EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000000564 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 19042 bases
Position: chrOOHQ01000107.1:11192052-11211093
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000000871	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000000890	-	4932	-	ENSMAMP00000000871	1643 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000000564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000000564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000000564	chd3	92	81.875	ENSMAMG00000002584	-	78	82.911
ENSMAMG00000000564	chd3	99	70.719	ENSMAMG00000002137	-	86	69.940
ENSMAMG00000000564	chd3	93	83.750	ENSMAMG00000018954	chd4a	79	83.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000000564	chd3	99	77.466	ENSG00000170004	CHD3	91	70.041	Homo_sapiens
ENSMAMG00000000564	chd3	99	90.097	ENSAPOG00000005614	chd3	97	90.097	Acanthochromis_polyacanthus
ENSMAMG00000000564	chd3	67	86.270	ENSAMEG00000003025	-	90	75.381	Ailuropoda_melanoleuca
ENSMAMG00000000564	chd3	97	95.773	ENSACIG00000019671	chd3	99	95.058	Amphilophus_citrinellus
ENSMAMG00000000564	chd3	99	92.617	ENSAOCG00000023784	chd3	99	92.617	Amphiprion_ocellaris
ENSMAMG00000000564	chd3	95	96.842	ENSAPEG00000006341	chd3	77	96.842	Amphiprion_percula
ENSMAMG00000000564	chd3	95	95.827	ENSATEG00000000848	chd3	99	90.231	Anabas_testudineus
ENSMAMG00000000564	chd3	95	83.420	ENSACAG00000004276	CHD3	77	83.420	Anolis_carolinensis
ENSMAMG00000000564	chd3	99	75.747	ENSANAG00000034323	CHD3	92	73.697	Aotus_nancymaae
ENSMAMG00000000564	chd3	99	89.371	ENSACLG00000009222	chd3	87	89.371	Astatotilapia_calliptera
ENSMAMG00000000564	chd3	99	76.377	ENSBTAG00000014377	CHD3	86	76.115	Bos_taurus
ENSMAMG00000000564	chd3	99	77.406	ENSCJAG00000014766	CHD3	84	76.748	Callithrix_jacchus
ENSMAMG00000000564	chd3	99	75.902	ENSCAFG00000016859	CHD3	85	75.480	Canis_familiaris
ENSMAMG00000000564	chd3	99	77.151	ENSCAFG00020007422	CHD3	92	75.539	Canis_lupus_dingo
ENSMAMG00000000564	chd3	99	75.146	ENSCHIG00000016737	CHD3	86	75.731	Capra_hircus
ENSMAMG00000000564	chd3	93	87.791	ENSTSYG00000035658	CHD3	92	72.216	Carlito_syrichta
ENSMAMG00000000564	chd3	99	72.913	ENSCAPG00000014864	CHD3	84	72.583	Cavia_aperea
ENSMAMG00000000564	chd3	99	75.394	ENSCPOG00000022653	CHD3	84	75.191	Cavia_porcellus
ENSMAMG00000000564	chd3	99	77.406	ENSCCAG00000034792	CHD3	85	75.630	Cebus_capucinus
ENSMAMG00000000564	chd3	99	77.243	ENSCATG00000041717	CHD3	84	76.681	Cercocebus_atys
ENSMAMG00000000564	chd3	99	77.289	ENSCLAG00000010523	CHD3	86	76.694	Chinchilla_lanigera
ENSMAMG00000000564	chd3	95	81.133	ENSCSAG00000011122	CHD3	86	75.379	Chlorocebus_sabaeus
ENSMAMG00000000564	chd3	93	93.151	ENSCPBG00000011966	CHD3	99	79.673	Chrysemys_picta_bellii
ENSMAMG00000000564	chd3	99	77.362	ENSCANG00000037641	CHD3	92	72.487	Colobus_angolensis_palliatus
ENSMAMG00000000564	chd3	99	76.219	ENSCGRG00001011306	Chd3	86	76.516	Cricetulus_griseus_chok1gshd
ENSMAMG00000000564	chd3	89	73.453	ENSCGRG00000007878	Chd3	82	73.413	Cricetulus_griseus_crigri
ENSMAMG00000000564	chd3	97	90.988	ENSCSEG00000004489	chd3	87	92.153	Cynoglossus_semilaevis
ENSMAMG00000000564	chd3	99	87.976	ENSCVAG00000007293	chd3	91	86.455	Cyprinodon_variegatus
ENSMAMG00000000564	chd3	99	84.939	ENSDARG00000021405	chd3	92	81.418	Danio_rerio
ENSMAMG00000000564	chd3	88	74.733	ENSDNOG00000047846	CHD3	77	75.516	Dasypus_novemcinctus
ENSMAMG00000000564	chd3	99	77.346	ENSDORG00000010713	Chd3	86	76.868	Dipodomys_ordii
ENSMAMG00000000564	chd3	93	86.047	ENSETEG00000017733	CHD3	88	71.404	Echinops_telfairi
ENSMAMG00000000564	chd3	74	86.709	ENSEBUG00000008310	chd3	84	74.977	Eptatretus_burgeri
ENSMAMG00000000564	chd3	99	76.171	ENSEASG00005019360	CHD3	92	76.023	Equus_asinus_asinus
ENSMAMG00000000564	chd3	99	76.374	ENSECAG00000010051	CHD3	92	76.023	Equus_caballus
ENSMAMG00000000564	chd3	89	90.722	ENSEEUG00000015205	CHD3	75	90.722	Erinaceus_europaeus
ENSMAMG00000000564	chd3	93	96.644	ENSELUG00000019499	chd3	99	96.644	Esox_lucius
ENSMAMG00000000564	chd3	99	75.698	ENSFCAG00000009629	CHD3	82	75.763	Felis_catus
ENSMAMG00000000564	chd3	99	76.612	ENSFDAG00000008220	CHD3	85	75.909	Fukomys_damarensis
ENSMAMG00000000564	chd3	91	91.099	ENSGMOG00000013599	chd3	79	91.099	Gadus_morhua
ENSMAMG00000000564	chd3	64	92.000	ENSGAFG00000004055	chd3	91	92.000	Gambusia_affinis
ENSMAMG00000000564	chd3	95	92.021	ENSGACG00000019275	chd3	87	80.334	Gasterosteus_aculeatus
ENSMAMG00000000564	chd3	83	82.812	ENSGAGG00000013164	CHD3	91	83.715	Gopherus_agassizii
ENSMAMG00000000564	chd3	99	77.211	ENSGGOG00000013496	CHD3	92	72.430	Gorilla_gorilla
ENSMAMG00000000564	chd3	99	77.170	ENSHGLG00000012017	CHD3	85	75.775	Heterocephalus_glaber_female
ENSMAMG00000000564	chd3	83	70.270	ENSHGLG00100013902	CHD3	83	70.270	Heterocephalus_glaber_male
ENSMAMG00000000564	chd3	95	91.577	ENSHCOG00000010170	chd3	79	91.792	Hippocampus_comes
ENSMAMG00000000564	chd3	93	93.711	ENSIPUG00000003271	chd3	93	82.635	Ictalurus_punctatus
ENSMAMG00000000564	chd3	99	77.262	ENSSTOG00000025907	CHD3	86	76.726	Ictidomys_tridecemlineatus
ENSMAMG00000000564	chd3	99	77.297	ENSJJAG00000017633	Chd3	86	76.526	Jaculus_jaculus
ENSMAMG00000000564	chd3	99	85.397	ENSKMAG00000019292	chd3	87	87.614	Kryptolebias_marmoratus
ENSMAMG00000000564	chd3	99	84.880	ENSLBEG00000028485	chd3	85	84.518	Labrus_bergylta
ENSMAMG00000000564	chd3	99	73.547	ENSLACG00000008031	CHD3	87	73.810	Latimeria_chalumnae
ENSMAMG00000000564	chd3	95	88.718	ENSLOCG00000013965	chd3	77	87.374	Lepisosteus_oculatus
ENSMAMG00000000564	chd3	99	73.669	ENSLAFG00000000572	CHD3	86	77.704	Loxodonta_africana
ENSMAMG00000000564	chd3	99	77.243	ENSMFAG00000020113	CHD3	92	73.399	Macaca_fascicularis
ENSMAMG00000000564	chd3	95	80.729	ENSMMUG00000022221	CHD3	85	74.342	Macaca_mulatta
ENSMAMG00000000564	chd3	99	77.243	ENSMNEG00000001728	CHD3	92	74.738	Macaca_nemestrina
ENSMAMG00000000564	chd3	99	77.243	ENSMLEG00000032249	CHD3	84	76.681	Mandrillus_leucophaeus
ENSMAMG00000000564	chd3	99	76.159	ENSMAUG00000013873	Chd3	92	74.046	Mesocricetus_auratus
ENSMAMG00000000564	chd3	93	87.209	ENSMICG00000008741	CHD3	85	73.147	Microcebus_murinus
ENSMAMG00000000564	chd3	99	76.544	ENSMOCG00000004848	Chd3	86	76.781	Microtus_ochrogaster
ENSMAMG00000000564	chd3	99	86.405	ENSMMOG00000012699	chd3	89	86.574	Mola_mola
ENSMAMG00000000564	chd3	99	77.251	ENSMODG00000007509	CHD3	92	77.172	Monodelphis_domestica
ENSMAMG00000000564	chd3	99	76.891	MGP_CAROLIEiJ_G0016564	Chd3	88	76.474	Mus_caroli
ENSMAMG00000000564	chd3	94	86.705	ENSMUSG00000018474	Chd3	88	76.159	Mus_musculus
ENSMAMG00000000564	chd3	94	86.705	MGP_PahariEiJ_G0017695	Chd3	88	76.502	Mus_pahari
ENSMAMG00000000564	chd3	94	86.705	MGP_SPRETEiJ_G0017400	Chd3	88	76.338	Mus_spretus
ENSMAMG00000000564	chd3	93	76.378	ENSMPUG00000008861	CHD3	92	75.910	Mustela_putorius_furo
ENSMAMG00000000564	chd3	94	82.065	ENSMLUG00000014643	-	85	75.175	Myotis_lucifugus
ENSMAMG00000000564	chd3	99	75.628	ENSNGAG00000000773	Chd3	84	75.454	Nannospalax_galili
ENSMAMG00000000564	chd3	99	88.767	ENSNBRG00000000636	chd3	97	88.767	Neolamprologus_brichardi
ENSMAMG00000000564	chd3	92	89.189	ENSNLEG00000009770	CHD3	88	73.318	Nomascus_leucogenys
ENSMAMG00000000564	chd3	84	87.209	ENSMEUG00000005852	CHD3	72	87.209	Notamacropus_eugenii
ENSMAMG00000000564	chd3	95	81.481	ENSOPRG00000011069	CHD3	90	75.191	Ochotona_princeps
ENSMAMG00000000564	chd3	99	76.257	ENSODEG00000017785	CHD3	85	75.556	Octodon_degus
ENSMAMG00000000564	chd3	95	96.392	ENSONIG00000009292	chd3	82	96.392	Oreochromis_niloticus
ENSMAMG00000000564	chd3	97	73.440	ENSOCUG00000029299	CHD3	85	72.387	Oryctolagus_cuniculus
ENSMAMG00000000564	chd3	90	84.462	ENSORLG00000007107	chd3	88	84.462	Oryzias_latipes
ENSMAMG00000000564	chd3	61	90.120	ENSORLG00020008387	chd3	86	90.818	Oryzias_latipes_hni
ENSMAMG00000000564	chd3	99	89.782	ENSOMEG00000013691	chd3	99	89.782	Oryzias_melastigma
ENSMAMG00000000564	chd3	99	76.171	ENSOGAG00000003216	CHD3	86	75.731	Otolemur_garnettii
ENSMAMG00000000564	chd3	95	80.421	ENSOARG00000017855	CHD3	84	75.163	Ovis_aries
ENSMAMG00000000564	chd3	95	80.729	ENSPPAG00000032886	CHD3	92	72.372	Pan_paniscus
ENSMAMG00000000564	chd3	99	77.165	ENSPPRG00000000626	CHD3	84	76.512	Panthera_pardus
ENSMAMG00000000564	chd3	99	77.466	ENSPTRG00000008714	CHD3	92	72.545	Pan_troglodytes
ENSMAMG00000000564	chd3	95	80.973	ENSPANG00000023938	CHD3	92	73.399	Papio_anubis
ENSMAMG00000000564	chd3	95	93.158	ENSPKIG00000006305	chd3	87	85.065	Paramormyrops_kingsleyae
ENSMAMG00000000564	chd3	65	81.586	ENSPSIG00000010177	CHD3	97	81.577	Pelodiscus_sinensis
ENSMAMG00000000564	chd3	99	75.806	ENSPEMG00000014262	Chd3	85	75.806	Peromyscus_maniculatus_bairdii
ENSMAMG00000000564	chd3	99	77.934	ENSPCIG00000005442	CHD3	93	77.134	Phascolarctos_cinereus
ENSMAMG00000000564	chd3	95	96.316	ENSPFOG00000012464	chd3	74	95.812	Poecilia_formosa
ENSMAMG00000000564	chd3	99	84.689	ENSPLAG00000002887	chd3	84	88.611	Poecilia_latipinna
ENSMAMG00000000564	chd3	61	89.400	ENSPMEG00000016725	chd3	83	89.400	Poecilia_mexicana
ENSMAMG00000000564	chd3	94	96.111	ENSPREG00000011044	chd3	86	94.319	Poecilia_reticulata
ENSMAMG00000000564	chd3	99	73.404	ENSPPYG00000007940	CHD3	86	72.468	Pongo_abelii
ENSMAMG00000000564	chd3	95	77.823	ENSPCAG00000004350	CHD3	83	78.479	Procavia_capensis
ENSMAMG00000000564	chd3	99	77.321	ENSPCOG00000020952	CHD3	85	75.465	Propithecus_coquereli
ENSMAMG00000000564	chd3	83	76.196	ENSPVAG00000016344	CHD3	73	76.253	Pteropus_vampyrus
ENSMAMG00000000564	chd3	95	94.737	ENSPNAG00000020393	chd3	92	89.363	Pygocentrus_nattereri
ENSMAMG00000000564	chd3	94	86.705	ENSRNOG00000009722	Chd3	92	75.367	Rattus_norvegicus
ENSMAMG00000000564	chd3	95	80.729	ENSRBIG00000033562	CHD3	92	73.134	Rhinopithecus_bieti
ENSMAMG00000000564	chd3	99	77.243	ENSRROG00000029554	CHD3	86	80.729	Rhinopithecus_roxellana
ENSMAMG00000000564	chd3	99	77.466	ENSSBOG00000020719	CHD3	92	75.103	Saimiri_boliviensis_boliviensis
ENSMAMG00000000564	chd3	99	77.433	ENSSHAG00000014412	CHD3	86	77.075	Sarcophilus_harrisii
ENSMAMG00000000564	chd3	90	92.818	ENSSFOG00015023123	chd3	89	83.622	Scleropages_formosus
ENSMAMG00000000564	chd3	95	96.842	ENSSMAG00000006451	chd3	99	91.606	Scophthalmus_maximus
ENSMAMG00000000564	chd3	59	92.784	ENSSDUG00000005792	chd3	87	92.784	Seriola_dumerili
ENSMAMG00000000564	chd3	95	97.368	ENSSPAG00000013694	chd3	99	91.381	Stegastes_partitus
ENSMAMG00000000564	chd3	93	90.798	ENSSSCG00000021363	CHD3	99	75.044	Sus_scrofa
ENSMAMG00000000564	chd3	83	91.301	ENSTRUG00000014990	chd3	85	89.514	Takifugu_rubripes
ENSMAMG00000000564	chd3	99	88.621	ENSTNIG00000012998	chd3	86	88.501	Tetraodon_nigroviridis
ENSMAMG00000000564	chd3	71	90.722	ENSTBEG00000011454	-	67	90.722	Tupaia_belangeri
ENSMAMG00000000564	chd3	98	76.797	ENSTTRG00000010295	CHD3	83	76.876	Tursiops_truncatus
ENSMAMG00000000564	chd3	94	86.705	ENSUAMG00000005475	CHD3	92	74.284	Ursus_americanus
ENSMAMG00000000564	chd3	55	90.093	ENSVPAG00000010794	-	53	90.093	Vicugna_pacos
ENSMAMG00000000564	chd3	99	77.151	ENSVVUG00000028011	CHD3	89	75.539	Vulpes_vulpes
ENSMAMG00000000564	chd3	99	70.035	ENSXETG00000012991	chd3	83	69.800	Xenopus_tropicalis
ENSMAMG00000000564	chd3	58	93.092	ENSXCOG00000000809	chd3	85	93.303	Xiphophorus_couchianus
ENSMAMG00000000564	chd3	95	93.265	ENSXMAG00000016035	chd3	99	93.265	Xiphophorus_maculatus