EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000021901 (Gene tree)
Gene ID: -
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR domain containing 12b
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 3325 bases
Position: chrKV884737.1:2143710-2147034
Accession: ZDB-GENE-041114-172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000031735	zf-C2H2	PF00096.26	5.2e-13	1	2
ENSMALP00000031735	zf-C2H2	PF00096.26	5.2e-13	2	2
ENSMALP00000031735	zf-met	PF12874.7	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000032287	-	972	-	ENSMALP00000031735	323 (aa)	-	-

Gene Model

Click here to download ENSMALG00000021901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000021901's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000021901	prdm12b	96	70.303	ENSMALG00000003045	-	82	72.121
ENSMALG00000021901	prdm12b	80	42.105	ENSMALG00000013934	prdm5	90	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000021901	prdm12b	88	71.171	ENSG00000130711	PRDM12	99	66.133	Homo_sapiens
ENSMALG00000021901	prdm12b	96	63.208	ENSAPOG00000018234	-	85	63.208	Acanthochromis_polyacanthus
ENSMALG00000021901	prdm12b	99	74.611	ENSAPOG00000016051	prdm12b	100	75.389	Acanthochromis_polyacanthus
ENSMALG00000021901	prdm12b	88	68.468	ENSAMEG00000016234	PRDM12	99	68.675	Ailuropoda_melanoleuca
ENSMALG00000021901	prdm12b	98	79.193	ENSACIG00000005193	-	83	79.193	Amphilophus_citrinellus
ENSMALG00000021901	prdm12b	99	74.934	ENSACIG00000019578	prdm12b	100	75.726	Amphilophus_citrinellus
ENSMALG00000021901	prdm12b	99	74.607	ENSAOCG00000015040	prdm12b	84	86.335	Amphiprion_ocellaris
ENSMALG00000021901	prdm12b	99	75.198	ENSAPEG00000015092	prdm12b	100	76.253	Amphiprion_percula
ENSMALG00000021901	prdm12b	96	73.231	ENSAPEG00000022849	-	82	73.538	Amphiprion_percula
ENSMALG00000021901	prdm12b	96	77.744	ENSATEG00000014595	-	86	78.354	Anabas_testudineus
ENSMALG00000021901	prdm12b	93	68.966	ENSANAG00000020616	PRDM12	99	68.966	Aotus_nancymaae
ENSMALG00000021901	prdm12b	99	73.458	ENSACLG00000011876	prdm12b	100	73.458	Astatotilapia_calliptera
ENSMALG00000021901	prdm12b	96	75.684	ENSACLG00000007631	-	84	76.119	Astatotilapia_calliptera
ENSMALG00000021901	prdm12b	96	80.061	ENSAMXG00000008540	PRDM12	100	70.000	Astyanax_mexicanus
ENSMALG00000021901	prdm12b	99	71.046	ENSAMXG00000033665	prdm12b	86	79.257	Astyanax_mexicanus
ENSMALG00000021901	prdm12b	88	71.171	ENSBTAG00000023797	PRDM12	99	66.846	Bos_taurus
ENSMALG00000021901	prdm12b	88	71.171	ENSCJAG00000020540	PRDM12	99	67.200	Callithrix_jacchus
ENSMALG00000021901	prdm12b	84	81.818	ENSCAFG00000023076	PRDM12	95	74.841	Canis_familiaris
ENSMALG00000021901	prdm12b	88	71.171	ENSCAFG00020024046	PRDM12	99	66.398	Canis_lupus_dingo
ENSMALG00000021901	prdm12b	88	71.171	ENSCHIG00000025005	PRDM12	99	66.935	Capra_hircus
ENSMALG00000021901	prdm12b	84	70.093	ENSCPOG00000005901	PRDM12	95	70.093	Cavia_porcellus
ENSMALG00000021901	prdm12b	88	71.171	ENSCCAG00000037485	PRDM12	99	66.577	Cebus_capucinus
ENSMALG00000021901	prdm12b	88	71.171	ENSCATG00000020327	PRDM12	99	66.577	Cercocebus_atys
ENSMALG00000021901	prdm12b	88	71.171	ENSCLAG00000005499	PRDM12	89	71.171	Chinchilla_lanigera
ENSMALG00000021901	prdm12b	88	71.171	ENSCSAG00000014756	PRDM12	99	66.398	Chlorocebus_sabaeus
ENSMALG00000021901	prdm12b	99	68.194	ENSCPBG00000022628	PRDM12	99	68.194	Chrysemys_picta_bellii
ENSMALG00000021901	prdm12b	88	71.171	ENSCGRG00001015005	Prdm12	99	66.133	Cricetulus_griseus_chok1gshd
ENSMALG00000021901	prdm12b	96	75.000	ENSCVAG00000000944	-	85	76.524	Cyprinodon_variegatus
ENSMALG00000021901	prdm12b	99	74.731	ENSCVAG00000017166	prdm12b	100	76.676	Cyprinodon_variegatus
ENSMALG00000021901	prdm12b	99	71.237	ENSDARG00000007430	prdm12b	100	71.237	Danio_rerio
ENSMALG00000021901	prdm12b	81	85.057	ENSDNOG00000042302	PRDM12	82	76.052	Dasypus_novemcinctus
ENSMALG00000021901	prdm12b	77	69.403	ENSEBUG00000016780	prdm12b	62	69.818	Eptatretus_burgeri
ENSMALG00000021901	prdm12b	93	68.966	ENSEASG00005008472	PRDM12	99	66.400	Equus_asinus_asinus
ENSMALG00000021901	prdm12b	93	68.966	ENSECAG00000005933	PRDM12	99	66.400	Equus_caballus
ENSMALG00000021901	prdm12b	98	76.923	ENSELUG00000013674	PRDM12	86	79.692	Esox_lucius
ENSMALG00000021901	prdm12b	99	70.699	ENSELUG00000009905	prdm12b	100	70.699	Esox_lucius
ENSMALG00000021901	prdm12b	88	71.171	ENSFCAG00000043086	PRDM12	99	66.577	Felis_catus
ENSMALG00000021901	prdm12b	99	68.207	ENSFALG00000001445	PRDM12	89	68.207	Ficedula_albicollis
ENSMALG00000021901	prdm12b	96	84.076	ENSFHEG00000003944	prdm12b	84	86.349	Fundulus_heteroclitus
ENSMALG00000021901	prdm12b	93	77.215	ENSFHEG00000007746	-	78	78.275	Fundulus_heteroclitus
ENSMALG00000021901	prdm12b	88	75.976	ENSGMOG00000011797	prdm12b	100	70.161	Gadus_morhua
ENSMALG00000021901	prdm12b	99	68.207	ENSGALG00000003895	PRDM12	99	68.207	Gallus_gallus
ENSMALG00000021901	prdm12b	99	73.087	ENSGAFG00000010827	prdm12b	99	74.005	Gambusia_affinis
ENSMALG00000021901	prdm12b	99	77.297	ENSGACG00000016713	prdm12b	99	77.297	Gasterosteus_aculeatus
ENSMALG00000021901	prdm12b	99	68.194	ENSGAGG00000014083	PRDM12	99	68.194	Gopherus_agassizii
ENSMALG00000021901	prdm12b	88	70.871	ENSGGOG00000010568	PRDM12	99	65.867	Gorilla_gorilla
ENSMALG00000021901	prdm12b	99	74.801	ENSHBUG00000022878	prdm12b	100	75.862	Haplochromis_burtoni
ENSMALG00000021901	prdm12b	96	75.684	ENSHBUG00000022537	-	78	76.119	Haplochromis_burtoni
ENSMALG00000021901	prdm12b	88	71.171	ENSHGLG00000013939	PRDM12	99	66.133	Heterocephalus_glaber_female
ENSMALG00000021901	prdm12b	88	73.392	ENSHCOG00000003663	prdm12b	100	70.558	Hippocampus_comes
ENSMALG00000021901	prdm12b	93	75.166	ENSHCOG00000021167	-	78	75.166	Hippocampus_comes
ENSMALG00000021901	prdm12b	99	71.111	ENSIPUG00000019544	PRDM12	100	71.111	Ictalurus_punctatus
ENSMALG00000021901	prdm12b	99	71.850	ENSIPUG00000017053	prdm12b	86	80.374	Ictalurus_punctatus
ENSMALG00000021901	prdm12b	94	68.272	ENSSTOG00000005986	PRDM12	90	68.272	Ictidomys_tridecemlineatus
ENSMALG00000021901	prdm12b	88	70.871	ENSJJAG00000005424	Prdm12	98	70.871	Jaculus_jaculus
ENSMALG00000021901	prdm12b	99	68.227	ENSKMAG00000016921	prdm12b	100	69.951	Kryptolebias_marmoratus
ENSMALG00000021901	prdm12b	96	76.677	ENSKMAG00000021205	-	83	75.549	Kryptolebias_marmoratus
ENSMALG00000021901	prdm12b	99	75.332	ENSLBEG00000017769	prdm12b	100	76.393	Labrus_bergylta
ENSMALG00000021901	prdm12b	98	76.716	ENSLBEG00000007776	-	84	78.882	Labrus_bergylta
ENSMALG00000021901	prdm12b	100	66.667	ENSLACG00000017560	PRDM12	100	66.667	Latimeria_chalumnae
ENSMALG00000021901	prdm12b	99	69.272	ENSLOCG00000005429	prdm12b	99	70.430	Lepisosteus_oculatus
ENSMALG00000021901	prdm12b	88	69.822	ENSLAFG00000006979	PRDM12	92	67.705	Loxodonta_africana
ENSMALG00000021901	prdm12b	99	65.600	ENSMFAG00000040322	PRDM12	99	66.133	Macaca_fascicularis
ENSMALG00000021901	prdm12b	88	71.171	ENSMNEG00000037234	PRDM12	99	66.577	Macaca_nemestrina
ENSMALG00000021901	prdm12b	99	79.144	ENSMAMG00000013212	prdm12b	100	79.679	Mastacembelus_armatus
ENSMALG00000021901	prdm12b	98	73.134	ENSMAMG00000018988	-	83	73.731	Mastacembelus_armatus
ENSMALG00000021901	prdm12b	96	75.227	ENSMZEG00005000415	PRDM12	85	75.964	Maylandia_zebra
ENSMALG00000021901	prdm12b	98	67.956	ENSMGAG00000005438	PRDM12	98	67.956	Meleagris_gallopavo
ENSMALG00000021901	prdm12b	99	66.220	ENSMAUG00000013040	Prdm12	99	66.220	Mesocricetus_auratus
ENSMALG00000021901	prdm12b	88	71.171	ENSMICG00000015480	PRDM12	99	66.398	Microcebus_murinus
ENSMALG00000021901	prdm12b	99	67.116	ENSMOCG00000021026	Prdm12	93	69.253	Microtus_ochrogaster
ENSMALG00000021901	prdm12b	99	67.925	ENSMODG00000012108	PRDM12	99	67.925	Monodelphis_domestica
ENSMALG00000021901	prdm12b	88	71.171	MGP_CAROLIEiJ_G0023414	Prdm12	99	66.133	Mus_caroli
ENSMALG00000021901	prdm12b	88	71.171	ENSMUSG00000079466	Prdm12	99	66.133	Mus_musculus
ENSMALG00000021901	prdm12b	88	71.171	MGP_PahariEiJ_G0024871	Prdm12	99	66.133	Mus_pahari
ENSMALG00000021901	prdm12b	88	71.171	MGP_SPRETEiJ_G0024331	Prdm12	99	66.133	Mus_spretus
ENSMALG00000021901	prdm12b	88	71.471	ENSNGAG00000018480	Prdm12	99	66.048	Nannospalax_galili
ENSMALG00000021901	prdm12b	96	71.885	ENSNBRG00000024312	-	82	70.219	Neolamprologus_brichardi
ENSMALG00000021901	prdm12b	99	74.474	ENSNBRG00000006727	prdm12b	100	75.000	Neolamprologus_brichardi
ENSMALG00000021901	prdm12b	99	60.108	ENSMEUG00000003828	PRDM12	99	60.108	Notamacropus_eugenii
ENSMALG00000021901	prdm12b	88	70.871	ENSOPRG00000008680	PRDM12	98	70.871	Ochotona_princeps
ENSMALG00000021901	prdm12b	93	68.966	ENSODEG00000016282	PRDM12	64	68.966	Octodon_degus
ENSMALG00000021901	prdm12b	73	77.021	ENSOANG00000001043	PRDM12	100	77.021	Ornithorhynchus_anatinus
ENSMALG00000021901	prdm12b	79	86.525	ENSOCUG00000008241	PRDM12	85	81.985	Oryctolagus_cuniculus
ENSMALG00000021901	prdm12b	97	83.077	ENSORLG00000007114	prdm12b	85	84.000	Oryzias_latipes
ENSMALG00000021901	prdm12b	96	76.292	ENSORLG00000017558	-	84	77.508	Oryzias_latipes
ENSMALG00000021901	prdm12b	96	76.061	ENSORLG00020013167	-	84	77.273	Oryzias_latipes_hni
ENSMALG00000021901	prdm12b	99	72.632	ENSORLG00020019565	prdm12b	85	84.098	Oryzias_latipes_hni
ENSMALG00000021901	prdm12b	98	83.436	ENSORLG00015007621	prdm12b	85	84.663	Oryzias_latipes_hsok
ENSMALG00000021901	prdm12b	96	76.292	ENSORLG00015003435	-	84	77.508	Oryzias_latipes_hsok
ENSMALG00000021901	prdm12b	96	77.918	ENSOMEG00000007762	-	83	77.879	Oryzias_melastigma
ENSMALG00000021901	prdm12b	99	73.438	ENSOMEG00000004134	prdm12b	85	84.049	Oryzias_melastigma
ENSMALG00000021901	prdm12b	88	71.171	ENSOGAG00000007557	PRDM12	97	71.171	Otolemur_garnettii
ENSMALG00000021901	prdm12b	76	67.797	ENSPPAG00000031506	-	97	67.797	Pan_paniscus
ENSMALG00000021901	prdm12b	99	61.290	ENSPPRG00000023024	PRDM12	92	61.290	Panthera_pardus
ENSMALG00000021901	prdm12b	88	71.171	ENSPTRG00000043324	-	99	66.133	Pan_troglodytes
ENSMALG00000021901	prdm12b	88	71.171	ENSPTRG00000021475	PRDM12	99	66.133	Pan_troglodytes
ENSMALG00000021901	prdm12b	88	71.171	ENSPANG00000025967	PRDM12	99	66.577	Papio_anubis
ENSMALG00000021901	prdm12b	99	69.705	ENSPKIG00000007228	prdm12b	100	70.856	Paramormyrops_kingsleyae
ENSMALG00000021901	prdm12b	85	79.211	ENSPKIG00000004305	PRDM12	79	80.287	Paramormyrops_kingsleyae
ENSMALG00000021901	prdm12b	99	67.925	ENSPSIG00000006739	PRDM12	99	67.925	Pelodiscus_sinensis
ENSMALG00000021901	prdm12b	96	72.036	ENSPMGG00000002356	-	83	70.623	Periophthalmus_magnuspinnatus
ENSMALG00000021901	prdm12b	99	76.075	ENSPMGG00000008867	prdm12b	99	76.613	Periophthalmus_magnuspinnatus
ENSMALG00000021901	prdm12b	93	68.857	ENSPEMG00000009969	Prdm12	93	68.857	Peromyscus_maniculatus_bairdii
ENSMALG00000021901	prdm12b	99	67.925	ENSPCIG00000024119	PRDM12	99	67.925	Phascolarctos_cinereus
ENSMALG00000021901	prdm12b	99	73.797	ENSPFOG00000019841	prdm12b	100	73.797	Poecilia_formosa
ENSMALG00000021901	prdm12b	99	72.632	ENSPLAG00000016626	prdm12b	99	73.560	Poecilia_latipinna
ENSMALG00000021901	prdm12b	96	81.481	ENSPMEG00000016698	prdm12b	87	82.716	Poecilia_mexicana
ENSMALG00000021901	prdm12b	99	72.966	ENSPREG00000015073	prdm12b	99	73.107	Poecilia_reticulata
ENSMALG00000021901	prdm12b	96	75.399	ENSPREG00000003211	-	80	75.399	Poecilia_reticulata
ENSMALG00000021901	prdm12b	93	69.253	ENSPPYG00000019694	PRDM12	97	69.253	Pongo_abelii
ENSMALG00000021901	prdm12b	88	71.171	ENSPCOG00000022255	PRDM12	99	65.699	Propithecus_coquereli
ENSMALG00000021901	prdm12b	88	71.171	ENSPVAG00000001511	PRDM12	99	66.310	Pteropus_vampyrus
ENSMALG00000021901	prdm12b	96	75.227	ENSPNYG00000013589	-	85	75.964	Pundamilia_nyererei
ENSMALG00000021901	prdm12b	99	74.406	ENSPNYG00000009607	prdm12b	84	86.207	Pundamilia_nyererei
ENSMALG00000021901	prdm12b	93	78.431	ENSPNAG00000013396	PRDM12	80	78.758	Pygocentrus_nattereri
ENSMALG00000021901	prdm12b	99	70.889	ENSPNAG00000024532	prdm12b	100	71.582	Pygocentrus_nattereri
ENSMALG00000021901	prdm12b	88	71.171	ENSRNOG00000009218	Prdm12	99	66.133	Rattus_norvegicus
ENSMALG00000021901	prdm12b	85	70.769	ENSRBIG00000042712	PRDM12	99	64.499	Rhinopithecus_bieti
ENSMALG00000021901	prdm12b	87	71.429	ENSRROG00000043554	PRDM12	99	71.429	Rhinopithecus_roxellana
ENSMALG00000021901	prdm12b	99	68.011	ENSSHAG00000015972	PRDM12	99	68.011	Sarcophilus_harrisii
ENSMALG00000021901	prdm12b	99	73.779	ENSSMAG00000003754	prdm12b	100	74.807	Scophthalmus_maximus
ENSMALG00000021901	prdm12b	99	69.496	ENSSDUG00000019071	-	100	70.027	Seriola_dumerili
ENSMALG00000021901	prdm12b	96	86.687	ENSSDUG00000023498	prdm12b	84	87.616	Seriola_dumerili
ENSMALG00000021901	prdm12b	96	76.038	ENSSLDG00000013562	-	83	76.038	Seriola_lalandi_dorsalis
ENSMALG00000021901	prdm12b	96	88.438	ENSSLDG00000009557	prdm12b	84	89.062	Seriola_lalandi_dorsalis
ENSMALG00000021901	prdm12b	99	68.464	ENSSPUG00000013424	PRDM12	99	68.464	Sphenodon_punctatus
ENSMALG00000021901	prdm12b	96	68.182	ENSSPAG00000022420	-	86	70.370	Stegastes_partitus
ENSMALG00000021901	prdm12b	99	73.890	ENSSPAG00000018824	prdm12b	100	75.457	Stegastes_partitus
ENSMALG00000021901	prdm12b	88	71.171	ENSSSCG00000005703	PRDM12	99	66.398	Sus_scrofa
ENSMALG00000021901	prdm12b	96	77.636	ENSTRUG00000013239	-	83	77.636	Takifugu_rubripes
ENSMALG00000021901	prdm12b	99	74.531	ENSTRUG00000018659	prdm12b	84	86.032	Takifugu_rubripes
ENSMALG00000021901	prdm12b	100	73.797	ENSTNIG00000009020	prdm12b	85	84.013	Tetraodon_nigroviridis
ENSMALG00000021901	prdm12b	96	73.885	ENSTNIG00000005859	-	82	73.885	Tetraodon_nigroviridis
ENSMALG00000021901	prdm12b	88	71.171	ENSUAMG00000009653	PRDM12	94	68.678	Ursus_americanus
ENSMALG00000021901	prdm12b	88	71.171	ENSVVUG00000027662	PRDM12	77	71.171	Vulpes_vulpes
ENSMALG00000021901	prdm12b	99	74.133	ENSXCOG00000002836	prdm12b	99	74.801	Xiphophorus_couchianus
ENSMALG00000021901	prdm12b	93	75.710	ENSXMAG00000028012	-	81	78.571	Xiphophorus_maculatus
ENSMALG00000021901	prdm12b	99	74.667	ENSXMAG00000005537	prdm12b	100	75.332	Xiphophorus_maculatus