.860	ENSOGAG00000027905	PATZ1	100	57.143	Otolemur_garnettii
ENSMALG00000021172	patz1	100	56.577	ENSPPAG00000033227	PATZ1	100	56.860	Pan_paniscus
ENSMALG00000021172	patz1	100	56.719	ENSPPRG00000001573	PATZ1	100	57.143	Panthera_pardus
ENSMALG00000021172	patz1	88	56.507	ENSPTIG00000007937	PATZ1	91	56.956	Panthera_tigris_altaica
ENSMALG00000021172	patz1	100	56.577	ENSPTRG00000014268	PATZ1	100	56.860	Pan_troglodytes
ENSMALG00000021172	patz1	100	56.577	ENSPANG00000006821	PATZ1	100	56.860	Papio_anubis
ENSMALG00000021172	patz1	100	69.667	ENSPKIG00000019584	patz1	100	69.667	Paramormyrops_kingsleyae
ENSMALG00000021172	patz1	71	57.493	ENSPSIG00000016553	-	85	59.733	Pelodiscus_sinensis
ENSMALG00000021172	patz1	67	62.141	ENSPSIG00000011562	-	100	62.141	Pelodiscus_sinensis
ENSMALG00000021172	patz1	100	76.029	ENSPMGG00000010196	patz1	100	76.029	Periophthalmus_magnuspinnatus
ENSMALG00000021172	patz1	100	57.143	ENSPEMG00000005321	Patz1	100	57.143	Peromyscus_maniculatus_bairdii
ENSMALG00000021172	patz1	100	84.580	ENSPLAG00000010425	patz1	100	84.580	Poecilia_latipinna
ENSMALG00000021172	patz1	100	84.709	ENSPMEG00000000255	patz1	100	84.709	Poecilia_mexicana
ENSMALG00000021172	patz1	100	80.086	ENSPREG00000002440	patz1	100	80.086	Poecilia_reticulata
ENSMALG00000021172	patz1	100	56.577	ENSPPYG00000011732	PATZ1	100	56.860	Pongo_abelii
ENSMALG00000021172	patz1	100	56.719	ENSPCOG00000019729	PATZ1	100	57.001	Propithecus_coquereli
ENSMALG00000021172	patz1	100	56.719	ENSPVAG00000001749	PATZ1	100	57.143	Pteropus_vampyrus
ENSMALG00000021172	patz1	100	87.577	ENSPNYG00000013542	patz1	100	87.577	Pundamilia_nyererei
ENSMALG00000021172	patz1	88	62.761	ENSPNAG00000017222	patz1	100	62.761	Pygocentrus_nattereri
ENSMALG00000021172	patz1	100	56.577	ENSRBIG00000044231	PATZ1	100	56.860	Rhinopithecus_bieti
ENSMALG00000021172	patz1	100	56.577	ENSRROG00000037155	PATZ1	100	56.860	Rhinopithecus_roxellana
ENSMALG00000021172	patz1	100	56.657	ENSSBOG00000003894	PATZ1	100	56.941	Saimiri_boliviensis_boliviensis
ENSMALG00000021172	patz1	83	96.154	ENSSFOG00015013244	patz1	78	96.154	Scleropages_formosus
ENSMALG00000021172	patz1	56	71.863	ENSSMAG00000020844	patz1	72	86.235	Scophthalmus_maximus
ENSMALG00000021172	patz1	99	56.063	ENSSPUG00000015298	PATZ1	97	56.348	Sphenodon_punctatus
ENSMALG00000021172	patz1	88	56.645	ENSSSCG00000010027	PATZ1	100	57.143	Sus_scrofa
ENSMALG00000021172	patz1	100	82.734	ENSTRUG00000015366	patz1	100	82.734	Takifugu_rubripes
ENSMALG00000021172	patz1	100	56.577	ENSTTRG00000010279	PATZ1	100	57.001	Tursiops_truncatus
ENSMALG00000021172	patz1	100	55.835	ENSUAMG00000015014	PATZ1	100	56.278	Ursus_americanus
ENSMALG00000021172	patz1	100	57.143	ENSXETG00000004190	patz1	100	57.143	Xenopus_tropicalis
ENSMALG00000021172	patz1	100	85.168	ENSXMAG00000015531	patz1	100	85.168	Xiphophorus_maculatus