EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000021194 (Gene tree)
Gene ID: 109973414
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 4552 bases
Position: chrKV884978.1:605813-610364
Accession: 109973414
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000030862	RRM_1	PF00076.22	5.5e-33	1	2
ENSMALP00000030862	RRM_1	PF00076.22	5.5e-33	2	2
ENSMALP00000030862	RRM_3	PF08777.11	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000031408	-	804	XM_020622975	ENSMALP00000030862	267 (aa)	XP_020478631	-

Gene Model

Click here to download ENSMALG00000021194's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG
malb05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000021194's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000021194	srsf5a	64	65.969	ENSMALG00000021875	srsf5b	84	69.767
ENSMALG00000021194	srsf5a	62	68.047	ENSMALG00000013392	srsf4	65	67.647
ENSMALG00000021194	srsf5a	63	41.989	ENSMALG00000011678	srsf9	73	44.444
ENSMALG00000021194	srsf5a	58	40.373	ENSMALG00000007763	-	64	42.857
ENSMALG00000021194	srsf5a	58	46.061	ENSMALG00000017129	-	64	46.061

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000021194	srsf5a	100	80.405	ENSAPOG00000017395	srsf5a	100	82.095	Acanthochromis_polyacanthus
ENSMALG00000021194	srsf5a	90	83.534	ENSACIG00000011892	srsf5a	100	82.971	Amphilophus_citrinellus
ENSMALG00000021194	srsf5a	79	82.203	ENSAOCG00000014967	srsf5a	100	82.373	Amphiprion_ocellaris
ENSMALG00000021194	srsf5a	79	82.203	ENSAPEG00000009297	srsf5a	80	84.681	Amphiprion_percula
ENSMALG00000021194	srsf5a	100	81.787	ENSATEG00000000198	srsf5a	100	83.505	Anabas_testudineus
ENSMALG00000021194	srsf5a	63	76.404	ENSAPLG00000002469	-	70	76.404	Anas_platyrhynchos
ENSMALG00000021194	srsf5a	63	76.966	ENSACAG00000029015	-	68	78.090	Anolis_carolinensis
ENSMALG00000021194	srsf5a	79	80.335	ENSACLG00000027166	srsf5a	100	80.743	Astatotilapia_calliptera
ENSMALG00000021194	srsf5a	100	62.898	ENSAMXG00000030476	srsf5a	67	80.541	Astyanax_mexicanus
ENSMALG00000021194	srsf5a	63	74.457	ENSCPBG00000021518	-	70	75.543	Chrysemys_picta_bellii
ENSMALG00000021194	srsf5a	63	51.220	ENSCSAVG00000011376	-	78	54.082	Ciona_savignyi
ENSMALG00000021194	srsf5a	79	79.339	ENSCSEG00000008109	srsf5a	77	80.579	Cynoglossus_semilaevis
ENSMALG00000021194	srsf5a	77	74.583	ENSCVAG00000016982	srsf5a	97	69.403	Cyprinodon_variegatus
ENSMALG00000021194	srsf5a	100	64.164	ENSDARG00000029818	srsf5a	100	75.188	Danio_rerio
ENSMALG00000021194	srsf5a	63	76.684	ENSELUG00000020439	srsf5a	62	77.720	Esox_lucius
ENSMALG00000021194	srsf5a	63	76.705	ENSFALG00000005098	-	64	77.273	Ficedula_albicollis
ENSMALG00000021194	srsf5a	81	71.705	ENSFHEG00000003955	srsf5a	97	66.207	Fundulus_heteroclitus
ENSMALG00000021194	srsf5a	63	85.876	ENSGMOG00000000869	srsf5a	94	86.441	Gadus_morhua
ENSMALG00000021194	srsf5a	63	77.143	ENSGALG00000033259	SRSF5A	63	77.714	Gallus_gallus
ENSMALG00000021194	srsf5a	81	76.419	ENSGAFG00000018237	srsf5a	74	67.111	Gambusia_affinis
ENSMALG00000021194	srsf5a	63	89.326	ENSGACG00000011761	srsf5a	70	88.202	Gasterosteus_aculeatus
ENSMALG00000021194	srsf5a	63	74.457	ENSGAGG00000007312	-	70	75.543	Gopherus_agassizii
ENSMALG00000021194	srsf5a	79	80.252	ENSHBUG00000014048	srsf5a	100	80.678	Haplochromis_burtoni
ENSMALG00000021194	srsf5a	63	83.871	ENSHCOG00000017557	srsf5a	62	84.409	Hippocampus_comes
ENSMALG00000021194	srsf5a	100	66.782	ENSIPUG00000003439	srsf5a	69	78.421	Ictalurus_punctatus
ENSMALG00000021194	srsf5a	80	78.205	ENSKMAG00000014937	srsf5a	72	70.513	Kryptolebias_marmoratus
ENSMALG00000021194	srsf5a	63	80.000	ENSLBEG00000017153	srsf5a	74	80.000	Labrus_bergylta
ENSMALG00000021194	srsf5a	63	80.000	ENSLACG00000017874	-	70	80.556	Latimeria_chalumnae
ENSMALG00000021194	srsf5a	63	79.459	ENSLOCG00000014075	srsf5a	81	72.951	Lepisosteus_oculatus
ENSMALG00000021194	srsf5a	90	86.770	ENSMAMG00000000192	srsf5a	93	87.549	Mastacembelus_armatus
ENSMALG00000021194	srsf5a	79	80.672	ENSMZEG00005010485	srsf5a	100	81.017	Maylandia_zebra
ENSMALG00000021194	srsf5a	68	75.132	ENSMGAG00000011888	-	96	78.344	Meleagris_gallopavo
ENSMALG00000021194	srsf5a	79	82.969	ENSMMOG00000009793	srsf5a	100	82.993	Mola_mola
ENSMALG00000021194	srsf5a	79	81.013	ENSNBRG00000000771	srsf5a	100	81.293	Neolamprologus_brichardi
ENSMALG00000021194	srsf5a	79	81.013	ENSONIG00000019583	srsf5a	100	81.293	Oreochromis_niloticus
ENSMALG00000021194	srsf5a	79	81.333	ENSORLG00000009268	srsf5a	93	72.857	Oryzias_latipes
ENSMALG00000021194	srsf5a	79	81.333	ENSORLG00020003281	srsf5	92	71.875	Oryzias_latipes_hni
ENSMALG00000021194	srsf5a	79	81.333	ENSORLG00015023075	srsf5	92	71.875	Oryzias_latipes_hsok
ENSMALG00000021194	srsf5a	79	83.482	ENSOMEG00000000628	srsf5a	100	72.598	Oryzias_melastigma
ENSMALG00000021194	srsf5a	63	81.183	ENSPKIG00000002054	srsf5a	68	81.720	Paramormyrops_kingsleyae
ENSMALG00000021194	srsf5a	63	78.531	ENSPSIG00000008238	-	69	77.966	Pelodiscus_sinensis
ENSMALG00000021194	srsf5a	92	61.754	ENSPMGG00000020125	srsf5a	72	68.595	Periophthalmus_magnuspinnatus
ENSMALG00000021194	srsf5a	81	73.333	ENSPFOG00000022993	srsf5a	90	70.035	Poecilia_formosa
ENSMALG00000021194	srsf5a	81	73.228	ENSPLAG00000005508	srsf5a	89	69.930	Poecilia_latipinna
ENSMALG00000021194	srsf5a	90	68.456	ENSPMEG00000016339	srsf5a	100	63.580	Poecilia_mexicana
ENSMALG00000021194	srsf5a	90	68.814	ENSPREG00000018091	srsf5a	79	65.200	Poecilia_reticulata
ENSMALG00000021194	srsf5a	79	80.672	ENSPNYG00000021245	srsf5a	100	81.017	Pundamilia_nyererei
ENSMALG00000021194	srsf5a	90	61.719	ENSPNAG00000021333	srsf5a	66	80.435	Pygocentrus_nattereri
ENSMALG00000021194	srsf5a	95	58.131	ENSSFOG00015008377	srsf5	66	81.818	Scleropages_formosus
ENSMALG00000021194	srsf5a	100	75.081	ENSSMAG00000010899	srsf5a	100	76.052	Scophthalmus_maximus
ENSMALG00000021194	srsf5a	100	82.292	ENSSDUG00000006103	srsf5a	100	84.375	Seriola_dumerili
ENSMALG00000021194	srsf5a	90	81.679	ENSSLDG00000004146	srsf5a	100	84.138	Seriola_lalandi_dorsalis
ENSMALG00000021194	srsf5a	63	74.719	ENSSPUG00000002052	-	68	76.966	Sphenodon_punctatus
ENSMALG00000021194	srsf5a	79	83.190	ENSSPAG00000002821	srsf5a	100	83.849	Stegastes_partitus
ENSMALG00000021194	srsf5a	63	77.273	ENSTGUG00000011492	-	68	77.273	Taeniopygia_guttata
ENSMALG00000021194	srsf5a	100	78.716	ENSTRUG00000022908	srsf5a	100	80.068	Takifugu_rubripes
ENSMALG00000021194	srsf5a	63	76.064	ENSXETG00000017937	srsf5a	72	75.532	Xenopus_tropicalis
ENSMALG00000021194	srsf5a	90	71.731	ENSXCOG00000015338	srsf5a	79	77.500	Xiphophorus_couchianus
ENSMALG00000021194	srsf5a	90	69.048	ENSXMAG00000012823	srsf5a	79	64.940	Xiphophorus_maculatus