EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000000387 (Gene tree)
Gene ID: 113142428
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 9193 bases
Position: chrOOHQ01000056.1:4527575-4536767
Accession: 113142428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000000664	RRM_1	PF00076.22	3.3e-05	1	1
ENSMAMP00000000645	RRM_1	PF00076.22	3.8e-05	1	1
ENSMAMP00000000664	G-patch	PF01585.23	4.7e-13	1	1
ENSMAMP00000000645	G-patch	PF01585.23	4.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000000679	-	1152	-	ENSMAMP00000000664	383 (aa)	-	-
ENSMAMT00000000659	-	2952	-	ENSMAMP00000000645	421 (aa)	XP_026183237	UPI000E45EEF2

Gene Model

Click here to download ENSMAMG00000000387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000000387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000000387	rbm17	100	78.066	ENSG00000134453	RBM17	100	78.066	Homo_sapiens
ENSMAMG00000000387	rbm17	99	94.005	ENSAPOG00000007101	rbm17	99	94.005	Acanthochromis_polyacanthus
ENSMAMG00000000387	rbm17	100	78.302	ENSAMEG00000002107	RBM17	100	78.302	Ailuropoda_melanoleuca
ENSMAMG00000000387	rbm17	100	87.204	ENSACIG00000006251	rbm17	100	87.204	Amphilophus_citrinellus
ENSMAMG00000000387	rbm17	100	94.299	ENSAOCG00000014892	rbm17	100	94.299	Amphiprion_ocellaris
ENSMAMG00000000387	rbm17	100	94.299	ENSAPEG00000022779	rbm17	100	94.299	Amphiprion_percula
ENSMAMG00000000387	rbm17	100	93.587	ENSATEG00000004406	rbm17	100	93.587	Anabas_testudineus
ENSMAMG00000000387	rbm17	100	79.481	ENSAPLG00000004190	RBM17	100	79.481	Anas_platyrhynchos
ENSMAMG00000000387	rbm17	90	75.578	ENSACAG00000005418	RBM17	99	75.258	Anolis_carolinensis
ENSMAMG00000000387	rbm17	100	78.066	ENSANAG00000030127	RBM17	98	86.777	Aotus_nancymaae
ENSMAMG00000000387	rbm17	100	73.057	ENSANAG00000019330	-	95	85.345	Aotus_nancymaae
ENSMAMG00000000387	rbm17	100	86.698	ENSACLG00000003928	rbm17	100	84.906	Astatotilapia_calliptera
ENSMAMG00000000387	rbm17	100	84.397	ENSAMXG00000005853	rbm17	100	84.161	Astyanax_mexicanus
ENSMAMG00000000387	rbm17	100	78.302	ENSBTAG00000021951	RBM17	100	78.302	Bos_taurus
ENSMAMG00000000387	rbm17	100	77.358	ENSBTAG00000011094	-	100	77.123	Bos_taurus
ENSMAMG00000000387	rbm17	72	36.014	WBGene00010233	F58B3.7	91	32.713	Caenorhabditis_elegans
ENSMAMG00000000387	rbm17	100	78.066	ENSCJAG00000020573	RBM17	100	78.066	Callithrix_jacchus
ENSMAMG00000000387	rbm17	100	78.302	ENSCAFG00000005206	RBM17	100	78.302	Canis_familiaris
ENSMAMG00000000387	rbm17	100	76.590	ENSCAFG00020005420	RBM17	100	74.876	Canis_lupus_dingo
ENSMAMG00000000387	rbm17	100	76.179	ENSCHIG00000019921	-	100	76.179	Capra_hircus
ENSMAMG00000000387	rbm17	100	78.302	ENSCHIG00000023204	-	100	78.302	Capra_hircus
ENSMAMG00000000387	rbm17	100	78.066	ENSTSYG00000001165	RBM17	99	88.136	Carlito_syrichta
ENSMAMG00000000387	rbm17	96	60.294	ENSCAPG00000006275	RBM17	100	64.146	Cavia_aperea
ENSMAMG00000000387	rbm17	100	76.982	ENSCPOG00000005679	RBM17	100	75.000	Cavia_porcellus
ENSMAMG00000000387	rbm17	100	78.066	ENSCCAG00000018655	RBM17	98	86.777	Cebus_capucinus
ENSMAMG00000000387	rbm17	100	78.093	ENSCATG00000041566	RBM17	95	88.983	Cercocebus_atys
ENSMAMG00000000387	rbm17	100	78.774	ENSCLAG00000012195	RBM17	99	78.774	Chinchilla_lanigera
ENSMAMG00000000387	rbm17	100	78.066	ENSCSAG00000013564	RBM17	100	78.066	Chlorocebus_sabaeus
ENSMAMG00000000387	rbm17	93	62.341	ENSCHOG00000005131	RBM17	100	62.341	Choloepus_hoffmanni
ENSMAMG00000000387	rbm17	100	78.302	ENSCPBG00000019836	RBM17	100	78.302	Chrysemys_picta_bellii
ENSMAMG00000000387	rbm17	100	45.070	ENSCSAVG00000008782	-	100	44.471	Ciona_savignyi
ENSMAMG00000000387	rbm17	100	77.830	ENSCANG00000030987	RBM17	95	88.983	Colobus_angolensis_palliatus
ENSMAMG00000000387	rbm17	97	69.512	ENSCANG00000023715	-	99	69.512	Colobus_angolensis_palliatus
ENSMAMG00000000387	rbm17	100	64.267	ENSCGRG00001009256	-	100	64.524	Cricetulus_griseus_chok1gshd
ENSMAMG00000000387	rbm17	100	79.009	ENSCGRG00001013842	Rbm17	100	79.009	Cricetulus_griseus_chok1gshd
ENSMAMG00000000387	rbm17	100	79.009	ENSCGRG00000006907	Rbm17	100	79.009	Cricetulus_griseus_crigri
ENSMAMG00000000387	rbm17	100	86.730	ENSCSEG00000018164	rbm17	100	86.730	Cynoglossus_semilaevis
ENSMAMG00000000387	rbm17	100	83.206	ENSCVAG00000002476	rbm17	100	82.872	Cyprinodon_variegatus
ENSMAMG00000000387	rbm17	100	76.995	ENSDARG00000031346	rbm17	100	79.577	Danio_rerio
ENSMAMG00000000387	rbm17	100	78.066	ENSDNOG00000035920	RBM17	100	78.066	Dasypus_novemcinctus
ENSMAMG00000000387	rbm17	99	38.190	FBgn0086683	Spf45	99	37.845	Drosophila_melanogaster
ENSMAMG00000000387	rbm17	86	78.947	ENSETEG00000006642	RBM17	84	80.090	Echinops_telfairi
ENSMAMG00000000387	rbm17	100	43.299	ENSEBUG00000010253	rbm17	81	69.048	Eptatretus_burgeri
ENSMAMG00000000387	rbm17	100	77.041	ENSEASG00005019205	-	100	75.250	Equus_asinus_asinus
ENSMAMG00000000387	rbm17	93	75.318	ENSEASG00005009236	-	100	75.318	Equus_asinus_asinus
ENSMAMG00000000387	rbm17	100	69.104	ENSECAG00000001379	-	100	69.104	Equus_caballus
ENSMAMG00000000387	rbm17	100	70.619	ENSECAG00000008939	RBM17	100	70.619	Equus_caballus
ENSMAMG00000000387	rbm17	86	61.580	ENSEEUG00000013077	RBM17	100	61.580	Erinaceus_europaeus
ENSMAMG00000000387	rbm17	100	83.916	ENSELUG00000006440	rbm17	100	83.916	Esox_lucius
ENSMAMG00000000387	rbm17	100	78.302	ENSFCAG00000031988	RBM17	100	78.302	Felis_catus
ENSMAMG00000000387	rbm17	100	78.066	ENSFALG00000001790	RBM17	100	78.066	Ficedula_albicollis
ENSMAMG00000000387	rbm17	100	78.774	ENSFDAG00000007470	RBM17	100	78.774	Fukomys_damarensis
ENSMAMG00000000387	rbm17	100	91.924	ENSFHEG00000001266	rbm17	100	90.421	Fundulus_heteroclitus
ENSMAMG00000000387	rbm17	99	81.190	ENSGMOG00000008438	rbm17	100	80.952	Gadus_morhua
ENSMAMG00000000387	rbm17	100	79.245	ENSGALG00000006332	RBM17	100	79.245	Gallus_gallus
ENSMAMG00000000387	rbm17	100	88.836	ENSGAFG00000019879	rbm17	100	88.836	Gambusia_affinis
ENSMAMG00000000387	rbm17	99	90.261	ENSGACG00000019174	rbm17	99	90.261	Gasterosteus_aculeatus
ENSMAMG00000000387	rbm17	100	78.302	ENSGAGG00000019906	RBM17	100	78.302	Gopherus_agassizii
ENSMAMG00000000387	rbm17	100	93.349	ENSHBUG00000016624	rbm17	100	93.349	Haplochromis_burtoni
ENSMAMG00000000387	rbm17	100	78.774	ENSHGLG00000011580	RBM17	100	78.774	Heterocephalus_glaber_female
ENSMAMG00000000387	rbm17	100	78.774	ENSHGLG00100010460	RBM17	100	78.774	Heterocephalus_glaber_male
ENSMAMG00000000387	rbm17	100	66.071	ENSHGLG00100010556	-	100	64.031	Heterocephalus_glaber_male
ENSMAMG00000000387	rbm17	99	87.351	ENSHCOG00000010865	rbm17	100	87.351	Hippocampus_comes
ENSMAMG00000000387	rbm17	100	82.588	ENSIPUG00000007699	Rbm17	100	82.118	Ictalurus_punctatus
ENSMAMG00000000387	rbm17	100	79.009	ENSSTOG00000013591	RBM17	100	79.009	Ictidomys_tridecemlineatus
ENSMAMG00000000387	rbm17	100	58.081	ENSJJAG00000000993	-	100	57.323	Jaculus_jaculus
ENSMAMG00000000387	rbm17	100	79.009	ENSJJAG00000022886	Rbm17	100	79.009	Jaculus_jaculus
ENSMAMG00000000387	rbm17	100	91.211	ENSKMAG00000021400	rbm17	100	91.211	Kryptolebias_marmoratus
ENSMAMG00000000387	rbm17	100	91.449	ENSLBEG00000000881	rbm17	100	91.449	Labrus_bergylta
ENSMAMG00000000387	rbm17	99	65.187	ENSLACG00000017297	RBM17	99	64.802	Latimeria_chalumnae
ENSMAMG00000000387	rbm17	100	80.094	ENSLOCG00000015659	rbm17	100	79.157	Lepisosteus_oculatus
ENSMAMG00000000387	rbm17	100	78.302	ENSLAFG00000011629	RBM17	100	78.302	Loxodonta_africana
ENSMAMG00000000387	rbm17	100	78.093	ENSMFAG00000035521	RBM17	95	88.983	Macaca_fascicularis
ENSMAMG00000000387	rbm17	100	78.066	ENSMMUG00000015152	RBM17	95	88.983	Macaca_mulatta
ENSMAMG00000000387	rbm17	100	78.093	ENSMNEG00000017264	RBM17	95	88.983	Macaca_nemestrina
ENSMAMG00000000387	rbm17	100	78.093	ENSMLEG00000029340	RBM17	95	88.983	Mandrillus_leucophaeus
ENSMAMG00000000387	rbm17	100	93.349	ENSMZEG00005015179	rbm17	100	93.349	Maylandia_zebra
ENSMAMG00000000387	rbm17	100	78.873	ENSMGAG00000003981	RBM17	100	78.873	Meleagris_gallopavo
ENSMAMG00000000387	rbm17	100	79.009	ENSMAUG00000019247	Rbm17	100	79.009	Mesocricetus_auratus
ENSMAMG00000000387	rbm17	100	78.066	ENSMICG00000003976	-	100	78.066	Microcebus_murinus
ENSMAMG00000000387	rbm17	100	73.647	ENSMICG00000041489	-	100	73.647	Microcebus_murinus
ENSMAMG00000000387	rbm17	100	79.009	ENSMOCG00000011847	Rbm17	100	79.009	Microtus_ochrogaster
ENSMAMG00000000387	rbm17	92	65.753	ENSMOCG00000014517	-	99	65.753	Microtus_ochrogaster
ENSMAMG00000000387	rbm17	100	81.690	ENSMMOG00000010264	rbm17	100	81.690	Mola_mola
ENSMAMG00000000387	rbm17	100	77.830	ENSMODG00000016648	RBM17	100	77.830	Monodelphis_domestica
ENSMAMG00000000387	rbm17	100	93.128	ENSMALG00000010597	rbm17	100	94.550	Monopterus_albus
ENSMAMG00000000387	rbm17	100	78.538	MGP_CAROLIEiJ_G0023173	Rbm17	100	78.538	Mus_caroli
ENSMAMG00000000387	rbm17	100	78.538	ENSMUSG00000037197	Rbm17	100	78.538	Mus_musculus
ENSMAMG00000000387	rbm17	100	79.245	MGP_PahariEiJ_G0019233	Rbm17	100	79.245	Mus_pahari
ENSMAMG00000000387	rbm17	100	78.538	MGP_SPRETEiJ_G0024091	Rbm17	100	78.538	Mus_spretus
ENSMAMG00000000387	rbm17	86	76.022	ENSMPUG00000016359	RBM17	96	76.022	Mustela_putorius_furo
ENSMAMG00000000387	rbm17	100	74.314	ENSMLUG00000025709	-	100	74.314	Myotis_lucifugus
ENSMAMG00000000387	rbm17	100	76.706	ENSMLUG00000002302	-	100	76.706	Myotis_lucifugus
ENSMAMG00000000387	rbm17	100	79.009	ENSNGAG00000000741	Rbm17	100	79.009	Nannospalax_galili
ENSMAMG00000000387	rbm17	100	59.585	ENSNGAG00000000663	-	100	58.808	Nannospalax_galili
ENSMAMG00000000387	rbm17	100	84.086	ENSNBRG00000018148	rbm17	100	84.103	Neolamprologus_brichardi
ENSMAMG00000000387	rbm17	100	78.066	ENSNLEG00000033350	RBM17	95	88.983	Nomascus_leucogenys
ENSMAMG00000000387	rbm17	100	72.642	ENSMEUG00000011347	RBM17	100	72.642	Notamacropus_eugenii
ENSMAMG00000000387	rbm17	100	68.657	ENSOPRG00000002993	RBM17	100	68.657	Ochotona_princeps
ENSMAMG00000000387	rbm17	97	60.732	ENSODEG00000007286	-	99	60.732	Octodon_degus
ENSMAMG00000000387	rbm17	100	78.824	ENSODEG00000004393	RBM17	100	78.824	Octodon_degus
ENSMAMG00000000387	rbm17	100	91.211	ENSONIG00000011838	rbm17	100	91.211	Oreochromis_niloticus
ENSMAMG00000000387	rbm17	100	77.594	ENSOANG00000015455	RBM17	100	77.594	Ornithorhynchus_anatinus
ENSMAMG00000000387	rbm17	100	91.449	ENSORLG00000028798	rbm17	100	91.449	Oryzias_latipes
ENSMAMG00000000387	rbm17	100	90.736	ENSORLG00020004593	rbm17	98	90.736	Oryzias_latipes_hni
ENSMAMG00000000387	rbm17	100	91.211	ENSORLG00015000033	rbm17	99	91.211	Oryzias_latipes_hsok
ENSMAMG00000000387	rbm17	100	91.211	ENSOMEG00000012060	rbm17	100	92.500	Oryzias_melastigma
ENSMAMG00000000387	rbm17	100	78.538	ENSOGAG00000015687	RBM17	100	78.538	Otolemur_garnettii
ENSMAMG00000000387	rbm17	100	78.302	ENSOARG00000012975	RBM17	100	78.302	Ovis_aries
ENSMAMG00000000387	rbm17	100	78.066	ENSPPAG00000032347	RBM17	95	88.983	Pan_paniscus
ENSMAMG00000000387	rbm17	100	78.302	ENSPPRG00000010706	RBM17	100	78.302	Panthera_pardus
ENSMAMG00000000387	rbm17	100	78.302	ENSPTIG00000007596	RBM17	100	78.302	Panthera_tigris_altaica
ENSMAMG00000000387	rbm17	100	78.066	ENSPTRG00000002265	RBM17	95	88.983	Pan_troglodytes
ENSMAMG00000000387	rbm17	100	78.093	ENSPANG00000023425	RBM17	95	88.983	Papio_anubis
ENSMAMG00000000387	rbm17	100	79.630	ENSPKIG00000025526	rbm17	100	79.157	Paramormyrops_kingsleyae
ENSMAMG00000000387	rbm17	100	78.605	ENSPKIG00000005048	-	100	78.322	Paramormyrops_kingsleyae
ENSMAMG00000000387	rbm17	100	77.283	ENSPSIG00000012332	RBM17	100	76.815	Pelodiscus_sinensis
ENSMAMG00000000387	rbm17	100	82.227	ENSPMGG00000007980	rbm17	100	80.796	Periophthalmus_magnuspinnatus
ENSMAMG00000000387	rbm17	100	79.009	ENSPEMG00000014320	Rbm17	100	79.009	Peromyscus_maniculatus_bairdii
ENSMAMG00000000387	rbm17	100	77.465	ENSPCIG00000019260	-	100	77.465	Phascolarctos_cinereus
ENSMAMG00000000387	rbm17	100	91.211	ENSPFOG00000013271	rbm17	100	91.211	Poecilia_formosa
ENSMAMG00000000387	rbm17	100	90.736	ENSPLAG00000004455	rbm17	100	90.736	Poecilia_latipinna
ENSMAMG00000000387	rbm17	100	91.211	ENSPMEG00000014864	rbm17	100	91.211	Poecilia_mexicana
ENSMAMG00000000387	rbm17	100	90.974	ENSPREG00000015589	rbm17	100	90.499	Poecilia_reticulata
ENSMAMG00000000387	rbm17	99	59.391	ENSPPYG00000019881	-	100	60.660	Pongo_abelii
ENSMAMG00000000387	rbm17	100	78.066	ENSPPYG00000002067	RBM17	100	78.066	Pongo_abelii
ENSMAMG00000000387	rbm17	81	54.493	ENSPPYG00000019042	-	100	57.413	Pongo_abelii
ENSMAMG00000000387	rbm17	100	70.991	ENSPCAG00000016879	RBM17	100	70.991	Procavia_capensis
ENSMAMG00000000387	rbm17	100	78.066	ENSPCOG00000027881	RBM17	100	78.066	Propithecus_coquereli
ENSMAMG00000000387	rbm17	100	72.544	ENSPVAG00000015499	RBM17	100	72.544	Pteropus_vampyrus
ENSMAMG00000000387	rbm17	100	85.938	ENSPNYG00000015274	rbm17	100	86.423	Pundamilia_nyererei
ENSMAMG00000000387	rbm17	100	84.397	ENSPNAG00000030046	rbm17	100	83.924	Pygocentrus_nattereri
ENSMAMG00000000387	rbm17	100	79.009	ENSRNOG00000018767	Rbm17	100	79.009	Rattus_norvegicus
ENSMAMG00000000387	rbm17	100	78.066	ENSRBIG00000043727	RBM17	95	88.983	Rhinopithecus_bieti
ENSMAMG00000000387	rbm17	100	78.093	ENSRROG00000044142	RBM17	95	88.983	Rhinopithecus_roxellana
ENSMAMG00000000387	rbm17	100	69.340	ENSSBOG00000023653	-	100	68.160	Saimiri_boliviensis_boliviensis
ENSMAMG00000000387	rbm17	100	77.830	ENSSBOG00000031661	-	93	88.696	Saimiri_boliviensis_boliviensis
ENSMAMG00000000387	rbm17	100	78.302	ENSSHAG00000012480	-	100	78.302	Sarcophilus_harrisii
ENSMAMG00000000387	rbm17	100	80.986	ENSSFOG00015009892	rbm17	100	80.000	Scleropages_formosus
ENSMAMG00000000387	rbm17	100	86.806	ENSSMAG00000012368	rbm17	100	86.806	Scophthalmus_maximus
ENSMAMG00000000387	rbm17	100	92.774	ENSSDUG00000015015	rbm17	100	92.774	Seriola_dumerili
ENSMAMG00000000387	rbm17	100	92.774	ENSSLDG00000014486	rbm17	100	92.774	Seriola_lalandi_dorsalis
ENSMAMG00000000387	rbm17	50	75.455	ENSSARG00000001792	-	79	89.024	Sorex_araneus
ENSMAMG00000000387	rbm17	99	77.778	ENSSPUG00000001036	RBM17	99	77.069	Sphenodon_punctatus
ENSMAMG00000000387	rbm17	100	94.537	ENSSPAG00000002338	rbm17	100	94.537	Stegastes_partitus
ENSMAMG00000000387	rbm17	100	78.538	ENSSSCG00000011134	RBM17	100	78.538	Sus_scrofa
ENSMAMG00000000387	rbm17	100	78.538	ENSTGUG00000002013	RBM17	100	78.538	Taeniopygia_guttata
ENSMAMG00000000387	rbm17	100	89.311	ENSTRUG00000010698	rbm17	100	89.311	Takifugu_rubripes
ENSMAMG00000000387	rbm17	100	88.599	ENSTNIG00000006892	rbm17	100	88.599	Tetraodon_nigroviridis
ENSMAMG00000000387	rbm17	100	59.953	ENSTBEG00000014686	RBM17	87	77.483	Tupaia_belangeri
ENSMAMG00000000387	rbm17	90	77.023	ENSTTRG00000001344	RBM17	100	77.023	Tursiops_truncatus
ENSMAMG00000000387	rbm17	100	75.827	ENSUAMG00000009499	RBM17	100	74.627	Ursus_americanus
ENSMAMG00000000387	rbm17	100	78.302	ENSUMAG00000012237	RBM17	100	78.302	Ursus_maritimus
ENSMAMG00000000387	rbm17	100	71.393	ENSVPAG00000005497	RBM17	100	71.393	Vicugna_pacos
ENSMAMG00000000387	rbm17	100	76.590	ENSVVUG00000006780	RBM17	100	74.876	Vulpes_vulpes
ENSMAMG00000000387	rbm17	99	74.584	ENSXETG00000018123	rbm17	100	73.697	Xenopus_tropicalis
ENSMAMG00000000387	rbm17	100	90.974	ENSXMAG00000008674	rbm17	100	90.499	Xiphophorus_maculatus