EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMALG00000021622 (Gene tree)
Gene ID
109964645
Gene Symbol
pabpc1l
Alias
fi20g03|wu:fi20g03|zgc:55855
Full Name
embryonic polyadenylate-binding protein-like
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Minus strand
Length
13062 bases
Position
chrKV884779.1:24990-38051
Accession
109964645
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000031340PABPPF00658.184.4e-2911
ENSMALP00000031356PABPPF00658.185.4e-2511
ENSMALP00000031340RRM_5PF13893.66e-0811
ENSMALP00000031356RRM_5PF13893.61.3e-0711
ENSMALP00000031356RRM_1PF00076.221.8e-8814
ENSMALP00000031356RRM_1PF00076.221.8e-8824
ENSMALP00000031356RRM_1PF00076.221.8e-8834
ENSMALP00000031356RRM_1PF00076.221.8e-8844
ENSMALP00000031340RRM_1PF00076.221.8e-8814
ENSMALP00000031340RRM_1PF00076.221.8e-8824
ENSMALP00000031340RRM_1PF00076.221.8e-8834
ENSMALP00000031340RRM_1PF00076.221.8e-8844
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000031886-5085XM_020608101ENSMALP00000031340656 (aa)XP_020463757UPI0009B36FBD
ENSMALT00000031902-1815-ENSMALP00000031356604 (aa)--
Gene Model
Click here to download ENSMALG00000021622's gene model file
Pathways
Pathway IDPathway NameSource
malb03013RNA transportKEGG
malb03015mRNA surveillance pathwayKEGG
malb03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000021622's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMALG00000021622pabpc1l10068.233ENSMALG00000013020-9668.233
ENSMALG00000021622pabpc1l5034.884ENSMALG00000011641celf3a7434.884
ENSMALG00000021622pabpc1l6330.000ENSMALG00000003411elavl28230.000
ENSMALG00000021622pabpc1l5432.215ENSMALG00000022126rbm455932.215
ENSMALG00000021622pabpc1l5933.696ENSMALG00000021265-9833.696
ENSMALG00000021622pabpc1l10066.612ENSMALG00000006066pabpc1b9566.612
ENSMALG00000021622pabpc1l6039.634ENSMALG00000006174sf3b45539.773
ENSMALG00000021622pabpc1l6130.464ENSMALG00000016432elavl48430.464
ENSMALG00000021622pabpc1l10065.635ENSMALG00000011017pabpc49566.124
ENSMALG00000021622pabpc1l5134.884ENSMALG00000007438celf3b6234.884
ENSMALG00000021622pabpc1l5937.079ENSMALG00000010070elavl1a7837.079
ENSMALG00000021622pabpc1l7231.646ENSMALG00000012647rbm196531.646
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000021622pabpc1l10066.234ENSG00000101104PABPC1L9875.617Homo_sapiens
ENSMALG00000021622pabpc1l10082.450ENSAPOG00000010842pabpc1l9782.450Acanthochromis_polyacanthus
ENSMALG00000021622pabpc1l10062.715ENSAMEG00000004099PABPC1L9861.994Ailuropoda_melanoleuca
ENSMALG00000021622pabpc1l9993.120ENSACIG00000021004-9693.120Amphilophus_citrinellus
ENSMALG00000021622pabpc1l10085.173ENSAOCG00000006167-9785.173Amphiprion_ocellaris
ENSMALG00000021622pabpc1l10085.986ENSAPEG00000010558-9987.615Amphiprion_percula
ENSMALG00000021622pabpc1l10089.456ENSATEG00000007428pabpc1l9789.786Anabas_testudineus
ENSMALG00000021622pabpc1l9970.462ENSAPLG00000008415PABPC1L9770.261Anas_platyrhynchos
ENSMALG00000021622pabpc1l10073.856ENSACAG00000011841PABPC1L9673.856Anolis_carolinensis
ENSMALG00000021622pabpc1l10065.964ENSANAG00000026826PABPC1L9765.964Aotus_nancymaae
ENSMALG00000021622pabpc1l10089.292ENSACLG00000024791pabpc1l9987.557Astatotilapia_calliptera
ENSMALG00000021622pabpc1l10078.818ENSAMXG00000013552pabpc1l9977.204Astyanax_mexicanus
ENSMALG00000021622pabpc1l6564.419ENSBTAG00000016849PABPC1L8263.838Bos_taurus
ENSMALG00000021622pabpc1l6485.119ENSBTAG00000055300-10085.119Bos_taurus
ENSMALG00000021622pabpc1l10066.126ENSCJAG00000017628PABPC1L9766.126Callithrix_jacchus
ENSMALG00000021622pabpc1l6177.586ENSCJAG00000038506-10077.586Callithrix_jacchus
ENSMALG00000021622pabpc1l10062.696ENSCAFG00000009573PABPC1L9862.696Canis_familiaris
ENSMALG00000021622pabpc1l10067.875ENSCAFG00020013828PABPC1L9767.875Canis_lupus_dingo
ENSMALG00000021622pabpc1l10068.204ENSCHIG00000025759PABPC1L9068.204Capra_hircus
ENSMALG00000021622pabpc1l10066.126ENSTSYG00000006645PABPC1L9766.126Carlito_syrichta
ENSMALG00000021622pabpc1l9959.963ENSCAPG00000014519PABPC1L9957.411Cavia_aperea
ENSMALG00000021622pabpc1l10062.848ENSCPOG00000013633PABPC1L9762.848Cavia_porcellus
ENSMALG00000021622pabpc1l10065.478ENSCCAG00000023338PABPC1L9766.126Cebus_capucinus
ENSMALG00000021622pabpc1l10066.558ENSCATG00000034065PABPC1L9766.937Cercocebus_atys
ENSMALG00000021622pabpc1l10061.538ENSCLAG00000005298PABPC1L9762.193Chinchilla_lanigera
ENSMALG00000021622pabpc1l10066.721ENSCSAG00000014242PABPC1L9767.099Chlorocebus_sabaeus
ENSMALG00000021622pabpc1l5786.555ENSCPBG00000007810-9186.555Chrysemys_picta_bellii
ENSMALG00000021622pabpc1l7378.231ENSCPBG00000017755-9978.231Chrysemys_picta_bellii
ENSMALG00000021622pabpc1l9849.695ENSCING00000002796-9748.689Ciona_intestinalis
ENSMALG00000021622pabpc1l10056.752ENSCSAVG00000003102-10081.879Ciona_savignyi
ENSMALG00000021622pabpc1l10069.543ENSCSAVG00000004246-9659.217Ciona_savignyi
ENSMALG00000021622pabpc1l10063.520ENSCANG00000037530PABPC1L9763.738Colobus_angolensis_palliatus
ENSMALG00000021622pabpc1l10060.097ENSCGRG00001021938Pabpc1l9760.097Cricetulus_griseus_chok1gshd
ENSMALG00000021622pabpc1l10060.097ENSCGRG00000007946Pabpc1l9760.097Cricetulus_griseus_crigri
ENSMALG00000021622pabpc1l9975.581ENSCSEG00000021295pabpc1l9675.581Cynoglossus_semilaevis
ENSMALG00000021622pabpc1l10085.667ENSCVAG00000015943-9993.893Cyprinodon_variegatus
ENSMALG00000021622pabpc1l10079.077ENSDARG00000002597pabpc1l8892.308Danio_rerio
ENSMALG00000021622pabpc1l10067.049ENSDNOG00000048450PABPC1L9767.049Dasypus_novemcinctus
ENSMALG00000021622pabpc1l10064.860ENSDORG00000001067Pabpc1l9764.860Dipodomys_ordii
ENSMALG00000021622pabpc1l9674.797ENSETEG00000009969PABPC1L6974.797Echinops_telfairi
ENSMALG00000021622pabpc1l5273.418ENSEASG00005023407-6473.418Equus_asinus_asinus
ENSMALG00000021622pabpc1l6482.738ENSEASG00005023408-10082.738Equus_asinus_asinus
ENSMALG00000021622pabpc1l6864.807ENSECAG00000040139-8464.807Equus_caballus
ENSMALG00000021622pabpc1l10065.353ENSEEUG00000005978PABPC1L9765.353Erinaceus_europaeus
ENSMALG00000021622pabpc1l10080.984ENSELUG00000001811pabpc1l9981.075Esox_lucius
ENSMALG00000021622pabpc1l10067.875ENSFCAG00000011692PABPC1L9767.875Felis_catus
ENSMALG00000021622pabpc1l8870.370ENSFALG00000005372PABPC1L9368.829Ficedula_albicollis
ENSMALG00000021622pabpc1l10062.171ENSFDAG00000008291PABPC1L9959.726Fukomys_damarensis
ENSMALG00000021622pabpc1l10086.755ENSFHEG00000003398pabpc1l9984.802Fundulus_heteroclitus
ENSMALG00000021622pabpc1l10081.983ENSGMOG00000004437pabpc1l9681.983Gadus_morhua
ENSMALG00000021622pabpc1l9675.410ENSGALG00000004123PABPC1L9978.622Gallus_gallus
ENSMALG00000021622pabpc1l9984.370ENSGAFG00000021057pabpc1l9984.370Gambusia_affinis
ENSMALG00000021622pabpc1l10086.842ENSGACG00000002792pabpc1l9786.842Gasterosteus_aculeatus
ENSMALG00000021622pabpc1l10072.638ENSGAGG00000000589PABPC1L9476.941Gopherus_agassizii
ENSMALG00000021622pabpc1l10066.234ENSGGOG00000004584PABPC1L9766.451Gorilla_gorilla
ENSMALG00000021622pabpc1l10089.127ENSHBUG00000006134pabpc1l9987.634Haplochromis_burtoni
ENSMALG00000021622pabpc1l10063.339ENSHGLG00000008434PABPC1L9763.339Heterocephalus_glaber_female
ENSMALG00000021622pabpc1l6083.708ENSHGLG00100019506-10083.929Heterocephalus_glaber_male
ENSMALG00000021622pabpc1l10063.339ENSHGLG00100012151PABPC1L9763.339Heterocephalus_glaber_male
ENSMALG00000021622pabpc1l9985.567ENSHCOG00000009270pabpc1l9785.567Hippocampus_comes
ENSMALG00000021622pabpc1l10077.011ENSIPUG00000012602pabpc1l9975.152Ictalurus_punctatus
ENSMALG00000021622pabpc1l6162.069ENSIPUG00000006780-8562.069Ictalurus_punctatus
ENSMALG00000021622pabpc1l6062.069ENSIPUG00000006760-8862.069Ictalurus_punctatus
ENSMALG00000021622pabpc1l10066.941ENSSTOG00000003739PABPC1L9766.941Ictidomys_tridecemlineatus
ENSMALG00000021622pabpc1l9952.007ENSJJAG00000022406Pabpc1l9948.872Jaculus_jaculus
ENSMALG00000021622pabpc1l10085.950ENSKMAG00000016847pabpc1l9885.000Kryptolebias_marmoratus
ENSMALG00000021622pabpc1l10088.797ENSLBEG00000010084pabpc1l9987.481Labrus_bergylta
ENSMALG00000021622pabpc1l10071.129ENSLACG00000005762PABPC1L9574.952Latimeria_chalumnae
ENSMALG00000021622pabpc1l10079.672ENSLOCG00000007519pabpc1l9679.672Lepisosteus_oculatus
ENSMALG00000021622pabpc1l10065.217ENSLAFG00000003553PABPC1L9865.217Loxodonta_africana
ENSMALG00000021622pabpc1l10066.558ENSMFAG00000040365PABPC1L9766.937Macaca_fascicularis
ENSMALG00000021622pabpc1l10065.909ENSMNEG00000032298PABPC1L9766.613Macaca_nemestrina
ENSMALG00000021622pabpc1l10066.558ENSMLEG00000043139PABPC1L9766.937Mandrillus_leucophaeus
ENSMALG00000021622pabpc1l10092.219ENSMAMG00000011854pabpc1l9792.219Mastacembelus_armatus
ENSMALG00000021622pabpc1l10089.292ENSMZEG00005023713pabpc1l9987.557Maylandia_zebra
ENSMALG00000021622pabpc1l10071.382ENSMGAG00000003674PABPC1L9671.546Meleagris_gallopavo
ENSMALG00000021622pabpc1l10059.180ENSMOCG00000013186Pabpc1l9759.180Microtus_ochrogaster
ENSMALG00000021622pabpc1l10087.603ENSMMOG00000020574-9787.603Mola_mola
ENSMALG00000021622pabpc1l10068.679ENSMODG00000016198PABPC1L9968.679Monodelphis_domestica
ENSMALG00000021622pabpc1l10059.807MGP_CAROLIEiJ_G0024627Pabpc1l9957.895Mus_caroli
ENSMALG00000021622pabpc1l10059.807ENSMUSG00000054582Pabpc1l9957.895Mus_musculus
ENSMALG00000021622pabpc1l10060.292MGP_PahariEiJ_G0026071Pabpc1l9760.292Mus_pahari
ENSMALG00000021622pabpc1l10059.807MGP_SPRETEiJ_G0025549Pabpc1l9957.895Mus_spretus
ENSMALG00000021622pabpc1l10068.361ENSMPUG00000017646PABPC1L9768.361Mustela_putorius_furo
ENSMALG00000021622pabpc1l10064.943ENSMLUG00000006324PABPC1L9664.943Myotis_lucifugus
ENSMALG00000021622pabpc1l10061.576ENSNGAG00000010458Pabpc1l9761.576Nannospalax_galili
ENSMALG00000021622pabpc1l9991.807ENSNBRG00000016633pabpc1l9691.807Neolamprologus_brichardi
ENSMALG00000021622pabpc1l9363.345ENSMEUG00000007905-8963.345Notamacropus_eugenii
ENSMALG00000021622pabpc1l10065.260ENSOPRG00000011846PABPC1L9765.260Ochotona_princeps
ENSMALG00000021622pabpc1l5977.500ENSODEG00000002920-9777.500Octodon_degus
ENSMALG00000021622pabpc1l9661.102ENSODEG00000015482PABPC1L9661.102Octodon_degus
ENSMALG00000021622pabpc1l10089.292ENSONIG00000017314pabpc1l9789.292Oreochromis_niloticus
ENSMALG00000021622pabpc1l9360.317ENSOANG00000015793-10060.317Ornithorhynchus_anatinus
ENSMALG00000021622pabpc1l10063.679ENSOCUG00000003005PABPC1L9863.679Oryctolagus_cuniculus
ENSMALG00000021622pabpc1l9987.028ENSORLG00000010322pabpc1l9687.028Oryzias_latipes
ENSMALG00000021622pabpc1l9987.028ENSORLG00020021193pabpc1l9687.028Oryzias_latipes_hni
ENSMALG00000021622pabpc1l9987.028ENSORLG00015017018pabpc1l9687.028Oryzias_latipes_hsok
ENSMALG00000021622pabpc1l9982.901ENSOMEG00000010789pabpc1l9982.901Oryzias_melastigma
ENSMALG00000021622pabpc1l10066.883ENSOGAG00000032999PABPC1L9766.883Otolemur_garnettii
ENSMALG00000021622pabpc1l10068.040ENSOARG00000004578PABPC1L9768.040Ovis_aries
ENSMALG00000021622pabpc1l10066.396ENSPPAG00000039677PABPC1L9766.613Pan_paniscus
ENSMALG00000021622pabpc1l6866.358ENSPPRG00000019327-9866.358Panthera_pardus
ENSMALG00000021622pabpc1l9967.720ENSPTIG00000006524PABPC1L9767.720Panthera_tigris_altaica
ENSMALG00000021622pabpc1l6475.926ENSPTRG00000013531PABPC1L9875.926Pan_troglodytes
ENSMALG00000021622pabpc1l10066.558ENSPANG00000018788PABPC1L9766.937Papio_anubis
ENSMALG00000021622pabpc1l10078.418ENSPKIG00000007322pabpc1l9778.418Paramormyrops_kingsleyae
ENSMALG00000021622pabpc1l5480.153ENSPKIG00000016810-9380.153Paramormyrops_kingsleyae
ENSMALG00000021622pabpc1l6980.096ENSPSIG00000013289PABPC1L9980.096Pelodiscus_sinensis
ENSMALG00000021622pabpc1l6493.333ENSPMGG00000023117pabpc1l9993.333Periophthalmus_magnuspinnatus
ENSMALG00000021622pabpc1l5885.641ENSPMGG00000023121-9185.641Periophthalmus_magnuspinnatus
ENSMALG00000021622pabpc1l10059.837ENSPEMG00000020671Pabpc1l9759.935Peromyscus_maniculatus_bairdii
ENSMALG00000021622pabpc1l10087.150ENSPFOG00000013241pabpc1l9787.150Poecilia_formosa
ENSMALG00000021622pabpc1l5495.385ENSPLAG00000023686-9295.385Poecilia_latipinna
ENSMALG00000021622pabpc1l10086.820ENSPLAG00000017490-9984.977Poecilia_latipinna
ENSMALG00000021622pabpc1l10087.273ENSPMEG00000007677pabpc1l9787.273Poecilia_mexicana
ENSMALG00000021622pabpc1l5495.385ENSPMEG00000009185-8895.385Poecilia_mexicana
ENSMALG00000021622pabpc1l6892.944ENSPREG00000015886pabpc1l9992.944Poecilia_reticulata
ENSMALG00000021622pabpc1l10066.396ENSPPYG00000011042PABPC1L9766.613Pongo_abelii
ENSMALG00000021622pabpc1l6284.375ENSPCAG00000011787-7584.375Procavia_capensis
ENSMALG00000021622pabpc1l10066.721ENSPCOG00000020630PABPC1L9766.721Propithecus_coquereli
ENSMALG00000021622pabpc1l10065.905ENSPVAG00000012663PABPC1L9765.905Pteropus_vampyrus
ENSMALG00000021622pabpc1l9992.048ENSPNYG00000004101pabpc1l9692.048Pundamilia_nyererei
ENSMALG00000021622pabpc1l10072.039ENSPNAG00000021248pabpc1l9970.517Pygocentrus_nattereri
ENSMALG00000021622pabpc1l9957.418ENSRNOG00000012750Pabpc1l9760.420Rattus_norvegicus
ENSMALG00000021622pabpc1l10066.558ENSRBIG00000035381PABPC1L9766.775Rhinopithecus_bieti
ENSMALG00000021622pabpc1l10066.396ENSRROG00000044498PABPC1L9766.613Rhinopithecus_roxellana
ENSMALG00000021622pabpc1l10065.964ENSSBOG00000009532-9765.964Saimiri_boliviensis_boliviensis
ENSMALG00000021622pabpc1l9964.167ENSSHAG00000011446PABPC1L9764.167Sarcophilus_harrisii
ENSMALG00000021622pabpc1l10078.125ENSSFOG00015017304pabpc1l9778.125Scleropages_formosus
ENSMALG00000021622pabpc1l10089.901ENSSMAG00000010516pabpc1l9896.899Scophthalmus_maximus
ENSMALG00000021622pabpc1l10090.280ENSSDUG00000014743pabpc1l9990.076Seriola_dumerili
ENSMALG00000021622pabpc1l9993.735ENSSLDG00000006981pabpc1l9891.781Seriola_lalandi_dorsalis
ENSMALG00000021622pabpc1l10072.549ENSSPUG00000004233PABPC1L9672.549Sphenodon_punctatus
ENSMALG00000021622pabpc1l10075.828ENSSPAG00000017137pabpc1l9775.828Stegastes_partitus
ENSMALG00000021622pabpc1l10066.503ENSSSCG00000007382PABPC1L9766.503Sus_scrofa
ENSMALG00000021622pabpc1l10070.257ENSTGUG00000005114PABPC1L9770.257Taeniopygia_guttata
ENSMALG00000021622pabpc1l10086.799ENSTRUG00000011085pabpc1l9786.799Takifugu_rubripes
ENSMALG00000021622pabpc1l10085.338ENSTNIG00000017903pabpc1l9685.338Tetraodon_nigroviridis
ENSMALG00000021622pabpc1l9975.685ENSTBEG00000002851PABPC1L7775.685Tupaia_belangeri
ENSMALG00000021622pabpc1l9765.662ENSTTRG00000007618PABPC1L10066.069Tursiops_truncatus
ENSMALG00000021622pabpc1l10065.182ENSUAMG00000017682PABPC1L9665.182Ursus_americanus
ENSMALG00000021622pabpc1l6872.423ENSUMAG00000025436PABPC1L9272.423Ursus_maritimus
ENSMALG00000021622pabpc1l9973.518ENSVVUG00000018939PABPC1L9573.518Vulpes_vulpes
ENSMALG00000021622pabpc1l10068.954ENSXETG00000022831pabpc1l9668.954Xenopus_tropicalis
ENSMALG00000021622pabpc1l9989.952ENSXCOG00000005459pabpc1l9990.780Xiphophorus_couchianus
ENSMALG00000021622pabpc1l10085.997ENSXMAG00000017135pabpc1l9984.370Xiphophorus_maculatus

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