EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000000933 (Gene tree)
Gene ID: 113139112
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 14861 bases
Position: chrOOHQ01000039.1:16662526-16677386
Accession: 113139112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000001294	ResIII	PF04851.15	4.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000001321	-	7597	-	ENSMAMP00000001294	1046 (aa)	XP_026177879	UPI000E4614CD

Gene Model

Click here to download ENSMAMG00000000933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000000933's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000000933	smarcad1a	51	37.153	ENSMAMG00000012822	chd1l	56	37.153

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000000933	smarcad1a	94	63.561	ENSG00000163104	SMARCAD1	99	68.182	Homo_sapiens
ENSMAMG00000000933	smarcad1a	100	80.337	ENSAPOG00000011446	smarcad1a	100	80.431	Acanthochromis_polyacanthus
ENSMAMG00000000933	smarcad1a	68	63.245	ENSAMEG00000005844	SMARCAD1	69	63.421	Ailuropoda_melanoleuca
ENSMAMG00000000933	smarcad1a	67	89.189	ENSACIG00000018326	smarcad1a	100	92.000	Amphilophus_citrinellus
ENSMAMG00000000933	smarcad1a	100	81.402	ENSAOCG00000019762	smarcad1a	100	81.495	Amphiprion_ocellaris
ENSMAMG00000000933	smarcad1a	100	81.776	ENSAPEG00000003889	smarcad1a	100	81.589	Amphiprion_percula
ENSMAMG00000000933	smarcad1a	94	82.076	ENSATEG00000015608	smarcad1a	99	83.893	Anabas_testudineus
ENSMAMG00000000933	smarcad1a	87	67.119	ENSAPLG00000004630	SMARCAD1	88	64.345	Anas_platyrhynchos
ENSMAMG00000000933	smarcad1a	63	66.114	ENSACAG00000013554	SMARCAD1	64	66.114	Anolis_carolinensis
ENSMAMG00000000933	smarcad1a	92	63.107	ENSANAG00000020488	SMARCAD1	98	63.459	Aotus_nancymaae
ENSMAMG00000000933	smarcad1a	100	79.131	ENSACLG00000017063	smarcad1a	100	79.981	Astatotilapia_calliptera
ENSMAMG00000000933	smarcad1a	74	69.780	ENSAMXG00000019130	smarcad1b	85	69.780	Astyanax_mexicanus
ENSMAMG00000000933	smarcad1a	67	69.307	ENSAMXG00000015470	smarcad1a	98	69.307	Astyanax_mexicanus
ENSMAMG00000000933	smarcad1a	68	62.656	ENSBTAG00000017061	SMARCAD1	69	62.829	Bos_taurus
ENSMAMG00000000933	smarcad1a	63	40.841	WBGene00010845	M03C11.8	71	39.776	Caenorhabditis_elegans
ENSMAMG00000000933	smarcad1a	92	63.561	ENSCJAG00000006778	SMARCAD1	98	63.738	Callithrix_jacchus
ENSMAMG00000000933	smarcad1a	83	63.384	ENSCAFG00000010026	SMARCAD1	82	63.561	Canis_familiaris
ENSMAMG00000000933	smarcad1a	86	63.384	ENSCAFG00020003994	SMARCAD1	97	63.561	Canis_lupus_dingo
ENSMAMG00000000933	smarcad1a	68	62.968	ENSCHIG00000012905	SMARCAD1	69	63.143	Capra_hircus
ENSMAMG00000000933	smarcad1a	92	63.421	ENSTSYG00000002706	SMARCAD1	98	63.598	Carlito_syrichta
ENSMAMG00000000933	smarcad1a	81	54.964	ENSCAPG00000016744	SMARCAD1	86	55.620	Cavia_aperea
ENSMAMG00000000933	smarcad1a	86	62.813	ENSCPOG00000011398	SMARCAD1	98	62.849	Cavia_porcellus
ENSMAMG00000000933	smarcad1a	92	63.700	ENSCCAG00000022264	SMARCAD1	99	68.350	Cebus_capucinus
ENSMAMG00000000933	smarcad1a	96	63.561	ENSCATG00000035663	SMARCAD1	98	64.253	Cercocebus_atys
ENSMAMG00000000933	smarcad1a	84	63.561	ENSCSAG00000004186	SMARCAD1	98	63.738	Chlorocebus_sabaeus
ENSMAMG00000000933	smarcad1a	62	50.305	ENSCING00000001688	-	98	50.305	Ciona_intestinalis
ENSMAMG00000000933	smarcad1a	96	63.421	ENSCANG00000003556	SMARCAD1	99	68.182	Colobus_angolensis_palliatus
ENSMAMG00000000933	smarcad1a	94	62.674	ENSCGRG00001015056	Smarcad1	98	62.674	Cricetulus_griseus_chok1gshd
ENSMAMG00000000933	smarcad1a	94	62.674	ENSCGRG00000014087	Smarcad1	98	62.674	Cricetulus_griseus_crigri
ENSMAMG00000000933	smarcad1a	100	72.176	ENSCSEG00000017903	smarcad1a	100	72.082	Cynoglossus_semilaevis
ENSMAMG00000000933	smarcad1a	100	72.233	ENSCSEG00000014419	-	100	71.693	Cynoglossus_semilaevis
ENSMAMG00000000933	smarcad1a	100	57.875	ENSDARG00000014041	smarcad1a	100	58.168	Danio_rerio
ENSMAMG00000000933	smarcad1a	72	75.115	ENSDARG00000073721	smarcad1b	85	62.150	Danio_rerio
ENSMAMG00000000933	smarcad1a	96	61.667	ENSDORG00000012331	Smarcad1	99	61.667	Dipodomys_ordii
ENSMAMG00000000933	smarcad1a	61	44.885	FBgn0032157	Etl1	82	44.034	Drosophila_melanogaster
ENSMAMG00000000933	smarcad1a	59	47.874	ENSEBUG00000003969	smarcad1a	97	48.083	Eptatretus_burgeri
ENSMAMG00000000933	smarcad1a	96	63.245	ENSEASG00005012382	SMARCAD1	98	63.421	Equus_asinus_asinus
ENSMAMG00000000933	smarcad1a	96	63.245	ENSECAG00000011562	SMARCAD1	98	63.421	Equus_caballus
ENSMAMG00000000933	smarcad1a	84	59.774	ENSELUG00000019154	smarcad1b	82	67.500	Esox_lucius
ENSMAMG00000000933	smarcad1a	100	68.178	ENSELUG00000018535	smarcad1a	70	79.635	Esox_lucius
ENSMAMG00000000933	smarcad1a	68	63.523	ENSFCAG00000003958	SMARCAD1	99	68.687	Felis_catus
ENSMAMG00000000933	smarcad1a	94	63.049	ENSFALG00000006089	SMARCAD1	96	65.801	Ficedula_albicollis
ENSMAMG00000000933	smarcad1a	68	63.231	ENSFDAG00000017027	SMARCAD1	69	63.268	Fukomys_damarensis
ENSMAMG00000000933	smarcad1a	100	70.647	ENSFHEG00000012778	smarcad1a	100	69.982	Fundulus_heteroclitus
ENSMAMG00000000933	smarcad1a	84	81.180	ENSGMOG00000018995	smarcad1a	99	81.180	Gadus_morhua
ENSMAMG00000000933	smarcad1a	78	60.858	ENSGALG00000037339	SMARCAD1	93	60.349	Gallus_gallus
ENSMAMG00000000933	smarcad1a	100	69.419	ENSGAFG00000013498	smarcad1a	69	76.350	Gambusia_affinis
ENSMAMG00000000933	smarcad1a	86	86.351	ENSGACG00000007327	smarcad1a	99	86.957	Gasterosteus_aculeatus
ENSMAMG00000000933	smarcad1a	91	55.729	ENSGAGG00000008582	SMARCAD1	68	65.616	Gopherus_agassizii
ENSMAMG00000000933	smarcad1a	96	63.561	ENSGGOG00000023001	SMARCAD1	98	63.738	Gorilla_gorilla
ENSMAMG00000000933	smarcad1a	100	79.037	ENSHBUG00000011042	smarcad1a	100	79.887	Haplochromis_burtoni
ENSMAMG00000000933	smarcad1a	96	63.231	ENSHGLG00000005070	SMARCAD1	98	63.268	Heterocephalus_glaber_female
ENSMAMG00000000933	smarcad1a	96	63.231	ENSHGLG00100006812	SMARCAD1	98	63.268	Heterocephalus_glaber_male
ENSMAMG00000000933	smarcad1a	100	63.782	ENSHCOG00000007848	smarcad1a	100	63.718	Hippocampus_comes
ENSMAMG00000000933	smarcad1a	72	73.579	ENSIPUG00000022817	smarcad1b	99	56.733	Ictalurus_punctatus
ENSMAMG00000000933	smarcad1a	99	56.876	ENSIPUG00000000242	smarcad1a	96	60.581	Ictalurus_punctatus
ENSMAMG00000000933	smarcad1a	68	62.552	ENSSTOG00000001227	SMARCAD1	69	62.726	Ictidomys_tridecemlineatus
ENSMAMG00000000933	smarcad1a	94	62.277	ENSJJAG00000022342	Smarcad1	99	62.656	Jaculus_jaculus
ENSMAMG00000000933	smarcad1a	99	76.376	ENSKMAG00000021351	smarcad1a	99	76.281	Kryptolebias_marmoratus
ENSMAMG00000000933	smarcad1a	100	78.571	ENSLBEG00000008088	smarcad1a	99	78.782	Labrus_bergylta
ENSMAMG00000000933	smarcad1a	85	76.625	ENSLOCG00000012909	smarcad1a	96	74.743	Lepisosteus_oculatus
ENSMAMG00000000933	smarcad1a	68	61.581	ENSLAFG00000000040	SMARCAD1	69	61.752	Loxodonta_africana
ENSMAMG00000000933	smarcad1a	96	63.561	ENSMFAG00000042606	SMARCAD1	98	63.738	Macaca_fascicularis
ENSMAMG00000000933	smarcad1a	88	63.561	ENSMMUG00000022242	SMARCAD1	97	63.738	Macaca_mulatta
ENSMAMG00000000933	smarcad1a	96	63.561	ENSMNEG00000038117	SMARCAD1	99	68.182	Macaca_nemestrina
ENSMAMG00000000933	smarcad1a	96	63.561	ENSMLEG00000038333	SMARCAD1	99	68.182	Mandrillus_leucophaeus
ENSMAMG00000000933	smarcad1a	100	77.432	ENSMZEG00005005203	smarcad1a	100	78.281	Maylandia_zebra
ENSMAMG00000000933	smarcad1a	82	65.312	ENSMGAG00000005577	SMARCAD1	89	65.312	Meleagris_gallopavo
ENSMAMG00000000933	smarcad1a	92	61.728	ENSMAUG00000008417	Smarcad1	98	62.430	Mesocricetus_auratus
ENSMAMG00000000933	smarcad1a	65	64.680	ENSMICG00000009746	SMARCAD1	67	64.680	Microcebus_murinus
ENSMAMG00000000933	smarcad1a	68	63.092	ENSMOCG00000017142	Smarcad1	69	63.092	Microtus_ochrogaster
ENSMAMG00000000933	smarcad1a	71	86.982	ENSMMOG00000000275	smarcad1a	100	86.982	Mola_mola
ENSMAMG00000000933	smarcad1a	90	54.478	ENSMODG00000019268	SMARCAD1	75	68.643	Monodelphis_domestica
ENSMAMG00000000933	smarcad1a	87	54.723	MGP_CAROLIEiJ_G0028458	-	65	62.953	Mus_caroli
ENSMAMG00000000933	smarcad1a	68	62.953	ENSMUSG00000029920	Smarcad1	69	62.953	Mus_musculus
ENSMAMG00000000933	smarcad1a	68	62.953	MGP_PahariEiJ_G0022198	Smarcad1	69	62.953	Mus_pahari
ENSMAMG00000000933	smarcad1a	68	62.953	MGP_SPRETEiJ_G0029462	Smarcad1	69	62.953	Mus_spretus
ENSMAMG00000000933	smarcad1a	68	63.245	ENSMPUG00000002111	SMARCAD1	69	63.421	Mustela_putorius_furo
ENSMAMG00000000933	smarcad1a	68	62.222	ENSMLUG00000000425	SMARCAD1	69	62.396	Myotis_lucifugus
ENSMAMG00000000933	smarcad1a	76	80.491	ENSNBRG00000012749	smarcad1a	91	84.052	Neolamprologus_brichardi
ENSMAMG00000000933	smarcad1a	96	63.561	ENSNLEG00000014225	SMARCAD1	99	68.182	Nomascus_leucogenys
ENSMAMG00000000933	smarcad1a	96	62.813	ENSODEG00000004334	SMARCAD1	98	62.849	Octodon_degus
ENSMAMG00000000933	smarcad1a	85	89.392	ENSONIG00000015059	smarcad1a	100	84.928	Oreochromis_niloticus
ENSMAMG00000000933	smarcad1a	72	67.620	ENSOANG00000013764	SMARCAD1	92	67.012	Ornithorhynchus_anatinus
ENSMAMG00000000933	smarcad1a	96	62.674	ENSOCUG00000017283	SMARCAD1	98	62.674	Oryctolagus_cuniculus
ENSMAMG00000000933	smarcad1a	100	72.744	ENSORLG00000004869	smarcad1a	100	72.217	Oryzias_latipes
ENSMAMG00000000933	smarcad1a	100	72.744	ENSORLG00020020569	smarcad1a	100	72.217	Oryzias_latipes_hni
ENSMAMG00000000933	smarcad1a	100	72.650	ENSORLG00015009045	smarcad1a	100	72.123	Oryzias_latipes_hsok
ENSMAMG00000000933	smarcad1a	99	71.239	ENSOMEG00000023032	smarcad1a	100	71.334	Oryzias_melastigma
ENSMAMG00000000933	smarcad1a	92	62.829	ENSOGAG00000011444	SMARCAD1	98	63.004	Otolemur_garnettii
ENSMAMG00000000933	smarcad1a	68	62.968	ENSOARG00000017851	SMARCAD1	69	63.143	Ovis_aries
ENSMAMG00000000933	smarcad1a	96	63.561	ENSPPAG00000035715	SMARCAD1	98	63.738	Pan_paniscus
ENSMAMG00000000933	smarcad1a	56	68.687	ENSPPRG00000024756	SMARCAD1	99	68.687	Panthera_pardus
ENSMAMG00000000933	smarcad1a	96	63.561	ENSPTRG00000023126	SMARCAD1	99	68.182	Pan_troglodytes
ENSMAMG00000000933	smarcad1a	96	62.188	ENSPANG00000019757	SMARCAD1	98	63.538	Papio_anubis
ENSMAMG00000000933	smarcad1a	69	63.329	ENSPSIG00000010255	SMARCAD1	68	65.576	Pelodiscus_sinensis
ENSMAMG00000000933	smarcad1a	61	78.106	ENSPMGG00000010735	smarcad1a	97	76.246	Periophthalmus_magnuspinnatus
ENSMAMG00000000933	smarcad1a	96	55.292	ENSPEMG00000001854	Smarcad1	98	55.278	Peromyscus_maniculatus_bairdii
ENSMAMG00000000933	smarcad1a	91	55.130	ENSPMAG00000003516	smarcad1a	97	55.448	Petromyzon_marinus
ENSMAMG00000000933	smarcad1a	72	66.569	ENSPCIG00000008137	SMARCAD1	89	66.667	Phascolarctos_cinereus
ENSMAMG00000000933	smarcad1a	100	71.844	ENSPFOG00000019116	smarcad1a	100	67.931	Poecilia_formosa
ENSMAMG00000000933	smarcad1a	100	72.025	ENSPLAG00000000108	smarcad1a	100	68.112	Poecilia_latipinna
ENSMAMG00000000933	smarcad1a	100	72.025	ENSPMEG00000009155	smarcad1a	100	68.112	Poecilia_mexicana
ENSMAMG00000000933	smarcad1a	100	74.482	ENSPREG00000018185	smarcad1a	100	73.640	Poecilia_reticulata
ENSMAMG00000000933	smarcad1a	96	62.968	ENSPPYG00000014935	SMARCAD1	98	63.143	Pongo_abelii
ENSMAMG00000000933	smarcad1a	94	62.361	ENSPVAG00000001760	SMARCAD1	98	62.535	Pteropus_vampyrus
ENSMAMG00000000933	smarcad1a	76	80.297	ENSPNYG00000010087	smarcad1a	92	82.965	Pundamilia_nyererei
ENSMAMG00000000933	smarcad1a	83	63.158	ENSPNAG00000010099	smarcad1b	83	69.958	Pygocentrus_nattereri
ENSMAMG00000000933	smarcad1a	100	60.038	ENSPNAG00000001663	smarcad1a	100	59.564	Pygocentrus_nattereri
ENSMAMG00000000933	smarcad1a	68	62.813	ENSRNOG00000006391	Smarcad1	69	62.813	Rattus_norvegicus
ENSMAMG00000000933	smarcad1a	96	63.561	ENSRBIG00000041989	SMARCAD1	98	63.738	Rhinopithecus_bieti
ENSMAMG00000000933	smarcad1a	96	63.561	ENSRROG00000035309	SMARCAD1	98	63.738	Rhinopithecus_roxellana
ENSMAMG00000000933	smarcad1a	92	63.700	ENSSBOG00000032114	SMARCAD1	99	68.350	Saimiri_boliviensis_boliviensis
ENSMAMG00000000933	smarcad1a	64	66.963	ENSSHAG00000001279	SMARCAD1	65	66.963	Sarcophilus_harrisii
ENSMAMG00000000933	smarcad1a	100	59.831	ENSSFOG00015016814	smarcad1b	68	74.892	Scleropages_formosus
ENSMAMG00000000933	smarcad1a	67	70.927	ENSSFOG00015020909	smarcad1a	94	70.927	Scleropages_formosus
ENSMAMG00000000933	smarcad1a	100	81.151	ENSSMAG00000001326	smarcad1a	100	81.430	Scophthalmus_maximus
ENSMAMG00000000933	smarcad1a	77	82.614	ENSSDUG00000022338	smarcad1a	93	86.097	Seriola_dumerili
ENSMAMG00000000933	smarcad1a	100	79.330	ENSSLDG00000024986	smarcad1a	100	80.392	Seriola_lalandi_dorsalis
ENSMAMG00000000933	smarcad1a	56	70.420	ENSSPUG00000004633	SMARCAD1	99	70.420	Sphenodon_punctatus
ENSMAMG00000000933	smarcad1a	100	80.952	ENSSPAG00000001970	smarcad1a	100	81.537	Stegastes_partitus
ENSMAMG00000000933	smarcad1a	92	63.245	ENSSSCG00000009193	SMARCAD1	98	63.421	Sus_scrofa
ENSMAMG00000000933	smarcad1a	77	62.772	ENSTGUG00000003127	SMARCAD1	96	65.070	Taeniopygia_guttata
ENSMAMG00000000933	smarcad1a	91	78.868	ENSTNIG00000017585	smarcad1a	99	85.154	Tetraodon_nigroviridis
ENSMAMG00000000933	smarcad1a	79	70.238	ENSTBEG00000002789	SMARCAD1	86	70.238	Tupaia_belangeri
ENSMAMG00000000933	smarcad1a	83	63.158	ENSTTRG00000000226	SMARCAD1	86	63.333	Tursiops_truncatus
ENSMAMG00000000933	smarcad1a	76	55.767	ENSUAMG00000022262	SMARCAD1	84	58.196	Ursus_americanus
ENSMAMG00000000933	smarcad1a	68	63.245	ENSUMAG00000004549	SMARCAD1	69	63.421	Ursus_maritimus
ENSMAMG00000000933	smarcad1a	81	62.158	ENSVVUG00000007271	SMARCAD1	99	62.707	Vulpes_vulpes
ENSMAMG00000000933	smarcad1a	89	51.528	ENSXETG00000019214	smarcad1	100	59.637	Xenopus_tropicalis
ENSMAMG00000000933	smarcad1a	80	83.115	ENSXCOG00000005232	smarcad1a	88	83.115	Xiphophorus_couchianus
ENSMAMG00000000933	smarcad1a	100	71.506	ENSXMAG00000015350	smarcad1a	100	66.033	Xiphophorus_maculatus