EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000001031 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 27168 bases
Position: chrOOHQ01000028.1:12035082-12062249
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000001420	zf-met	PF12874.7	1e-14	1	2
ENSMAMP00000001420	zf-met	PF12874.7	1e-14	2	2
ENSMAMP00000001431	zf-met	PF12874.7	1.1e-14	1	2
ENSMAMP00000001431	zf-met	PF12874.7	1.1e-14	2	2
ENSMAMP00000001420	zf-C2H2_jaz	PF12171.8	3.6e-10	1	1
ENSMAMP00000001431	zf-C2H2_jaz	PF12171.8	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000001451	-	510	-	ENSMAMP00000001420	169 (aa)	-	-
ENSMAMT00000001462	-	1178	-	ENSMAMP00000001431	159 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000001031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000001031's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000001031	zgc:171482	92	55.621	ENSMAMG00000019914	zmat4a	81	67.742
ENSMAMG00000001031	zgc:171482	94	47.863	ENSMAMG00000020140	znf346	71	47.863

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000001031	zgc:171482	81	95.349	ENSAPOG00000019970	zgc:171482	99	96.774	Acanthochromis_polyacanthus
ENSMAMG00000001031	zgc:171482	75	96.667	ENSACIG00000021512	zgc:171482	98	90.076	Amphilophus_citrinellus
ENSMAMG00000001031	zgc:171482	78	95.968	ENSAOCG00000000751	zgc:171482	95	93.023	Amphiprion_ocellaris
ENSMAMG00000001031	zgc:171482	87	92.086	ENSAPEG00000014154	zgc:171482	100	92.086	Amphiprion_percula
ENSMAMG00000001031	zgc:171482	72	96.522	ENSATEG00000001371	zgc:171482	88	94.215	Anabas_testudineus
ENSMAMG00000001031	zgc:171482	82	93.130	ENSACLG00000010511	zgc:171482	91	93.130	Astatotilapia_calliptera
ENSMAMG00000001031	zgc:171482	92	92.793	ENSAMXG00000002299	zgc:171482	99	86.885	Astyanax_mexicanus
ENSMAMG00000001031	zgc:171482	75	94.167	ENSCSEG00000006509	zgc:171482	78	94.167	Cynoglossus_semilaevis
ENSMAMG00000001031	zgc:171482	80	97.521	ENSCVAG00000013606	zgc:171482	99	87.770	Cyprinodon_variegatus
ENSMAMG00000001031	zgc:171482	94	89.256	ENSDARG00000074415	zgc:171482	97	89.256	Danio_rerio
ENSMAMG00000001031	zgc:171482	97	57.692	ENSELUG00000017517	-	60	85.393	Esox_lucius
ENSMAMG00000001031	zgc:171482	83	87.121	ENSELUG00000021817	zgc:171482	94	90.000	Esox_lucius
ENSMAMG00000001031	zgc:171482	82	96.154	ENSFHEG00000002233	zgc:171482	99	95.868	Fundulus_heteroclitus
ENSMAMG00000001031	zgc:171482	79	92.800	ENSGMOG00000010508	zgc:171482	99	92.800	Gadus_morhua
ENSMAMG00000001031	zgc:171482	75	97.500	ENSGAFG00000009398	zgc:171482	78	97.500	Gambusia_affinis
ENSMAMG00000001031	zgc:171482	79	95.200	ENSGACG00000007680	zgc:171482	99	88.489	Gasterosteus_aculeatus
ENSMAMG00000001031	zgc:171482	84	92.481	ENSHBUG00000023289	zgc:171482	100	92.481	Haplochromis_burtoni
ENSMAMG00000001031	zgc:171482	78	88.889	ENSHCOG00000018086	zgc:171482	99	84.962	Hippocampus_comes
ENSMAMG00000001031	zgc:171482	74	92.373	ENSIPUG00000000361	zgc:171482	86	92.373	Ictalurus_punctatus
ENSMAMG00000001031	zgc:171482	79	95.200	ENSKMAG00000005077	zgc:171482	89	95.200	Kryptolebias_marmoratus
ENSMAMG00000001031	zgc:171482	84	91.791	ENSLBEG00000023823	zgc:171482	96	91.791	Labrus_bergylta
ENSMAMG00000001031	zgc:171482	92	90.083	ENSLOCG00000008863	zgc:171482	96	90.083	Lepisosteus_oculatus
ENSMAMG00000001031	zgc:171482	83	82.576	ENSMZEG00005027721	zgc:171482	99	89.167	Maylandia_zebra
ENSMAMG00000001031	zgc:171482	80	97.638	ENSMMOG00000010523	zgc:171482	97	97.638	Mola_mola
ENSMAMG00000001031	zgc:171482	77	95.122	ENSMALG00000017883	zgc:171482	99	95.122	Monopterus_albus
ENSMAMG00000001031	zgc:171482	76	93.388	ENSNBRG00000021035	zgc:171482	90	93.388	Neolamprologus_brichardi
ENSMAMG00000001031	zgc:171482	79	93.651	ENSONIG00000018365	zgc:171482	97	93.651	Oreochromis_niloticus
ENSMAMG00000001031	zgc:171482	94	97.436	ENSORLG00000007607	zgc:171482	99	87.943	Oryzias_latipes
ENSMAMG00000001031	zgc:171482	94	92.373	ENSORLG00020003563	zgc:171482	99	92.373	Oryzias_latipes_hni
ENSMAMG00000001031	zgc:171482	94	97.436	ENSORLG00015008552	zgc:171482	99	87.943	Oryzias_latipes_hsok
ENSMAMG00000001031	zgc:171482	89	88.652	ENSOMEG00000003526	zgc:171482	99	88.652	Oryzias_melastigma
ENSMAMG00000001031	zgc:171482	77	91.129	ENSPKIG00000015911	-	86	91.129	Paramormyrops_kingsleyae
ENSMAMG00000001031	zgc:171482	69	90.000	ENSPKIG00000016244	zgc:171482	95	77.206	Paramormyrops_kingsleyae
ENSMAMG00000001031	zgc:171482	79	93.600	ENSPMGG00000020230	zgc:171482	82	93.600	Periophthalmus_magnuspinnatus
ENSMAMG00000001031	zgc:171482	80	96.850	ENSPFOG00000001974	zgc:171482	96	96.800	Poecilia_formosa
ENSMAMG00000001031	zgc:171482	80	95.276	ENSPLAG00000003327	zgc:171482	99	96.800	Poecilia_latipinna
ENSMAMG00000001031	zgc:171482	81	96.124	ENSPMEG00000004988	zgc:171482	99	87.302	Poecilia_mexicana
ENSMAMG00000001031	zgc:171482	87	89.855	ENSPREG00000019241	zgc:171482	100	89.855	Poecilia_reticulata
ENSMAMG00000001031	zgc:171482	82	93.130	ENSPNYG00000007773	zgc:171482	91	93.130	Pundamilia_nyererei
ENSMAMG00000001031	zgc:171482	72	93.043	ENSPNAG00000007619	zgc:171482	79	88.800	Pygocentrus_nattereri
ENSMAMG00000001031	zgc:171482	74	88.034	ENSSFOG00015016149	zgc:171482	94	88.034	Scleropages_formosus
ENSMAMG00000001031	zgc:171482	79	84.921	ENSSFOG00015021238	zgc:171482	98	74.172	Scleropages_formosus
ENSMAMG00000001031	zgc:171482	90	90.210	ENSSMAG00000002715	zgc:171482	92	90.210	Scophthalmus_maximus
ENSMAMG00000001031	zgc:171482	82	95.385	ENSSDUG00000008773	zgc:171482	92	95.385	Seriola_dumerili
ENSMAMG00000001031	zgc:171482	82	95.385	ENSSLDG00000019510	zgc:171482	92	95.385	Seriola_lalandi_dorsalis
ENSMAMG00000001031	zgc:171482	78	97.581	ENSSPAG00000013724	zgc:171482	100	96.032	Stegastes_partitus
ENSMAMG00000001031	zgc:171482	81	89.147	ENSTRUG00000005705	zgc:171482	82	83.333	Takifugu_rubripes
ENSMAMG00000001031	zgc:171482	94	68.939	ENSTNIG00000008679	zgc:171482	99	67.407	Tetraodon_nigroviridis
ENSMAMG00000001031	zgc:171482	62	91.111	ENSXETG00000013525	zmat4	75	91.111	Xenopus_tropicalis
ENSMAMG00000001031	zgc:171482	75	88.430	ENSXMAG00000002641	zgc:171482	78	88.430	Xiphophorus_maculatus