EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000021872 (Gene tree)
Gene ID: 109955440
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 8375 bases
Position: chrKV884702.1:4097132-4105506
Accession: 109955440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000031703	efThoc1	PF11957.8	4.1e-145	1	1
ENSMALP00000031724	efThoc1	PF11957.8	6.3e-127	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000032276	-	1821	-	ENSMALP00000031724	606 (aa)	-	-
ENSMALT00000032255	-	2255	XM_020591602	ENSMALP00000031703	654 (aa)	XP_020447258	UPI0009B31ECA

Gene Model

Click here to download ENSMALG00000021872's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03013	RNA transport	KEGG
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000021872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000021872	thoc1	99	72.965	ENSG00000079134	THOC1	99	79.044	Homo_sapiens
ENSMALG00000021872	thoc1	99	73.272	ENSAMEG00000006645	THOC1	98	73.272	Ailuropoda_melanoleuca
ENSMALG00000021872	thoc1	100	86.998	ENSACIG00000019392	thoc1	95	91.857	Amphilophus_citrinellus
ENSMALG00000021872	thoc1	100	87.768	ENSAOCG00000008391	thoc1	100	87.768	Amphiprion_ocellaris
ENSMALG00000021872	thoc1	100	93.578	ENSAPEG00000001093	thoc1	100	93.578	Amphiprion_percula
ENSMALG00000021872	thoc1	100	92.966	ENSATEG00000004783	thoc1	100	92.966	Anabas_testudineus
ENSMALG00000021872	thoc1	99	72.324	ENSAPLG00000016149	THOC1	98	72.324	Anas_platyrhynchos
ENSMALG00000021872	thoc1	99	73.425	ENSACAG00000008307	THOC1	96	72.811	Anolis_carolinensis
ENSMALG00000021872	thoc1	99	72.340	ENSANAG00000033200	THOC1	98	72.340	Aotus_nancymaae
ENSMALG00000021872	thoc1	100	91.896	ENSACLG00000016836	thoc1	100	91.896	Astatotilapia_calliptera
ENSMALG00000021872	thoc1	99	75.680	ENSAMXG00000014708	thoc1	98	77.671	Astyanax_mexicanus
ENSMALG00000021872	thoc1	99	73.579	ENSBTAG00000019215	THOC1	98	73.579	Bos_taurus
ENSMALG00000021872	thoc1	71	35.438	WBGene00020172	thoc-1	73	35.211	Caenorhabditis_elegans
ENSMALG00000021872	thoc1	99	73.118	ENSCJAG00000020450	THOC1	98	73.118	Callithrix_jacchus
ENSMALG00000021872	thoc1	99	73.425	ENSCAFG00000018324	THOC1	98	73.425	Canis_familiaris
ENSMALG00000021872	thoc1	99	73.425	ENSCAFG00020017894	THOC1	98	73.425	Canis_lupus_dingo
ENSMALG00000021872	thoc1	99	73.579	ENSCHIG00000015399	THOC1	98	75.118	Capra_hircus
ENSMALG00000021872	thoc1	99	72.965	ENSTSYG00000010585	THOC1	98	72.965	Carlito_syrichta
ENSMALG00000021872	thoc1	98	55.537	ENSCAPG00000016270	THOC1	97	51.863	Cavia_aperea
ENSMALG00000021872	thoc1	99	71.889	ENSCPOG00000000959	THOC1	98	71.889	Cavia_porcellus
ENSMALG00000021872	thoc1	99	73.118	ENSCCAG00000025766	THOC1	98	73.118	Cebus_capucinus
ENSMALG00000021872	thoc1	99	70.814	ENSCATG00000028180	THOC1	96	78.035	Cercocebus_atys
ENSMALG00000021872	thoc1	97	74.016	ENSCLAG00000009117	THOC1	99	74.016	Chinchilla_lanigera
ENSMALG00000021872	thoc1	99	73.118	ENSCSAG00000017631	THOC1	98	73.118	Chlorocebus_sabaeus
ENSMALG00000021872	thoc1	82	77.682	ENSCHOG00000010609	THOC1	77	78.008	Choloepus_hoffmanni
ENSMALG00000021872	thoc1	99	73.466	ENSCPBG00000027558	THOC1	99	73.466	Chrysemys_picta_bellii
ENSMALG00000021872	thoc1	74	47.316	ENSCING00000007663	-	98	46.869	Ciona_intestinalis
ENSMALG00000021872	thoc1	97	47.452	ENSCSAVG00000010649	-	100	47.634	Ciona_savignyi
ENSMALG00000021872	thoc1	99	72.965	ENSCANG00000034265	THOC1	96	78.655	Colobus_angolensis_palliatus
ENSMALG00000021872	thoc1	99	72.657	ENSCGRG00001016464	Thoc1	98	72.657	Cricetulus_griseus_chok1gshd
ENSMALG00000021872	thoc1	98	73.865	ENSCGRG00000010269	-	99	74.173	Cricetulus_griseus_crigri
ENSMALG00000021872	thoc1	91	58.596	ENSCGRG00000003390	-	97	60.171	Cricetulus_griseus_crigri
ENSMALG00000021872	thoc1	99	87.082	ENSCSEG00000012486	thoc1	99	88.141	Cynoglossus_semilaevis
ENSMALG00000021872	thoc1	100	88.838	ENSCVAG00000020600	thoc1	100	88.838	Cyprinodon_variegatus
ENSMALG00000021872	thoc1	100	83.053	ENSDARG00000088246	thoc1	99	83.180	Danio_rerio
ENSMALG00000021872	thoc1	99	73.077	ENSDNOG00000019217	THOC1	98	73.077	Dasypus_novemcinctus
ENSMALG00000021872	thoc1	97	69.921	ENSDORG00000008060	Thoc1	98	69.921	Dipodomys_ordii
ENSMALG00000021872	thoc1	98	37.122	FBgn0037382	Hpr1	73	42.569	Drosophila_melanogaster
ENSMALG00000021872	thoc1	90	55.857	ENSETEG00000004165	THOC1	98	55.857	Echinops_telfairi
ENSMALG00000021872	thoc1	96	60.331	ENSEBUG00000005998	thoc1	98	64.842	Eptatretus_burgeri
ENSMALG00000021872	thoc1	99	72.965	ENSEASG00005002549	THOC1	94	72.504	Equus_asinus_asinus
ENSMALG00000021872	thoc1	99	73.425	ENSECAG00000009267	THOC1	88	73.425	Equus_caballus
ENSMALG00000021872	thoc1	79	58.865	ENSEEUG00000012214	-	81	58.865	Erinaceus_europaeus
ENSMALG00000021872	thoc1	99	87.043	ENSELUG00000023277	thoc1	99	87.043	Esox_lucius
ENSMALG00000021872	thoc1	99	73.425	ENSFCAG00000022454	THOC1	85	73.425	Felis_catus
ENSMALG00000021872	thoc1	97	73.709	ENSFALG00000006205	THOC1	99	73.709	Ficedula_albicollis
ENSMALG00000021872	thoc1	98	73.406	ENSFDAG00000006842	THOC1	99	73.406	Fukomys_damarensis
ENSMALG00000021872	thoc1	100	90.520	ENSFHEG00000008841	thoc1	100	90.520	Fundulus_heteroclitus
ENSMALG00000021872	thoc1	99	87.883	ENSGMOG00000011486	thoc1	99	87.883	Gadus_morhua
ENSMALG00000021872	thoc1	99	72.699	ENSGALG00000014915	THOC1	99	71.818	Gallus_gallus
ENSMALG00000021872	thoc1	100	88.532	ENSGAFG00000021464	thoc1	100	88.532	Gambusia_affinis
ENSMALG00000021872	thoc1	100	90.520	ENSGACG00000017361	thoc1	100	90.520	Gasterosteus_aculeatus
ENSMALG00000021872	thoc1	99	73.507	ENSGAGG00000021230	-	97	73.507	Gopherus_agassizii
ENSMALG00000021872	thoc1	99	72.965	ENSGGOG00000003013	THOC1	98	72.965	Gorilla_gorilla
ENSMALG00000021872	thoc1	100	92.202	ENSHBUG00000009096	thoc1	100	92.202	Haplochromis_burtoni
ENSMALG00000021872	thoc1	73	67.016	ENSHGLG00000009264	-	98	71.892	Heterocephalus_glaber_female
ENSMALG00000021872	thoc1	99	72.965	ENSHGLG00000003712	-	98	72.965	Heterocephalus_glaber_female
ENSMALG00000021872	thoc1	72	68.852	ENSHGLG00100002225	-	97	72.515	Heterocephalus_glaber_male
ENSMALG00000021872	thoc1	99	73.118	ENSHGLG00100003570	THOC1	98	73.118	Heterocephalus_glaber_male
ENSMALG00000021872	thoc1	94	79.964	ENSIPUG00000005306	thoc1	99	78.871	Ictalurus_punctatus
ENSMALG00000021872	thoc1	99	72.965	ENSSTOG00000006484	THOC1	98	72.965	Ictidomys_tridecemlineatus
ENSMALG00000021872	thoc1	55	73.373	ENSJJAG00000014893	-	96	75.000	Jaculus_jaculus
ENSMALG00000021872	thoc1	99	90.505	ENSKMAG00000003904	thoc1	99	90.505	Kryptolebias_marmoratus
ENSMALG00000021872	thoc1	100	91.131	ENSLBEG00000020372	thoc1	98	91.131	Labrus_bergylta
ENSMALG00000021872	thoc1	99	73.006	ENSLACG00000014869	THOC1	99	72.699	Latimeria_chalumnae
ENSMALG00000021872	thoc1	100	82.953	ENSLOCG00000002097	thoc1	99	82.648	Lepisosteus_oculatus
ENSMALG00000021872	thoc1	99	73.118	ENSLAFG00000009585	THOC1	98	73.118	Loxodonta_africana
ENSMALG00000021872	thoc1	99	73.118	ENSMFAG00000041520	THOC1	98	73.118	Macaca_fascicularis
ENSMALG00000021872	thoc1	99	73.118	ENSMMUG00000004662	THOC1	98	73.118	Macaca_mulatta
ENSMALG00000021872	thoc1	99	73.118	ENSMNEG00000040177	THOC1	98	73.118	Macaca_nemestrina
ENSMALG00000021872	thoc1	99	73.118	ENSMLEG00000034201	THOC1	98	73.118	Mandrillus_leucophaeus
ENSMALG00000021872	thoc1	96	92.185	ENSMAMG00000016747	thoc1	100	92.185	Mastacembelus_armatus
ENSMALG00000021872	thoc1	100	91.896	ENSMZEG00005024609	thoc1	100	91.896	Maylandia_zebra
ENSMALG00000021872	thoc1	97	73.511	ENSMGAG00000009811	THOC1	99	73.511	Meleagris_gallopavo
ENSMALG00000021872	thoc1	99	72.197	ENSMAUG00000010272	Thoc1	98	72.197	Mesocricetus_auratus
ENSMALG00000021872	thoc1	99	73.272	ENSMICG00000027200	THOC1	98	73.272	Microcebus_murinus
ENSMALG00000021872	thoc1	99	71.429	ENSMOCG00000014536	-	85	71.429	Microtus_ochrogaster
ENSMALG00000021872	thoc1	99	62.980	ENSMOCG00000014924	-	95	62.673	Microtus_ochrogaster
ENSMALG00000021872	thoc1	93	93.137	ENSMMOG00000011772	thoc1	100	93.137	Mola_mola
ENSMALG00000021872	thoc1	99	72.451	ENSMODG00000021482	THOC1	98	72.451	Monodelphis_domestica
ENSMALG00000021872	thoc1	99	71.889	MGP_CAROLIEiJ_G0021989	Thoc1	98	71.889	Mus_caroli
ENSMALG00000021872	thoc1	99	72.043	ENSMUSG00000024287	Thoc1	98	72.043	Mus_musculus
ENSMALG00000021872	thoc1	99	72.043	MGP_PahariEiJ_G0018726	Thoc1	98	72.043	Mus_pahari
ENSMALG00000021872	thoc1	99	72.043	MGP_SPRETEiJ_G0022905	Thoc1	98	72.043	Mus_spretus
ENSMALG00000021872	thoc1	99	73.272	ENSMPUG00000005448	THOC1	98	73.272	Mustela_putorius_furo
ENSMALG00000021872	thoc1	90	67.450	ENSMLUG00000027965	-	99	67.785	Myotis_lucifugus
ENSMALG00000021872	thoc1	99	72.657	ENSMLUG00000004090	-	98	72.657	Myotis_lucifugus
ENSMALG00000021872	thoc1	61	66.416	ENSMLUG00000024912	-	100	66.416	Myotis_lucifugus
ENSMALG00000021872	thoc1	97	59.027	ENSNGAG00000008061	-	97	59.027	Nannospalax_galili
ENSMALG00000021872	thoc1	99	73.118	ENSNGAG00000001401	-	98	73.118	Nannospalax_galili
ENSMALG00000021872	thoc1	98	90.752	ENSNBRG00000005991	thoc1	97	90.752	Neolamprologus_brichardi
ENSMALG00000021872	thoc1	99	73.118	ENSNLEG00000006835	THOC1	98	73.118	Nomascus_leucogenys
ENSMALG00000021872	thoc1	89	77.944	ENSMEUG00000009756	THOC1	88	73.719	Notamacropus_eugenii
ENSMALG00000021872	thoc1	99	58.986	ENSOPRG00000001108	THOC1	98	58.986	Ochotona_princeps
ENSMALG00000021872	thoc1	99	67.127	ENSODEG00000006623	THOC1	98	67.127	Octodon_degus
ENSMALG00000021872	thoc1	100	92.202	ENSONIG00000009440	thoc1	98	92.320	Oreochromis_niloticus
ENSMALG00000021872	thoc1	99	73.118	ENSOCUG00000011601	THOC1	98	73.118	Oryctolagus_cuniculus
ENSMALG00000021872	thoc1	100	90.214	ENSORLG00000017629	thoc1	100	90.214	Oryzias_latipes
ENSMALG00000021872	thoc1	100	90.367	ENSORLG00020007567	thoc1	100	90.367	Oryzias_latipes_hni
ENSMALG00000021872	thoc1	100	90.367	ENSORLG00015007356	thoc1	100	90.367	Oryzias_latipes_hsok
ENSMALG00000021872	thoc1	100	89.602	ENSOMEG00000008200	thoc1	100	89.602	Oryzias_melastigma
ENSMALG00000021872	thoc1	99	70.046	ENSOGAG00000000470	THOC1	98	70.046	Otolemur_garnettii
ENSMALG00000021872	thoc1	97	75.078	ENSOARG00000009238	THOC1	96	75.078	Ovis_aries
ENSMALG00000021872	thoc1	99	73.118	ENSPPAG00000031812	THOC1	98	73.118	Pan_paniscus
ENSMALG00000021872	thoc1	99	72.811	ENSPPRG00000023794	THOC1	96	78.324	Panthera_pardus
ENSMALG00000021872	thoc1	99	72.811	ENSPTIG00000007469	THOC1	96	78.324	Panthera_tigris_altaica
ENSMALG00000021872	thoc1	99	72.188	ENSPTRG00000009816	THOC1	98	72.188	Pan_troglodytes
ENSMALG00000021872	thoc1	99	72.214	ENSPANG00000008665	THOC1	98	72.214	Papio_anubis
ENSMALG00000021872	thoc1	99	82.263	ENSPKIG00000005906	thoc1	99	82.875	Paramormyrops_kingsleyae
ENSMALG00000021872	thoc1	81	77.462	ENSPSIG00000007691	THOC1	97	77.462	Pelodiscus_sinensis
ENSMALG00000021872	thoc1	98	83.117	ENSPMGG00000008279	thoc1	95	86.224	Periophthalmus_magnuspinnatus
ENSMALG00000021872	thoc1	99	72.197	ENSPEMG00000021789	Thoc1	98	72.197	Peromyscus_maniculatus_bairdii
ENSMALG00000021872	thoc1	74	74.029	ENSPCIG00000026942	THOC1	97	74.029	Phascolarctos_cinereus
ENSMALG00000021872	thoc1	100	88.991	ENSPFOG00000011673	thoc1	100	88.991	Poecilia_formosa
ENSMALG00000021872	thoc1	100	89.144	ENSPLAG00000019648	thoc1	100	89.144	Poecilia_latipinna
ENSMALG00000021872	thoc1	100	89.144	ENSPMEG00000007083	thoc1	100	89.144	Poecilia_mexicana
ENSMALG00000021872	thoc1	100	89.144	ENSPREG00000006719	thoc1	100	89.144	Poecilia_reticulata
ENSMALG00000021872	thoc1	74	76.337	ENSPPYG00000009049	-	98	76.337	Pongo_abelii
ENSMALG00000021872	thoc1	91	73.499	ENSPCAG00000005320	THOC1	90	73.499	Procavia_capensis
ENSMALG00000021872	thoc1	99	72.504	ENSPCOG00000009234	THOC1	98	72.504	Propithecus_coquereli
ENSMALG00000021872	thoc1	99	71.429	ENSPVAG00000004007	THOC1	98	71.429	Pteropus_vampyrus
ENSMALG00000021872	thoc1	100	92.202	ENSPNYG00000019152	thoc1	100	92.202	Pundamilia_nyererei
ENSMALG00000021872	thoc1	99	84.227	ENSPNAG00000023390	thoc1	99	83.920	Pygocentrus_nattereri
ENSMALG00000021872	thoc1	93	54.049	ENSRNOG00000015332	Thoc1	94	60.573	Rattus_norvegicus
ENSMALG00000021872	thoc1	99	72.340	ENSRBIG00000033738	THOC1	99	74.523	Rhinopithecus_bieti
ENSMALG00000021872	thoc1	99	73.118	ENSRROG00000044988	THOC1	96	78.655	Rhinopithecus_roxellana
ENSMALG00000021872	thoc1	99	72.811	ENSSBOG00000016556	THOC1	98	72.811	Saimiri_boliviensis_boliviensis
ENSMALG00000021872	thoc1	99	73.425	ENSSHAG00000014829	THOC1	98	73.425	Sarcophilus_harrisii
ENSMALG00000021872	thoc1	99	86.830	ENSSFOG00015021527	thoc1	99	86.830	Scleropages_formosus
ENSMALG00000021872	thoc1	100	88.280	ENSSMAG00000018465	thoc1	99	88.280	Scophthalmus_maximus
ENSMALG00000021872	thoc1	100	93.578	ENSSDUG00000016810	thoc1	100	93.578	Seriola_dumerili
ENSMALG00000021872	thoc1	100	93.272	ENSSLDG00000015555	thoc1	100	93.272	Seriola_lalandi_dorsalis
ENSMALG00000021872	thoc1	85	74.336	ENSSARG00000006910	THOC1	86	71.815	Sorex_araneus
ENSMALG00000021872	thoc1	98	73.396	ENSSPUG00000007238	THOC1	98	72.308	Sphenodon_punctatus
ENSMALG00000021872	thoc1	100	87.805	ENSSPAG00000018847	thoc1	99	87.805	Stegastes_partitus
ENSMALG00000021872	thoc1	99	73.425	ENSSSCG00000025653	THOC1	93	73.425	Sus_scrofa
ENSMALG00000021872	thoc1	99	73.160	ENSTGUG00000010204	THOC1	99	73.160	Taeniopygia_guttata
ENSMALG00000021872	thoc1	100	88.838	ENSTRUG00000013518	thoc1	100	88.838	Takifugu_rubripes
ENSMALG00000021872	thoc1	100	88.991	ENSTNIG00000008473	thoc1	99	88.991	Tetraodon_nigroviridis
ENSMALG00000021872	thoc1	99	66.052	ENSTBEG00000016920	THOC1	98	66.052	Tupaia_belangeri
ENSMALG00000021872	thoc1	99	67.431	ENSTTRG00000016664	THOC1	99	67.431	Tursiops_truncatus
ENSMALG00000021872	thoc1	99	73.425	ENSUAMG00000002527	THOC1	98	73.824	Ursus_americanus
ENSMALG00000021872	thoc1	99	73.425	ENSUMAG00000019693	THOC1	98	73.425	Ursus_maritimus
ENSMALG00000021872	thoc1	70	66.524	ENSVPAG00000003726	-	66	67.220	Vicugna_pacos
ENSMALG00000021872	thoc1	99	73.425	ENSVVUG00000004384	THOC1	98	73.425	Vulpes_vulpes
ENSMALG00000021872	thoc1	99	69.711	ENSXETG00000003155	thoc1	97	69.711	Xenopus_tropicalis
ENSMALG00000021872	thoc1	97	83.176	ENSXCOG00000016085	thoc1	92	83.176	Xiphophorus_couchianus
ENSMALG00000021872	thoc1	100	89.144	ENSXMAG00000002353	thoc1	100	89.144	Xiphophorus_maculatus