EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000000470 (Gene tree)
Gene ID: 113140093
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 4775 bases
Position: chrOOHQ01000042.1:3262592-3267366
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000000724	MMR_HSR1	PF01926.23	7.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000000740	-	1860	-	ENSMAMP00000000724	619 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000000470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000000470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000000470	lsg1	68	31.651	ENSMAMG00000003554	gnl1	65	32.381
ENSMAMG00000000470	lsg1	52	30.769	ENSMAMG00000023332	gnl3l	55	32.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000000470	lsg1	99	62.576	ENSG00000041802	LSG1	98	74.713	Homo_sapiens
ENSMAMG00000000470	lsg1	100	78.268	ENSAPOG00000009694	lsg1	100	79.239	Acanthochromis_polyacanthus
ENSMAMG00000000470	lsg1	100	62.219	ENSAMEG00000009343	LSG1	100	62.519	Ailuropoda_melanoleuca
ENSMAMG00000000470	lsg1	98	82.258	ENSACIG00000012406	lsg1	100	81.833	Amphilophus_citrinellus
ENSMAMG00000000470	lsg1	100	78.268	ENSAOCG00000016066	lsg1	100	78.898	Amphiprion_ocellaris
ENSMAMG00000000470	lsg1	100	78.425	ENSAPEG00000003252	lsg1	100	78.515	Amphiprion_percula
ENSMAMG00000000470	lsg1	98	83.441	ENSATEG00000011794	lsg1	100	83.150	Anabas_testudineus
ENSMAMG00000000470	lsg1	95	59.425	ENSACAG00000004222	LSG1	100	59.968	Anolis_carolinensis
ENSMAMG00000000470	lsg1	99	62.745	ENSANAG00000021153	LSG1	99	63.788	Aotus_nancymaae
ENSMAMG00000000470	lsg1	100	79.511	ENSACLG00000000520	lsg1	100	79.511	Astatotilapia_calliptera
ENSMAMG00000000470	lsg1	100	69.697	ENSAMXG00000008271	lsg1	100	71.077	Astyanax_mexicanus
ENSMAMG00000000470	lsg1	99	63.678	ENSBTAG00000008461	LSG1	99	63.982	Bos_taurus
ENSMAMG00000000470	lsg1	77	42.526	WBGene00016907	C53H9.2	82	43.609	Caenorhabditis_elegans
ENSMAMG00000000470	lsg1	99	62.879	ENSCJAG00000013962	LSG1	99	63.636	Callithrix_jacchus
ENSMAMG00000000470	lsg1	95	62.992	ENSCAFG00000013445	LSG1	100	63.465	Canis_familiaris
ENSMAMG00000000470	lsg1	100	62.033	ENSCAFG00020002216	LSG1	100	62.725	Canis_lupus_dingo
ENSMAMG00000000470	lsg1	100	64.012	ENSCHIG00000015769	LSG1	100	64.012	Capra_hircus
ENSMAMG00000000470	lsg1	99	62.256	ENSTSYG00000001447	LSG1	99	62.991	Carlito_syrichta
ENSMAMG00000000470	lsg1	95	64.368	ENSCAPG00000009856	LSG1	99	64.274	Cavia_aperea
ENSMAMG00000000470	lsg1	99	62.443	ENSCCAG00000035744	LSG1	99	63.485	Cebus_capucinus
ENSMAMG00000000470	lsg1	99	62.105	ENSCATG00000042060	LSG1	99	61.725	Cercocebus_atys
ENSMAMG00000000470	lsg1	99	61.970	ENSCSAG00000008796	LSG1	92	62.727	Chlorocebus_sabaeus
ENSMAMG00000000470	lsg1	100	65.455	ENSCPBG00000015941	LSG1	83	65.758	Chrysemys_picta_bellii
ENSMAMG00000000470	lsg1	84	48.084	ENSCING00000007079	-	100	48.084	Ciona_intestinalis
ENSMAMG00000000470	lsg1	81	52.823	ENSCSAVG00000002514	-	97	52.823	Ciona_savignyi
ENSMAMG00000000470	lsg1	99	62.121	ENSCANG00000030709	LSG1	99	62.576	Colobus_angolensis_palliatus
ENSMAMG00000000470	lsg1	99	64.386	ENSCGRG00001019846	Lsg1	99	64.806	Cricetulus_griseus_chok1gshd
ENSMAMG00000000470	lsg1	99	63.594	ENSCGRG00000014617	Lsg1	99	64.055	Cricetulus_griseus_crigri
ENSMAMG00000000470	lsg1	98	78.041	ENSCSEG00000008522	lsg1	100	77.864	Cynoglossus_semilaevis
ENSMAMG00000000470	lsg1	98	77.207	ENSCVAG00000002484	lsg1	100	78.233	Cyprinodon_variegatus
ENSMAMG00000000470	lsg1	100	71.957	ENSDARG00000015352	lsg1	100	73.023	Danio_rerio
ENSMAMG00000000470	lsg1	99	62.840	ENSDNOG00000006224	LSG1	99	62.991	Dasypus_novemcinctus
ENSMAMG00000000470	lsg1	99	49.533	FBgn0266284	Ns3	99	50.158	Drosophila_melanogaster
ENSMAMG00000000470	lsg1	87	72.000	ENSETEG00000003888	LSG1	89	72.000	Echinops_telfairi
ENSMAMG00000000470	lsg1	88	56.529	ENSEBUG00000003119	lsg1	85	56.529	Eptatretus_burgeri
ENSMAMG00000000470	lsg1	99	63.086	ENSEASG00005000678	LSG1	99	63.229	Equus_asinus_asinus
ENSMAMG00000000470	lsg1	99	62.631	ENSECAG00000017659	LSG1	99	63.238	Equus_caballus
ENSMAMG00000000470	lsg1	86	62.712	ENSEEUG00000015217	LSG1	87	62.712	Erinaceus_europaeus
ENSMAMG00000000470	lsg1	100	72.756	ENSELUG00000023973	lsg1	100	72.756	Esox_lucius
ENSMAMG00000000470	lsg1	100	62.669	ENSFCAG00000024957	LSG1	100	63.118	Felis_catus
ENSMAMG00000000470	lsg1	93	60.383	ENSFALG00000007210	LSG1	94	60.543	Ficedula_albicollis
ENSMAMG00000000470	lsg1	99	62.346	ENSFDAG00000017373	LSG1	99	63.060	Fukomys_damarensis
ENSMAMG00000000470	lsg1	98	76.677	ENSFHEG00000003680	lsg1	100	76.361	Fundulus_heteroclitus
ENSMAMG00000000470	lsg1	89	80.658	ENSGMOG00000015834	lsg1	100	68.799	Gadus_morhua
ENSMAMG00000000470	lsg1	99	58.683	ENSGALG00000007058	LSG1	87	59.607	Gallus_gallus
ENSMAMG00000000470	lsg1	98	77.581	ENSGAFG00000015831	lsg1	100	77.358	Gambusia_affinis
ENSMAMG00000000470	lsg1	98	78.788	ENSGACG00000009323	lsg1	100	78.438	Gasterosteus_aculeatus
ENSMAMG00000000470	lsg1	99	62.879	ENSGGOG00000000520	LSG1	99	63.333	Gorilla_gorilla
ENSMAMG00000000470	lsg1	100	80.341	ENSHBUG00000005659	lsg1	100	80.341	Haplochromis_burtoni
ENSMAMG00000000470	lsg1	99	62.205	ENSHGLG00000017390	LSG1	99	62.205	Heterocephalus_glaber_female
ENSMAMG00000000470	lsg1	99	62.205	ENSHGLG00100018587	LSG1	99	62.205	Heterocephalus_glaber_male
ENSMAMG00000000470	lsg1	98	77.033	ENSHCOG00000016848	lsg1	100	76.672	Hippocampus_comes
ENSMAMG00000000470	lsg1	100	71.969	ENSIPUG00000008631	lsg1	100	71.969	Ictalurus_punctatus
ENSMAMG00000000470	lsg1	75	58.218	ENSSTOG00000010234	LSG1	92	58.614	Ictidomys_tridecemlineatus
ENSMAMG00000000470	lsg1	99	64.275	ENSJJAG00000015513	Lsg1	99	64.642	Jaculus_jaculus
ENSMAMG00000000470	lsg1	98	76.998	ENSKMAG00000009681	lsg1	100	76.677	Kryptolebias_marmoratus
ENSMAMG00000000470	lsg1	98	81.609	ENSLBEG00000024261	lsg1	100	81.350	Labrus_bergylta
ENSMAMG00000000470	lsg1	100	64.662	ENSLACG00000013399	LSG1	100	64.962	Latimeria_chalumnae
ENSMAMG00000000470	lsg1	98	72.457	ENSLOCG00000004918	lsg1	100	72.282	Lepisosteus_oculatus
ENSMAMG00000000470	lsg1	99	62.673	ENSLAFG00000012919	-	99	62.673	Loxodonta_africana
ENSMAMG00000000470	lsg1	99	62.256	ENSMFAG00000039903	LSG1	99	61.271	Macaca_fascicularis
ENSMAMG00000000470	lsg1	99	62.256	ENSMMUG00000010708	LSG1	99	62.121	Macaca_mulatta
ENSMAMG00000000470	lsg1	99	62.256	ENSMNEG00000031538	LSG1	99	61.212	Macaca_nemestrina
ENSMAMG00000000470	lsg1	99	62.105	ENSMLEG00000041184	LSG1	99	61.970	Mandrillus_leucophaeus
ENSMAMG00000000470	lsg1	100	80.186	ENSMZEG00005017865	lsg1	100	80.186	Maylandia_zebra
ENSMAMG00000000470	lsg1	88	60.302	ENSMGAG00000007050	LSG1	99	61.513	Meleagris_gallopavo
ENSMAMG00000000470	lsg1	90	63.311	ENSMAUG00000016976	Lsg1	93	63.884	Mesocricetus_auratus
ENSMAMG00000000470	lsg1	99	62.614	ENSMICG00000049087	LSG1	99	62.918	Microcebus_murinus
ENSMAMG00000000470	lsg1	99	63.872	ENSMOCG00000022136	Lsg1	99	63.720	Microtus_ochrogaster
ENSMAMG00000000470	lsg1	98	76.519	ENSMMOG00000008884	lsg1	100	77.170	Mola_mola
ENSMAMG00000000470	lsg1	99	55.247	ENSMODG00000019828	LSG1	98	55.796	Monodelphis_domestica
ENSMAMG00000000470	lsg1	100	63.748	MGP_CAROLIEiJ_G0020648	Lsg1	100	64.209	Mus_caroli
ENSMAMG00000000470	lsg1	100	63.594	ENSMUSG00000022538	Lsg1	100	64.055	Mus_musculus
ENSMAMG00000000470	lsg1	99	63.509	MGP_PahariEiJ_G0016352	Lsg1	100	63.872	Mus_pahari
ENSMAMG00000000470	lsg1	100	63.748	MGP_SPRETEiJ_G0021544	Lsg1	100	64.209	Mus_spretus
ENSMAMG00000000470	lsg1	100	61.976	ENSMPUG00000003734	LSG1	100	62.275	Mustela_putorius_furo
ENSMAMG00000000470	lsg1	100	62.387	ENSMLUG00000012548	LSG1	100	62.387	Myotis_lucifugus
ENSMAMG00000000470	lsg1	99	63.790	ENSNGAG00000021872	Lsg1	99	64.099	Nannospalax_galili
ENSMAMG00000000470	lsg1	99	62.121	ENSNLEG00000008293	LSG1	99	62.424	Nomascus_leucogenys
ENSMAMG00000000470	lsg1	71	72.165	ENSMEUG00000009041	-	84	72.165	Notamacropus_eugenii
ENSMAMG00000000470	lsg1	100	78.234	ENSONIG00000002635	lsg1	100	79.570	Oreochromis_niloticus
ENSMAMG00000000470	lsg1	95	66.451	ENSOANG00000012742	LSG1	99	66.451	Ornithorhynchus_anatinus
ENSMAMG00000000470	lsg1	99	62.556	ENSOCUG00000004817	LSG1	99	62.593	Oryctolagus_cuniculus
ENSMAMG00000000470	lsg1	98	79.508	ENSORLG00000007695	lsg1	100	79.133	Oryzias_latipes
ENSMAMG00000000470	lsg1	98	78.664	ENSORLG00020016286	lsg1	100	78.309	Oryzias_latipes_hni
ENSMAMG00000000470	lsg1	98	79.344	ENSORLG00015012025	lsg1	100	79.454	Oryzias_latipes_hsok
ENSMAMG00000000470	lsg1	98	78.560	ENSOMEG00000022379	lsg1	100	78.365	Oryzias_melastigma
ENSMAMG00000000470	lsg1	99	62.930	ENSOGAG00000003475	LSG1	99	63.229	Otolemur_garnettii
ENSMAMG00000000470	lsg1	100	63.333	ENSOARG00000020403	LSG1	100	63.636	Ovis_aries
ENSMAMG00000000470	lsg1	99	62.727	ENSPPAG00000029271	LSG1	99	62.727	Pan_paniscus
ENSMAMG00000000470	lsg1	100	62.018	ENSPPRG00000010281	LSG1	100	62.463	Panthera_pardus
ENSMAMG00000000470	lsg1	100	62.819	ENSPTIG00000010789	LSG1	100	63.268	Panthera_tigris_altaica
ENSMAMG00000000470	lsg1	99	62.576	ENSPTRG00000015760	LSG1	99	62.576	Pan_troglodytes
ENSMAMG00000000470	lsg1	99	62.105	ENSPANG00000018249	LSG1	99	61.120	Papio_anubis
ENSMAMG00000000470	lsg1	99	68.858	ENSPKIG00000002895	lsg1	99	70.561	Paramormyrops_kingsleyae
ENSMAMG00000000470	lsg1	96	62.794	ENSPSIG00000009821	LSG1	100	62.794	Pelodiscus_sinensis
ENSMAMG00000000470	lsg1	95	76.529	ENSPMGG00000000931	lsg1	100	76.529	Periophthalmus_magnuspinnatus
ENSMAMG00000000470	lsg1	99	62.121	ENSPEMG00000012082	-	99	61.504	Peromyscus_maniculatus_bairdii
ENSMAMG00000000470	lsg1	99	59.342	ENSPMAG00000007451	lsg1	99	59.342	Petromyzon_marinus
ENSMAMG00000000470	lsg1	100	63.402	ENSPCIG00000013890	LSG1	81	63.402	Phascolarctos_cinereus
ENSMAMG00000000470	lsg1	98	78.080	ENSPFOG00000021882	lsg1	100	77.847	Poecilia_formosa
ENSMAMG00000000470	lsg1	98	77.600	ENSPLAG00000019536	lsg1	100	77.379	Poecilia_latipinna
ENSMAMG00000000470	lsg1	98	77.033	ENSPMEG00000017281	lsg1	100	76.827	Poecilia_mexicana
ENSMAMG00000000470	lsg1	98	65.927	ENSPREG00000006048	lsg1	100	66.667	Poecilia_reticulata
ENSMAMG00000000470	lsg1	92	60.691	ENSPPYG00000014425	LSG1	100	60.691	Pongo_abelii
ENSMAMG00000000470	lsg1	81	72.000	ENSPCAG00000005511	LSG1	82	72.000	Procavia_capensis
ENSMAMG00000000470	lsg1	99	62.349	ENSPCOG00000012360	LSG1	99	62.500	Propithecus_coquereli
ENSMAMG00000000470	lsg1	100	79.511	ENSPNYG00000021994	lsg1	100	79.511	Pundamilia_nyererei
ENSMAMG00000000470	lsg1	100	72.981	ENSPNAG00000015533	lsg1	100	72.981	Pygocentrus_nattereri
ENSMAMG00000000470	lsg1	100	62.256	ENSRNOG00000001727	Lsg1	100	63.404	Rattus_norvegicus
ENSMAMG00000000470	lsg1	99	61.469	ENSRBIG00000029053	LSG1	99	62.519	Rhinopithecus_bieti
ENSMAMG00000000470	lsg1	99	61.469	ENSRROG00000037702	LSG1	99	62.519	Rhinopithecus_roxellana
ENSMAMG00000000470	lsg1	83	39.925	YGL099W	LSG1	75	40.267	Saccharomyces_cerevisiae
ENSMAMG00000000470	lsg1	99	62.896	ENSSBOG00000034938	LSG1	99	63.636	Saimiri_boliviensis_boliviensis
ENSMAMG00000000470	lsg1	77	61.333	ENSSHAG00000003487	LSG1	100	61.333	Sarcophilus_harrisii
ENSMAMG00000000470	lsg1	98	72.249	ENSSFOG00015008955	lsg1	100	72.231	Scleropages_formosus
ENSMAMG00000000470	lsg1	98	84.202	ENSSDUG00000004622	lsg1	100	83.746	Seriola_dumerili
ENSMAMG00000000470	lsg1	98	85.737	ENSSLDG00000010869	lsg1	100	85.238	Seriola_lalandi_dorsalis
ENSMAMG00000000470	lsg1	84	66.568	ENSSARG00000012981	LSG1	82	64.543	Sorex_araneus
ENSMAMG00000000470	lsg1	100	63.374	ENSSPUG00000016347	LSG1	100	63.374	Sphenodon_punctatus
ENSMAMG00000000470	lsg1	100	78.365	ENSSPAG00000005508	lsg1	100	79.294	Stegastes_partitus
ENSMAMG00000000470	lsg1	100	62.212	ENSSSCG00000011827	LSG1	100	62.058	Sus_scrofa
ENSMAMG00000000470	lsg1	89	59.302	ENSTGUG00000009068	LSG1	100	59.468	Taeniopygia_guttata
ENSMAMG00000000470	lsg1	98	74.277	ENSTRUG00000017380	lsg1	100	74.295	Takifugu_rubripes
ENSMAMG00000000470	lsg1	98	77.419	ENSTNIG00000015570	lsg1	100	77.551	Tetraodon_nigroviridis
ENSMAMG00000000470	lsg1	91	71.667	ENSTTRG00000000559	LSG1	91	71.667	Tursiops_truncatus
ENSMAMG00000000470	lsg1	100	62.613	ENSUAMG00000012454	LSG1	100	62.763	Ursus_americanus
ENSMAMG00000000470	lsg1	100	62.613	ENSUMAG00000000855	LSG1	100	62.763	Ursus_maritimus
ENSMAMG00000000470	lsg1	95	59.874	ENSVPAG00000012400	LSG1	100	59.874	Vicugna_pacos
ENSMAMG00000000470	lsg1	95	62.559	ENSVVUG00000008956	LSG1	99	61.203	Vulpes_vulpes
ENSMAMG00000000470	lsg1	100	66.974	ENSXETG00000003451	lsg1	100	67.347	Xenopus_tropicalis
ENSMAMG00000000470	lsg1	98	78.010	ENSXCOG00000003239	lsg1	100	77.778	Xiphophorus_couchianus
ENSMAMG00000000470	lsg1	98	78.013	ENSXMAG00000005536	lsg1	100	77.778	Xiphophorus_maculatus