EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000001046 (Gene tree)
Gene ID: 113144808
Gene Symbol: -
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 15970 bases
Position: chrOOHQ01000077.1:25284242-25300211
Accession: 113144808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000001444	SLBP_RNA_bind	PF15247.6	2.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000001475	-	1879	-	ENSMAMP00000001444	281 (aa)	XP_026186821	UPI000E45E28E

Gene Model

Click here to download ENSMAMG00000001046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000001046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000001046	-	87	48.077	ENSG00000163950	SLBP	88	47.805	Homo_sapiens
ENSMAMG00000001046	-	99	76.429	ENSAPOG00000004953	slbp	99	76.429	Acanthochromis_polyacanthus
ENSMAMG00000001046	-	57	57.396	ENSAMEG00000016915	SLBP	91	51.643	Ailuropoda_melanoleuca
ENSMAMG00000001046	-	92	72.093	ENSACIG00000022308	slbp	95	72.093	Amphilophus_citrinellus
ENSMAMG00000001046	-	99	76.429	ENSAOCG00000024545	slbp	99	76.429	Amphiprion_ocellaris
ENSMAMG00000001046	-	99	77.143	ENSAPEG00000017629	slbp	99	77.143	Amphiprion_percula
ENSMAMG00000001046	-	99	79.715	ENSATEG00000016358	slbp	99	79.715	Anabas_testudineus
ENSMAMG00000001046	-	74	49.524	ENSAPLG00000015989	-	91	52.381	Anas_platyrhynchos
ENSMAMG00000001046	-	90	46.388	ENSANAG00000034769	SLBP	84	51.869	Aotus_nancymaae
ENSMAMG00000001046	-	99	72.857	ENSACLG00000007036	-	99	72.857	Astatotilapia_calliptera
ENSMAMG00000001046	-	98	56.228	ENSAMXG00000014527	slbp	99	55.714	Astyanax_mexicanus
ENSMAMG00000001046	-	96	47.059	ENSBTAG00000001328	SLBP	89	46.909	Bos_taurus
ENSMAMG00000001046	-	88	48.193	ENSCJAG00000001790	SLBP	85	45.865	Callithrix_jacchus
ENSMAMG00000001046	-	90	46.545	ENSCAFG00000015016	SLBP	85	48.462	Canis_familiaris
ENSMAMG00000001046	-	90	46.545	ENSCAFG00020012334	SLBP	85	48.462	Canis_lupus_dingo
ENSMAMG00000001046	-	93	47.348	ENSCHIG00000019364	SLBP	88	47.191	Capra_hircus
ENSMAMG00000001046	-	78	50.000	ENSTSYG00000000376	SLBP	84	51.402	Carlito_syrichta
ENSMAMG00000001046	-	72	49.123	ENSCPOG00000000031	SLBP	81	49.012	Cavia_porcellus
ENSMAMG00000001046	-	87	48.077	ENSCATG00000029173	SLBP	84	51.402	Cercocebus_atys
ENSMAMG00000001046	-	60	59.649	ENSCLAG00000008157	SLBP	83	48.221	Chinchilla_lanigera
ENSMAMG00000001046	-	64	45.856	ENSCSAG00000015628	SLBP	61	45.652	Chlorocebus_sabaeus
ENSMAMG00000001046	-	90	50.593	ENSCPBG00000000746	SLBP	85	50.593	Chrysemys_picta_bellii
ENSMAMG00000001046	-	70	51.643	ENSCANG00000041008	SLBP	91	50.472	Colobus_angolensis_palliatus
ENSMAMG00000001046	-	90	47.656	ENSCGRG00001009760	-	85	47.490	Cricetulus_griseus_chok1gshd
ENSMAMG00000001046	-	93	46.183	ENSCGRG00001012991	-	89	46.038	Cricetulus_griseus_chok1gshd
ENSMAMG00000001046	-	90	47.656	ENSCGRG00000004506	Slbp	85	47.490	Cricetulus_griseus_crigri
ENSMAMG00000001046	-	98	69.065	ENSCSEG00000020337	-	99	69.065	Cynoglossus_semilaevis
ENSMAMG00000001046	-	90	69.020	ENSCVAG00000019592	-	92	69.020	Cyprinodon_variegatus
ENSMAMG00000001046	-	90	53.585	ENSDARG00000100558	slbp	82	54.340	Danio_rerio
ENSMAMG00000001046	-	75	54.930	ENSDNOG00000047539	SLBP	84	49.407	Dasypus_novemcinctus
ENSMAMG00000001046	-	58	56.098	ENSDORG00000003028	Slbp	91	62.338	Dipodomys_ordii
ENSMAMG00000001046	-	70	53.266	ENSETEG00000004641	SLBP	87	53.394	Echinops_telfairi
ENSMAMG00000001046	-	50	61.268	ENSEASG00005022714	SLBP	88	50.276	Equus_asinus_asinus
ENSMAMG00000001046	-	69	56.853	ENSECAG00000011689	SLBP	59	56.500	Equus_caballus
ENSMAMG00000001046	-	91	58.238	ENSELUG00000012854	slbp	92	58.238	Esox_lucius
ENSMAMG00000001046	-	59	60.479	ENSFCAG00000000169	SLBP	84	51.402	Felis_catus
ENSMAMG00000001046	-	89	49.206	ENSFALG00000010003	-	85	49.206	Ficedula_albicollis
ENSMAMG00000001046	-	64	56.522	ENSFDAG00000007592	SLBP	89	49.020	Fukomys_damarensis
ENSMAMG00000001046	-	90	67.704	ENSFHEG00000007497	slbp	92	66.148	Fundulus_heteroclitus
ENSMAMG00000001046	-	55	70.064	ENSGMOG00000015352	slbp	100	69.375	Gadus_morhua
ENSMAMG00000001046	-	89	50.794	ENSGALG00000015712	SLBP	85	50.794	Gallus_gallus
ENSMAMG00000001046	-	97	67.754	ENSGAFG00000019577	slbp	98	67.754	Gambusia_affinis
ENSMAMG00000001046	-	92	69.767	ENSGACG00000019596	slbp	94	69.767	Gasterosteus_aculeatus
ENSMAMG00000001046	-	82	53.247	ENSGAGG00000012096	SLBP	90	53.247	Gopherus_agassizii
ENSMAMG00000001046	-	87	48.077	ENSGGOG00000003167	SLBP	84	51.402	Gorilla_gorilla
ENSMAMG00000001046	-	99	73.214	ENSHBUG00000003338	-	99	73.214	Haplochromis_burtoni
ENSMAMG00000001046	-	62	51.685	ENSHGLG00000010461	-	78	47.196	Heterocephalus_glaber_female
ENSMAMG00000001046	-	54	52.532	ENSHGLG00000008313	-	83	41.200	Heterocephalus_glaber_female
ENSMAMG00000001046	-	54	53.797	ENSHGLG00100010510	-	83	42.000	Heterocephalus_glaber_male
ENSMAMG00000001046	-	58	53.571	ENSHGLG00100014906	-	78	47.196	Heterocephalus_glaber_male
ENSMAMG00000001046	-	59	58.480	ENSHGLG00100014018	-	91	55.721	Heterocephalus_glaber_male
ENSMAMG00000001046	-	98	68.929	ENSHCOG00000013425	slbp	99	68.929	Hippocampus_comes
ENSMAMG00000001046	-	76	59.259	ENSIPUG00000016780	slbp	88	55.738	Ictalurus_punctatus
ENSMAMG00000001046	-	63	57.865	ENSSTOG00000003262	SLBP	85	47.308	Ictidomys_tridecemlineatus
ENSMAMG00000001046	-	93	46.786	ENSJJAG00000002394	-	86	47.940	Jaculus_jaculus
ENSMAMG00000001046	-	90	48.828	ENSJJAG00000020549	-	82	49.603	Jaculus_jaculus
ENSMAMG00000001046	-	90	70.930	ENSKMAG00000008187	slbp	91	70.930	Kryptolebias_marmoratus
ENSMAMG00000001046	-	99	72.242	ENSLBEG00000024709	slbp	99	72.242	Labrus_bergylta
ENSMAMG00000001046	-	90	47.619	ENSLACG00000014623	SLBP	87	47.619	Latimeria_chalumnae
ENSMAMG00000001046	-	92	58.113	ENSLOCG00000011027	slbp	87	58.113	Lepisosteus_oculatus
ENSMAMG00000001046	-	74	56.459	ENSLAFG00000012933	SLBP	85	55.708	Loxodonta_africana
ENSMAMG00000001046	-	86	48.062	ENSMFAG00000030130	SLBP	82	46.182	Macaca_fascicularis
ENSMAMG00000001046	-	87	46.816	ENSMMUG00000032303	SLBP	88	50.698	Macaca_mulatta
ENSMAMG00000001046	-	54	47.500	ENSMNEG00000008082	SLBP	64	47.239	Macaca_nemestrina
ENSMAMG00000001046	-	81	47.479	ENSMLEG00000024639	SLBP	88	47.303	Mandrillus_leucophaeus
ENSMAMG00000001046	-	99	73.214	ENSMZEG00005017261	-	99	73.214	Maylandia_zebra
ENSMAMG00000001046	-	74	53.140	ENSMGAG00000013085	SLBP	91	53.140	Meleagris_gallopavo
ENSMAMG00000001046	-	93	46.591	ENSMAUG00000009490	Slbp	88	46.442	Mesocricetus_auratus
ENSMAMG00000001046	-	75	50.667	ENSMICG00000014244	SLBP	90	51.835	Microcebus_murinus
ENSMAMG00000001046	-	90	47.656	ENSMOCG00000015826	Slbp	86	54.726	Microtus_ochrogaster
ENSMAMG00000001046	-	90	66.008	ENSMMOG00000010181	slbp	92	66.008	Mola_mola
ENSMAMG00000001046	-	88	48.302	ENSMODG00000004304	SLBP	89	49.213	Monodelphis_domestica
ENSMAMG00000001046	-	99	78.929	ENSMALG00000013883	-	73	78.929	Monopterus_albus
ENSMAMG00000001046	-	90	48.047	MGP_CAROLIEiJ_G0027117	Slbp	83	54.726	Mus_caroli
ENSMAMG00000001046	-	90	47.656	ENSMUSG00000004642	Slbp	84	54.726	Mus_musculus
ENSMAMG00000001046	-	90	47.656	MGP_PahariEiJ_G0016901	Slbp	83	54.726	Mus_pahari
ENSMAMG00000001046	-	90	47.656	MGP_SPRETEiJ_G0028113	Slbp	84	54.726	Mus_spretus
ENSMAMG00000001046	-	61	48.889	ENSMPUG00000011139	SLBP	84	51.977	Mustela_putorius_furo
ENSMAMG00000001046	-	71	49.321	ENSMLUG00000004425	SLBP	82	52.913	Myotis_lucifugus
ENSMAMG00000001046	-	90	47.656	ENSNGAG00000020799	Slbp	85	47.490	Nannospalax_galili
ENSMAMG00000001046	-	83	75.847	ENSNBRG00000006044	-	90	75.847	Neolamprologus_brichardi
ENSMAMG00000001046	-	87	46.816	ENSNLEG00000000048	SLBP	84	51.402	Nomascus_leucogenys
ENSMAMG00000001046	-	57	62.346	ENSMEUG00000002501	SLBP	100	55.789	Notamacropus_eugenii
ENSMAMG00000001046	-	77	51.142	ENSODEG00000012641	SLBP	87	48.638	Octodon_degus
ENSMAMG00000001046	-	99	73.214	ENSONIG00000017469	-	99	73.214	Oreochromis_niloticus
ENSMAMG00000001046	-	74	53.365	ENSOANG00000014243	SLBP	86	53.365	Ornithorhynchus_anatinus
ENSMAMG00000001046	-	98	60.507	ENSORLG00000024887	-	98	60.507	Oryzias_latipes
ENSMAMG00000001046	-	93	61.303	ENSORLG00020007798	slbp	92	61.303	Oryzias_latipes_hni
ENSMAMG00000001046	-	98	60.507	ENSORLG00015016656	slbp	98	60.507	Oryzias_latipes_hsok
ENSMAMG00000001046	-	89	62.550	ENSOMEG00000010818	slbp	98	61.232	Oryzias_melastigma
ENSMAMG00000001046	-	74	51.818	ENSOGAG00000009750	SLBP	90	48.276	Otolemur_garnettii
ENSMAMG00000001046	-	74	52.381	ENSOARG00000016090	SLBP	91	52.113	Ovis_aries
ENSMAMG00000001046	-	87	48.077	ENSPPAG00000033300	SLBP	84	51.402	Pan_paniscus
ENSMAMG00000001046	-	59	59.763	ENSPPRG00000016897	SLBP	92	45.693	Panthera_pardus
ENSMAMG00000001046	-	87	48.077	ENSPTRG00000015832	SLBP	84	51.402	Pan_troglodytes
ENSMAMG00000001046	-	80	47.177	ENSPANG00000004932	SLBP	84	51.402	Papio_anubis
ENSMAMG00000001046	-	90	59.690	ENSPKIG00000006183	slbp	89	58.935	Paramormyrops_kingsleyae
ENSMAMG00000001046	-	86	59.836	ENSPMGG00000017684	-	99	64.151	Periophthalmus_magnuspinnatus
ENSMAMG00000001046	-	90	47.656	ENSPEMG00000018369	Slbp	85	47.490	Peromyscus_maniculatus_bairdii
ENSMAMG00000001046	-	77	55.405	ENSPCIG00000013575	SLBP	70	50.973	Phascolarctos_cinereus
ENSMAMG00000001046	-	97	68.478	ENSPFOG00000000462	slbp	98	68.478	Poecilia_formosa
ENSMAMG00000001046	-	97	68.841	ENSPLAG00000008300	slbp	98	68.841	Poecilia_latipinna
ENSMAMG00000001046	-	97	68.478	ENSPMEG00000020807	slbp	98	68.478	Poecilia_mexicana
ENSMAMG00000001046	-	97	68.841	ENSPREG00000004561	slbp	98	68.841	Poecilia_reticulata
ENSMAMG00000001046	-	87	48.077	ENSPPYG00000014529	SLBP	90	47.909	Pongo_abelii
ENSMAMG00000001046	-	75	50.667	ENSPCOG00000017399	SLBP	90	51.835	Propithecus_coquereli
ENSMAMG00000001046	-	88	47.451	ENSPVAG00000002807	SLBP	92	47.876	Pteropus_vampyrus
ENSMAMG00000001046	-	99	73.214	ENSPNYG00000005451	-	99	73.214	Pundamilia_nyererei
ENSMAMG00000001046	-	93	55.515	ENSPNAG00000018503	slbp	95	55.515	Pygocentrus_nattereri
ENSMAMG00000001046	-	90	47.656	ENSRNOG00000037162	Slbp	85	47.490	Rattus_norvegicus
ENSMAMG00000001046	-	87	48.077	ENSRBIG00000039159	SLBP	84	51.402	Rhinopithecus_bieti
ENSMAMG00000001046	-	90	47.212	ENSRROG00000030081	SLBP	92	47.909	Rhinopithecus_roxellana
ENSMAMG00000001046	-	64	51.648	ENSSBOG00000033897	SLBP	89	50.811	Saimiri_boliviensis_boliviensis
ENSMAMG00000001046	-	83	53.527	ENSSHAG00000013939	SLBP	85	49.281	Sarcophilus_harrisii
ENSMAMG00000001046	-	90	59.690	ENSSFOG00015019429	slbp	89	59.690	Scleropages_formosus
ENSMAMG00000001046	-	99	76.429	ENSSMAG00000016028	-	99	76.429	Scophthalmus_maximus
ENSMAMG00000001046	-	97	79.273	ENSSDUG00000000855	-	98	79.273	Seriola_dumerili
ENSMAMG00000001046	-	53	82.432	ENSSLDG00000022893	-	85	82.432	Seriola_lalandi_dorsalis
ENSMAMG00000001046	-	91	57.692	ENSSLDG00000007554	-	83	57.308	Seriola_lalandi_dorsalis
ENSMAMG00000001046	-	89	46.185	ENSSPUG00000016007	SLBP	87	49.407	Sphenodon_punctatus
ENSMAMG00000001046	-	99	75.801	ENSSPAG00000004021	slbp	99	75.801	Stegastes_partitus
ENSMAMG00000001046	-	88	49.200	ENSSSCG00000008676	SLBP	81	49.600	Sus_scrofa
ENSMAMG00000001046	-	89	48.810	ENSTGUG00000010626	-	90	49.603	Taeniopygia_guttata
ENSMAMG00000001046	-	98	66.429	ENSTRUG00000000688	slbp	99	66.429	Takifugu_rubripes
ENSMAMG00000001046	-	90	63.281	ENSTNIG00000000484	-	98	63.281	Tetraodon_nigroviridis
ENSMAMG00000001046	-	54	46.479	ENSTBEG00000004085	SLBP	58	44.118	Tupaia_belangeri
ENSMAMG00000001046	-	53	58.940	ENSTTRG00000004010	-	100	50.000	Tursiops_truncatus
ENSMAMG00000001046	-	70	50.917	ENSTTRG00000010901	-	88	52.683	Tursiops_truncatus
ENSMAMG00000001046	-	73	52.582	ENSUAMG00000012990	SLBP	81	48.800	Ursus_americanus
ENSMAMG00000001046	-	80	52.632	ENSVVUG00000015578	-	85	48.846	Vulpes_vulpes
ENSMAMG00000001046	-	91	48.855	ENSXETG00000003876	slbp	90	48.450	Xenopus_tropicalis
ENSMAMG00000001046	-	89	68.651	ENSXCOG00000008275	slbp	94	68.651	Xiphophorus_couchianus
ENSMAMG00000001046	-	97	67.391	ENSXMAG00000001331	-	97	67.391	Xiphophorus_maculatus