EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000000192 (Gene tree)
Gene ID: 113125681
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 6080 bases
Position: chrOOHQ01000119.1:3778580-3784659
Accession: 113125681
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000000272	RRM_1	PF00076.22	2.7e-33	1	2
ENSMAMP00000000272	RRM_1	PF00076.22	2.7e-33	2	2
ENSMAMP00000000273	RRM_1	PF00076.22	3.2e-33	1	2
ENSMAMP00000000273	RRM_1	PF00076.22	3.2e-33	2	2
ENSMAMP00000000272	RRM_3	PF08777.11	1.6e-07	1	1
ENSMAMP00000000273	RRM_3	PF08777.11	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000000277	-	2070	-	ENSMAMP00000000272	277 (aa)	XP_026155080	UPI000E465C70
ENSMAMT00000000278	-	2181	-	ENSMAMP00000000273	291 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000000192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000000192's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000000192	srsf5a	61	41.243	ENSMAMG00000019691	-	68	44.253
ENSMAMG00000000192	srsf5a	69	61.579	ENSMAMG00000004888	srsf4	97	55.639
ENSMAMG00000000192	srsf5a	84	38.494	ENSMAMG00000011581	srsf9	80	41.148
ENSMAMG00000000192	srsf5a	61	41.954	ENSMAMG00000018454	-	67	42.529
ENSMAMG00000000192	srsf5a	64	65.193	ENSMAMG00000017161	srsf6a	52	64.641
ENSMAMG00000000192	srsf5a	73	39.171	ENSMAMG00000019687	-	80	38.350
ENSMAMG00000000192	srsf5a	66	70.053	ENSMAMG00000002673	srsf5b	63	71.739

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000000192	srsf5a	100	83.784	ENSAPOG00000017395	srsf5a	100	89.189	Acanthochromis_polyacanthus
ENSMAMG00000000192	srsf5a	92	82.692	ENSACIG00000011892	srsf5a	98	87.500	Amphilophus_citrinellus
ENSMAMG00000000192	srsf5a	83	86.920	ENSAOCG00000014967	srsf5a	100	90.785	Amphiprion_ocellaris
ENSMAMG00000000192	srsf5a	83	86.920	ENSAPEG00000009297	srsf5a	100	90.444	Amphiprion_percula
ENSMAMG00000000192	srsf5a	93	88.679	ENSATEG00000000198	srsf5a	100	89.003	Anabas_testudineus
ENSMAMG00000000192	srsf5a	65	79.235	ENSAPLG00000002469	-	70	78.142	Anas_platyrhynchos
ENSMAMG00000000192	srsf5a	65	79.558	ENSACAG00000029015	-	68	78.453	Anolis_carolinensis
ENSMAMG00000000192	srsf5a	82	87.029	ENSACLG00000027166	srsf5a	100	86.486	Astatotilapia_calliptera
ENSMAMG00000000192	srsf5a	74	81.818	ENSAMXG00000030476	srsf5a	67	87.568	Astyanax_mexicanus
ENSMAMG00000000192	srsf5a	65	81.868	ENSCPBG00000021518	-	70	81.868	Chrysemys_picta_bellii
ENSMAMG00000000192	srsf5a	65	55.838	ENSCSAVG00000011376	-	78	55.330	Ciona_savignyi
ENSMAMG00000000192	srsf5a	83	86.008	ENSCSEG00000008109	srsf5a	100	80.511	Cynoglossus_semilaevis
ENSMAMG00000000192	srsf5a	91	76.208	ENSCVAG00000016982	srsf5a	96	74.436	Cyprinodon_variegatus
ENSMAMG00000000192	srsf5a	65	88.587	ENSDARG00000029818	srsf5a	100	84.962	Danio_rerio
ENSMAMG00000000192	srsf5a	65	80.000	ENSELUG00000020439	srsf5a	62	83.420	Esox_lucius
ENSMAMG00000000192	srsf5a	65	79.006	ENSFALG00000005098	-	64	79.121	Ficedula_albicollis
ENSMAMG00000000192	srsf5a	83	75.581	ENSFHEG00000003955	srsf5a	97	68.276	Fundulus_heteroclitus
ENSMAMG00000000192	srsf5a	65	90.608	ENSGMOG00000000869	srsf5a	94	90.608	Gadus_morhua
ENSMAMG00000000192	srsf5a	65	78.453	ENSGALG00000033259	SRSF5A	63	77.348	Gallus_gallus
ENSMAMG00000000192	srsf5a	84	75.104	ENSGAFG00000018237	srsf5a	74	65.126	Gambusia_affinis
ENSMAMG00000000192	srsf5a	65	81.868	ENSGAGG00000007312	-	70	81.868	Gopherus_agassizii
ENSMAMG00000000192	srsf5a	82	86.975	ENSHBUG00000014048	srsf5a	100	86.441	Haplochromis_burtoni
ENSMAMG00000000192	srsf5a	65	89.785	ENSHCOG00000017557	srsf5a	100	76.159	Hippocampus_comes
ENSMAMG00000000192	srsf5a	65	81.579	ENSIPUG00000003439	srsf5a	69	84.737	Ictalurus_punctatus
ENSMAMG00000000192	srsf5a	82	77.778	ENSKMAG00000014937	srsf5a	72	78.661	Kryptolebias_marmoratus
ENSMAMG00000000192	srsf5a	65	83.590	ENSLBEG00000017153	srsf5a	74	87.179	Labrus_bergylta
ENSMAMG00000000192	srsf5a	65	85.083	ENSLACG00000017874	-	70	85.165	Latimeria_chalumnae
ENSMAMG00000000192	srsf5a	65	87.568	ENSLOCG00000014075	srsf5a	81	75.410	Lepisosteus_oculatus
ENSMAMG00000000192	srsf5a	82	87.395	ENSMZEG00005010485	srsf5a	100	86.780	Maylandia_zebra
ENSMAMG00000000192	srsf5a	70	76.410	ENSMGAG00000011888	-	96	76.687	Meleagris_gallopavo
ENSMAMG00000000192	srsf5a	100	85.763	ENSMMOG00000009793	srsf5a	100	86.102	Mola_mola
ENSMAMG00000000192	srsf5a	93	87.549	ENSMALG00000021194	srsf5a	90	86.770	Monopterus_albus
ENSMAMG00000000192	srsf5a	82	87.764	ENSNBRG00000000771	srsf5a	100	87.075	Neolamprologus_brichardi
ENSMAMG00000000192	srsf5a	82	87.764	ENSONIG00000019583	srsf5a	100	87.075	Oreochromis_niloticus
ENSMAMG00000000192	srsf5a	82	84.581	ENSORLG00000009268	srsf5a	100	83.513	Oryzias_latipes
ENSMAMG00000000192	srsf5a	82	84.581	ENSORLG00020003281	srsf5	100	83.513	Oryzias_latipes_hni
ENSMAMG00000000192	srsf5a	82	84.581	ENSORLG00015023075	srsf5	100	83.513	Oryzias_latipes_hsok
ENSMAMG00000000192	srsf5a	82	86.283	ENSOMEG00000000628	srsf5a	100	86.429	Oryzias_melastigma
ENSMAMG00000000192	srsf5a	65	87.634	ENSPKIG00000002054	srsf5a	68	87.097	Paramormyrops_kingsleyae
ENSMAMG00000000192	srsf5a	65	81.319	ENSPSIG00000008238	-	69	80.220	Pelodiscus_sinensis
ENSMAMG00000000192	srsf5a	84	68.571	ENSPMGG00000020125	srsf5a	55	85.792	Periophthalmus_magnuspinnatus
ENSMAMG00000000192	srsf5a	84	77.647	ENSPFOG00000022993	srsf5a	79	76.984	Poecilia_formosa
ENSMAMG00000000192	srsf5a	83	77.559	ENSPLAG00000005508	srsf5a	78	76.892	Poecilia_latipinna
ENSMAMG00000000192	srsf5a	84	77.647	ENSPMEG00000016339	srsf5a	79	76.984	Poecilia_mexicana
ENSMAMG00000000192	srsf5a	92	73.038	ENSPREG00000018091	srsf5a	80	67.194	Poecilia_reticulata
ENSMAMG00000000192	srsf5a	82	87.395	ENSPNYG00000021245	srsf5a	100	86.780	Pundamilia_nyererei
ENSMAMG00000000192	srsf5a	65	88.043	ENSPNAG00000021333	srsf5a	66	86.957	Pygocentrus_nattereri
ENSMAMG00000000192	srsf5a	65	86.702	ENSSFOG00015008377	srsf5	66	88.710	Scleropages_formosus
ENSMAMG00000000192	srsf5a	100	78.317	ENSSMAG00000010899	srsf5a	83	83.004	Scophthalmus_maximus
ENSMAMG00000000192	srsf5a	93	87.786	ENSSDUG00000006103	srsf5a	100	92.361	Seriola_dumerili
ENSMAMG00000000192	srsf5a	100	86.207	ENSSLDG00000004146	srsf5a	100	92.069	Seriola_lalandi_dorsalis
ENSMAMG00000000192	srsf5a	65	76.796	ENSSPUG00000002052	-	68	75.691	Sphenodon_punctatus
ENSMAMG00000000192	srsf5a	82	89.655	ENSSPAG00000002821	srsf5a	100	91.696	Stegastes_partitus
ENSMAMG00000000192	srsf5a	65	79.558	ENSTGUG00000011492	-	68	79.121	Taeniopygia_guttata
ENSMAMG00000000192	srsf5a	100	83.446	ENSTRUG00000022908	srsf5a	100	84.122	Takifugu_rubripes
ENSMAMG00000000192	srsf5a	99	60.870	ENSXETG00000017937	srsf5a	72	79.787	Xenopus_tropicalis
ENSMAMG00000000192	srsf5a	92	75.089	ENSXCOG00000015338	srsf5a	79	79.668	Xiphophorus_couchianus
ENSMAMG00000000192	srsf5a	92	73.288	ENSXMAG00000012823	srsf5a	80	76.587	Xiphophorus_maculatus