EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000022348 (Gene tree)
Gene ID: 109963089
Gene Symbol: -
Alias: RAB5CL|RABL
Full Name: ras-related protein Rab-5C-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 4305 bases
Position: chrKV884757.1:1646126-1650430
Accession: 109963089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000032443	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000033002	-	1142	XM_020605367	ENSMALP00000032443	220 (aa)	XP_020461023	UPI0009B45F1D

Gene Model

Click here to download ENSMALG00000022348's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb04144	Endocytosis	KEGG
malb04145	Phagosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000022348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000022348	-	71	33.540	ENSMALG00000018499	rab34b	60	33.540
ENSMALG00000022348	-	89	33.673	ENSMALG00000022118	rab14	90	33.673
ENSMALG00000022348	-	77	43.529	ENSMALG00000020364	-	82	43.529
ENSMALG00000022348	-	75	36.145	ENSMALG00000012723	RAB39B	78	36.145
ENSMALG00000022348	-	71	37.580	ENSMALG00000016038	RAB15	74	37.580
ENSMALG00000022348	-	83	30.319	ENSMALG00000011273	hrasb	94	30.726
ENSMALG00000022348	-	91	42.365	ENSMALG00000005069	rab18b	95	42.365
ENSMALG00000022348	-	74	47.239	ENSMALG00000003050	rab11a	76	47.239
ENSMALG00000022348	-	89	36.318	ENSMALG00000014727	si:dkey-16l2.16	95	36.318
ENSMALG00000022348	-	75	36.842	ENSMALG00000003712	zgc:101559	73	36.842
ENSMALG00000022348	-	71	46.497	ENSMALG00000015154	rab25a	77	46.497
ENSMALG00000022348	-	74	37.805	ENSMALG00000018973	RAB39B	77	37.805
ENSMALG00000022348	-	95	31.050	ENSMALG00000013514	rab38b	95	31.050
ENSMALG00000022348	-	73	45.963	ENSMALG00000021949	rab11ba	74	45.963
ENSMALG00000022348	-	81	31.892	ENSMALG00000021944	-	89	38.384
ENSMALG00000022348	-	72	42.683	ENSMALG00000004053	RAB7A	79	42.683
ENSMALG00000022348	-	89	42.564	ENSMALG00000012003	rab1ab	96	42.564
ENSMALG00000022348	-	81	40.331	ENSMALG00000020807	-	91	40.331
ENSMALG00000022348	-	76	36.994	ENSMALG00000012630	rab33a	77	36.994
ENSMALG00000022348	-	76	44.311	ENSMALG00000015854	rab6ba	80	44.311
ENSMALG00000022348	-	90	40.796	ENSMALG00000009813	rab18a	97	40.796
ENSMALG00000022348	-	74	31.548	ENSMALG00000018436	RAB29	73	30.539
ENSMALG00000022348	-	99	82.110	ENSMALG00000014929	rab5aa	99	82.110
ENSMALG00000022348	-	86	40.104	ENSMALG00000004342	rab2a	79	42.857
ENSMALG00000022348	-	75	30.120	ENSMALG00000010781	kras	86	30.675
ENSMALG00000022348	-	89	40.513	ENSMALG00000021144	rab1ba	96	40.513
ENSMALG00000022348	-	90	41.414	ENSMALG00000003956	-	92	41.414
ENSMALG00000022348	-	89	43.367	ENSMALG00000006985	-	96	43.077
ENSMALG00000022348	-	83	37.297	ENSMALG00000007905	RAB17	74	37.297
ENSMALG00000022348	-	67	39.865	ENSMALG00000003479	rab35b	92	39.865
ENSMALG00000022348	-	73	39.752	ENSMALG00000021928	rab15	76	39.752
ENSMALG00000022348	-	80	42.286	ENSMALG00000010549	rab41	83	42.286
ENSMALG00000022348	-	54	30.328	ENSMALG00000001217	arl8ba	62	30.328
ENSMALG00000022348	-	73	34.320	ENSMALG00000015936	RAB9A	76	34.320
ENSMALG00000022348	-	74	36.196	ENSMALG00000015762	rab12	80	34.715
ENSMALG00000022348	-	61	30.282	ENSMALG00000008164	arl8bb	73	30.282
ENSMALG00000022348	-	78	43.605	ENSMALG00000021129	zgc:171927	82	43.605
ENSMALG00000022348	-	99	81.735	ENSMALG00000006052	rab5c	99	82.063
ENSMALG00000022348	-	80	34.054	ENSMALG00000007664	rab9b	84	34.054
ENSMALG00000022348	-	50	32.143	ENSMALG00000010254	RAP2B	95	33.600
ENSMALG00000022348	-	89	31.776	ENSMALG00000013152	si:dkey-34d22.5	96	31.776
ENSMALG00000022348	-	74	47.239	ENSMALG00000022187	rab11bb	75	47.239
ENSMALG00000022348	-	75	34.706	ENSMALG00000012506	rab9a	81	34.706
ENSMALG00000022348	-	89	49.490	ENSMALG00000011693	rab22a	98	49.490
ENSMALG00000022348	-	78	42.442	ENSMALG00000017417	rab6bb	83	42.442
ENSMALG00000022348	-	75	30.303	ENSMALG00000014149	rhebl1	89	30.303
ENSMALG00000022348	-	54	30.328	ENSMALG00000019198	arl8a	61	30.328
ENSMALG00000022348	-	90	41.951	ENSMALG00000004093	rab11al	95	41.951
ENSMALG00000022348	-	90	41.176	ENSMALG00000010438	rab30	96	41.176
ENSMALG00000022348	-	74	45.399	ENSMALG00000004112	rab25b	78	45.399
ENSMALG00000022348	-	73	35.404	ENSMALG00000005944	rabl2	70	35.404
ENSMALG00000022348	-	77	30.409	ENSMALG00000017903	rheb	85	30.409
ENSMALG00000022348	-	73	34.375	ENSMALG00000002136	rab23	74	36.842
ENSMALG00000022348	-	72	42.683	ENSMALG00000016312	RAB7A	79	42.683
ENSMALG00000022348	-	82	36.500	ENSMALG00000022693	rab33ba	83	36.500
ENSMALG00000022348	-	88	30.435	ENSMALG00000013806	rab36	79	30.435
ENSMALG00000022348	-	50	32.143	ENSMALG00000015576	-	87	33.600

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000022348	-	99	87.156	ENSG00000108774	RAB5C	100	92.000	Homo_sapiens
ENSMALG00000022348	-	99	87.215	ENSAPOG00000016864	rab5c	99	87.215	Acanthochromis_polyacanthus
ENSMALG00000022348	-	99	87.156	ENSAMEG00000006003	RAB5C	99	87.156	Ailuropoda_melanoleuca
ENSMALG00000022348	-	100	88.182	ENSACIG00000010896	rab5c	99	88.182	Amphilophus_citrinellus
ENSMALG00000022348	-	99	87.215	ENSAOCG00000016614	rab5c	99	87.215	Amphiprion_ocellaris
ENSMALG00000022348	-	98	86.574	ENSAPEG00000017868	-	99	86.574	Amphiprion_percula
ENSMALG00000022348	-	99	88.940	ENSATEG00000001937	rab5c	99	88.940	Anabas_testudineus
ENSMALG00000022348	-	94	89.320	ENSANAG00000025390	RAB5C	100	89.320	Aotus_nancymaae
ENSMALG00000022348	-	96	91.509	ENSACLG00000008615	-	100	90.541	Astatotilapia_calliptera
ENSMALG00000022348	-	100	87.727	ENSACLG00000002706	rab5c	99	87.727	Astatotilapia_calliptera
ENSMALG00000022348	-	95	88.942	ENSAMXG00000037267	-	99	88.942	Astyanax_mexicanus
ENSMALG00000022348	-	99	90.455	ENSAMXG00000043717	rab5c	99	90.455	Astyanax_mexicanus
ENSMALG00000022348	-	99	87.156	ENSBTAG00000006982	RAB5C	99	87.156	Bos_taurus
ENSMALG00000022348	-	99	74.654	WBGene00004268	rab-5	99	74.654	Caenorhabditis_elegans
ENSMALG00000022348	-	99	87.156	ENSCAFG00000015629	RAB5C	99	87.156	Canis_familiaris
ENSMALG00000022348	-	99	87.156	ENSCAFG00020013537	RAB5C	99	87.156	Canis_lupus_dingo
ENSMALG00000022348	-	99	87.156	ENSCHIG00000012960	RAB5C	99	87.156	Capra_hircus
ENSMALG00000022348	-	99	87.615	ENSTSYG00000030531	RAB5C	99	87.615	Carlito_syrichta
ENSMALG00000022348	-	99	87.615	ENSCCAG00000025940	RAB5C	99	87.615	Cebus_capucinus
ENSMALG00000022348	-	99	87.156	ENSCATG00000040873	RAB5C	99	87.156	Cercocebus_atys
ENSMALG00000022348	-	99	87.156	ENSCLAG00000016650	RAB5C	99	87.156	Chinchilla_lanigera
ENSMALG00000022348	-	81	92.179	ENSCHOG00000009886	RAB5C	100	92.179	Choloepus_hoffmanni
ENSMALG00000022348	-	100	74.545	ENSCING00000003340	-	99	74.545	Ciona_intestinalis
ENSMALG00000022348	-	100	73.568	ENSCSAVG00000000613	-	99	80.982	Ciona_savignyi
ENSMALG00000022348	-	99	87.156	ENSCGRG00001014226	Rab5c	99	87.156	Cricetulus_griseus_chok1gshd
ENSMALG00000022348	-	99	87.156	ENSCGRG00000007534	Rab5c	99	87.156	Cricetulus_griseus_crigri
ENSMALG00000022348	-	99	87.671	ENSCSEG00000017024	rab5c	99	87.671	Cynoglossus_semilaevis
ENSMALG00000022348	-	99	89.498	ENSCVAG00000009550	rab5c	99	89.498	Cyprinodon_variegatus
ENSMALG00000022348	-	99	87.615	ENSDNOG00000038853	RAB5C	99	87.615	Dasypus_novemcinctus
ENSMALG00000022348	-	99	88.073	ENSDORG00000006819	Rab5c	99	88.073	Dipodomys_ordii
ENSMALG00000022348	-	88	78.351	FBgn0014010	Rab5	87	78.351	Drosophila_melanogaster
ENSMALG00000022348	-	99	75.688	ENSEBUG00000014794	rab5c	100	75.688	Eptatretus_burgeri
ENSMALG00000022348	-	99	87.156	ENSEASG00005009281	RAB5C	99	87.156	Equus_asinus_asinus
ENSMALG00000022348	-	99	87.615	ENSECAG00000025054	RAB5C	99	87.615	Equus_caballus
ENSMALG00000022348	-	99	87.156	ENSEEUG00000002790	RAB5C	99	87.156	Erinaceus_europaeus
ENSMALG00000022348	-	99	88.479	ENSELUG00000018516	rab5c	99	88.479	Esox_lucius
ENSMALG00000022348	-	100	85.909	ENSELUG00000010439	-	99	85.909	Esox_lucius
ENSMALG00000022348	-	99	87.156	ENSFCAG00000002148	RAB5C	99	87.156	Felis_catus
ENSMALG00000022348	-	99	85.780	ENSFDAG00000021541	RAB5C	99	85.780	Fukomys_damarensis
ENSMALG00000022348	-	99	89.041	ENSFHEG00000012117	rab5c	99	89.041	Fundulus_heteroclitus
ENSMALG00000022348	-	100	90.909	ENSFHEG00000015268	-	100	90.909	Fundulus_heteroclitus
ENSMALG00000022348	-	77	86.982	ENSGMOG00000001876	-	98	86.982	Gadus_morhua
ENSMALG00000022348	-	99	86.301	ENSGMOG00000015096	rab5c	99	86.301	Gadus_morhua
ENSMALG00000022348	-	95	92.344	ENSGAFG00000003642	-	100	89.238	Gambusia_affinis
ENSMALG00000022348	-	99	89.041	ENSGAFG00000000884	rab5c	99	89.041	Gambusia_affinis
ENSMALG00000022348	-	99	86.636	ENSGACG00000008659	rab5c	98	86.636	Gasterosteus_aculeatus
ENSMALG00000022348	-	99	87.156	ENSGGOG00000005472	RAB5C	99	87.156	Gorilla_gorilla
ENSMALG00000022348	-	100	87.727	ENSHBUG00000002014	rab5c	99	87.727	Haplochromis_burtoni
ENSMALG00000022348	-	96	91.509	ENSHBUG00000006823	-	100	90.541	Haplochromis_burtoni
ENSMALG00000022348	-	99	87.156	ENSHGLG00000012067	RAB5C	99	87.156	Heterocephalus_glaber_female
ENSMALG00000022348	-	100	89.140	ENSHCOG00000004662	rab5c	98	89.140	Hippocampus_comes
ENSMALG00000022348	-	95	87.143	ENSHCOG00000020238	-	99	85.388	Hippocampus_comes
ENSMALG00000022348	-	94	87.923	ENSIPUG00000020082	rab5c	99	87.783	Ictalurus_punctatus
ENSMALG00000022348	-	99	87.615	ENSSTOG00000006620	RAB5C	99	87.615	Ictidomys_tridecemlineatus
ENSMALG00000022348	-	99	87.615	ENSJJAG00000021181	Rab5c	99	87.615	Jaculus_jaculus
ENSMALG00000022348	-	99	88.128	ENSKMAG00000020038	rab5c	99	88.128	Kryptolebias_marmoratus
ENSMALG00000022348	-	100	92.273	ENSKMAG00000017417	-	100	92.273	Kryptolebias_marmoratus
ENSMALG00000022348	-	100	93.182	ENSLBEG00000010408	-	100	93.182	Labrus_bergylta
ENSMALG00000022348	-	99	89.498	ENSLBEG00000004128	rab5c	99	89.498	Labrus_bergylta
ENSMALG00000022348	-	99	87.558	ENSLOCG00000012566	rab5c	100	87.558	Lepisosteus_oculatus
ENSMALG00000022348	-	99	87.156	ENSMFAG00000039627	RAB5C	99	87.156	Macaca_fascicularis
ENSMALG00000022348	-	99	87.156	ENSMNEG00000000355	RAB5C	99	87.156	Macaca_nemestrina
ENSMALG00000022348	-	100	94.545	ENSMAMG00000016207	-	100	94.545	Mastacembelus_armatus
ENSMALG00000022348	-	99	88.128	ENSMAMG00000022322	rab5c	99	88.128	Mastacembelus_armatus
ENSMALG00000022348	-	96	91.509	ENSMZEG00005021090	-	100	90.541	Maylandia_zebra
ENSMALG00000022348	-	100	87.727	ENSMZEG00005022735	rab5c	99	87.727	Maylandia_zebra
ENSMALG00000022348	-	99	87.615	ENSMAUG00000015005	Rab5c	99	87.615	Mesocricetus_auratus
ENSMALG00000022348	-	99	87.615	ENSMICG00000041608	RAB5C	99	87.615	Microcebus_murinus
ENSMALG00000022348	-	99	87.615	ENSMOCG00000018531	-	99	87.615	Microtus_ochrogaster
ENSMALG00000022348	-	100	88.688	ENSMMOG00000020621	rab5c	100	88.688	Mola_mola
ENSMALG00000022348	-	99	88.073	MGP_CAROLIEiJ_G0017184	Rab5c	99	88.073	Mus_caroli
ENSMALG00000022348	-	99	88.073	ENSMUSG00000019173	Rab5c	99	88.073	Mus_musculus
ENSMALG00000022348	-	99	88.073	MGP_PahariEiJ_G0018314	Rab5c	99	88.073	Mus_pahari
ENSMALG00000022348	-	99	88.073	MGP_SPRETEiJ_G0018027	Rab5c	99	88.073	Mus_spretus
ENSMALG00000022348	-	99	87.156	ENSMPUG00000010554	RAB5C	99	87.156	Mustela_putorius_furo
ENSMALG00000022348	-	99	87.615	ENSNGAG00000010286	Rab5c	99	87.615	Nannospalax_galili
ENSMALG00000022348	-	96	91.509	ENSNBRG00000016922	-	100	90.541	Neolamprologus_brichardi
ENSMALG00000022348	-	100	87.727	ENSNBRG00000018165	rab5c	99	87.727	Neolamprologus_brichardi
ENSMALG00000022348	-	81	85.475	ENSOPRG00000008255	RAB5C	100	85.475	Ochotona_princeps
ENSMALG00000022348	-	99	87.156	ENSODEG00000017920	RAB5C	99	87.156	Octodon_degus
ENSMALG00000022348	-	99	88.584	ENSONIG00000001113	rab5c	99	88.584	Oreochromis_niloticus
ENSMALG00000022348	-	99	87.558	ENSORLG00000003882	rab5c	99	87.558	Oryzias_latipes
ENSMALG00000022348	-	99	87.558	ENSORLG00020008388	rab5c	99	87.558	Oryzias_latipes_hni
ENSMALG00000022348	-	99	87.558	ENSORLG00015021900	rab5c	99	87.558	Oryzias_latipes_hsok
ENSMALG00000022348	-	99	87.558	ENSOMEG00000023078	rab5c	99	87.558	Oryzias_melastigma
ENSMALG00000022348	-	99	87.615	ENSOGAG00000009456	RAB5C	99	87.615	Otolemur_garnettii
ENSMALG00000022348	-	99	87.156	ENSOARG00000018768	RAB5C	99	87.156	Ovis_aries
ENSMALG00000022348	-	99	87.156	ENSPPAG00000037206	RAB5C	99	87.156	Pan_paniscus
ENSMALG00000022348	-	99	87.156	ENSPPRG00000005745	RAB5C	99	87.156	Panthera_pardus
ENSMALG00000022348	-	99	87.156	ENSPTIG00000008177	RAB5C	99	87.156	Panthera_tigris_altaica
ENSMALG00000022348	-	99	87.156	ENSPTRG00000009194	RAB5C	99	87.156	Pan_troglodytes
ENSMALG00000022348	-	99	85.714	ENSPKIG00000001237	-	99	85.714	Paramormyrops_kingsleyae
ENSMALG00000022348	-	99	85.253	ENSPKIG00000020112	-	99	85.253	Paramormyrops_kingsleyae
ENSMALG00000022348	-	97	89.671	ENSPMGG00000010792	rab5c	98	89.671	Periophthalmus_magnuspinnatus
ENSMALG00000022348	-	99	87.615	ENSPEMG00000017971	Rab5c	99	87.615	Peromyscus_maniculatus_bairdii
ENSMALG00000022348	-	99	77.523	ENSPMAG00000001399	rab5c	100	77.523	Petromyzon_marinus
ENSMALG00000022348	-	99	74.554	ENSPMAG00000000008	rab5c	100	74.554	Petromyzon_marinus
ENSMALG00000022348	-	99	77.064	ENSPMAG00000007867	rab5c	100	77.064	Petromyzon_marinus
ENSMALG00000022348	-	99	86.239	ENSPCIG00000020225	-	99	86.239	Phascolarctos_cinereus
ENSMALG00000022348	-	99	89.041	ENSPLAG00000004790	rab5c	99	89.041	Poecilia_latipinna
ENSMALG00000022348	-	99	90.868	ENSPLAG00000016333	-	100	90.868	Poecilia_latipinna
ENSMALG00000022348	-	99	89.041	ENSPMEG00000011336	rab5c	99	89.041	Poecilia_mexicana
ENSMALG00000022348	-	97	91.549	ENSPMEG00000012614	-	99	90.045	Poecilia_mexicana
ENSMALG00000022348	-	86	92.063	ENSPREG00000022167	-	89	93.443	Poecilia_reticulata
ENSMALG00000022348	-	99	89.041	ENSPREG00000010146	rab5c	99	89.041	Poecilia_reticulata
ENSMALG00000022348	-	99	87.156	ENSPPYG00000008398	RAB5C	99	87.156	Pongo_abelii
ENSMALG00000022348	-	99	86.697	ENSPCAG00000016412	RAB5C	99	86.697	Procavia_capensis
ENSMALG00000022348	-	99	87.615	ENSPCOG00000026327	RAB5C	99	87.615	Propithecus_coquereli
ENSMALG00000022348	-	99	87.615	ENSPVAG00000003867	RAB5C	99	87.615	Pteropus_vampyrus
ENSMALG00000022348	-	100	87.727	ENSPNYG00000010615	rab5c	99	87.727	Pundamilia_nyererei
ENSMALG00000022348	-	96	91.509	ENSPNYG00000015851	-	100	90.541	Pundamilia_nyererei
ENSMALG00000022348	-	99	88.584	ENSPNAG00000028138	rab5c	99	88.584	Pygocentrus_nattereri
ENSMALG00000022348	-	95	87.500	ENSPNAG00000002218	-	98	87.500	Pygocentrus_nattereri
ENSMALG00000022348	-	99	87.615	ENSRNOG00000018568	Rab5c	99	87.615	Rattus_norvegicus
ENSMALG00000022348	-	99	87.156	ENSRBIG00000031376	RAB5C	99	87.156	Rhinopithecus_bieti
ENSMALG00000022348	-	99	87.156	ENSRROG00000032895	RAB5C	99	87.156	Rhinopithecus_roxellana
ENSMALG00000022348	-	99	87.615	ENSSBOG00000032552	-	99	87.615	Saimiri_boliviensis_boliviensis
ENSMALG00000022348	-	99	86.697	ENSSHAG00000005267	-	99	86.697	Sarcophilus_harrisii
ENSMALG00000022348	-	99	85.321	ENSSFOG00015009988	-	99	85.321	Scleropages_formosus
ENSMALG00000022348	-	95	88.095	ENSSMAG00000007323	rab5c	99	87.215	Scophthalmus_maximus
ENSMALG00000022348	-	99	89.041	ENSSDUG00000023008	rab5c	99	89.041	Seriola_dumerili
ENSMALG00000022348	-	99	88.128	ENSSLDG00000017771	rab5c	99	88.128	Seriola_lalandi_dorsalis
ENSMALG00000022348	-	99	87.156	ENSSPUG00000012950	-	99	87.156	Sphenodon_punctatus
ENSMALG00000022348	-	99	89.041	ENSSPAG00000006436	rab5c	99	89.041	Stegastes_partitus
ENSMALG00000022348	-	99	87.156	ENSSSCG00000032467	RAB5C	99	87.156	Sus_scrofa
ENSMALG00000022348	-	99	88.128	ENSTRUG00000015590	rab5c	99	88.128	Takifugu_rubripes
ENSMALG00000022348	-	99	87.558	ENSTNIG00000011711	rab5c	98	87.558	Tetraodon_nigroviridis
ENSMALG00000022348	-	99	87.156	ENSTBEG00000007092	RAB5C	99	87.156	Tupaia_belangeri
ENSMALG00000022348	-	99	86.697	ENSTTRG00000006673	RAB5C	99	86.697	Tursiops_truncatus
ENSMALG00000022348	-	99	87.156	ENSUAMG00000024343	RAB5C	99	87.156	Ursus_americanus
ENSMALG00000022348	-	99	87.156	ENSUMAG00000023270	RAB5C	99	87.156	Ursus_maritimus
ENSMALG00000022348	-	95	92.823	ENSXCOG00000006300	-	100	89.686	Xiphophorus_couchianus
ENSMALG00000022348	-	99	89.498	ENSXCOG00000016788	rab5c	99	90.094	Xiphophorus_couchianus
ENSMALG00000022348	-	99	91.324	ENSXMAG00000022179	-	100	91.324	Xiphophorus_maculatus
ENSMALG00000022348	-	99	89.041	ENSXMAG00000003266	rab5c	99	89.041	Xiphophorus_maculatus