EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000022679 (Gene tree)
Gene ID: -
Gene Symbol: rbm12
Alias: zgc:193560|zgc:193570
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 6657 bases
Position: chrKV884798.1:1048852-1055508
Accession: ZDB-GENE-081022-16
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000032968	RRM_1	PF00076.22	3.8e-26	1	3
ENSMALP00000032968	RRM_1	PF00076.22	3.8e-26	2	3
ENSMALP00000032968	RRM_1	PF00076.22	3.8e-26	3	3
ENSMALP00000032967	RRM_1	PF00076.22	2.3e-24	1	3
ENSMALP00000032967	RRM_1	PF00076.22	2.3e-24	2	3
ENSMALP00000032967	RRM_1	PF00076.22	2.3e-24	3	3
ENSMALP00000032966	RRM_1	PF00076.22	1.3e-21	1	2
ENSMALP00000032966	RRM_1	PF00076.22	1.3e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000033529	-	915	-	ENSMALP00000032967	304 (aa)	-	-
ENSMALT00000033528	-	897	-	ENSMALP00000032966	298 (aa)	-	-
ENSMALT00000033530	-	1116	-	ENSMALP00000032968	371 (aa)	-	-

Gene Model

Click here to download ENSMALG00000022679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000022679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000022679	rbm12	88	37.500	ENSMALG00000003999	hnrnph1	94	35.052

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000022679	rbm12	100	84.539	ENSACIG00000011053	rbm12	50	83.796	Amphilophus_citrinellus
ENSMALG00000022679	rbm12	100	97.260	ENSAOCG00000019579	rbm12	58	97.260	Amphiprion_ocellaris
ENSMALG00000022679	rbm12	96	30.547	ENSEBUG00000016806	rbm12	73	34.727	Eptatretus_burgeri
ENSMALG00000022679	rbm12	100	76.712	ENSFALG00000012516	RBM12	50	76.712	Ficedula_albicollis
ENSMALG00000022679	rbm12	100	84.590	ENSGACG00000004202	rbm12	51	83.654	Gasterosteus_aculeatus
ENSMALG00000022679	rbm12	83	88.235	ENSMAMG00000001497	rbm12	69	61.935	Mastacembelus_armatus
ENSMALG00000022679	rbm12	100	94.521	ENSMMOG00000013495	rbm12	60	94.521	Mola_mola
ENSMALG00000022679	rbm12	100	76.712	ENSPSIG00000007369	RBM12	54	76.712	Pelodiscus_sinensis
ENSMALG00000022679	rbm12	99	65.568	ENSPMGG00000018816	rbm12	95	73.563	Periophthalmus_magnuspinnatus
ENSMALG00000022679	rbm12	99	80.392	ENSPFOG00000023551	rbm12	70	78.704	Poecilia_formosa
ENSMALG00000022679	rbm12	99	80.882	ENSXCOG00000014073	rbm12	50	79.167	Xiphophorus_couchianus