EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000001247 (Gene tree)
Gene ID: 113126324
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 5967 bases
Position: chrOOHQ01000103.1:2794825-2800791
Accession: 113126324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000001805	RRM_1	PF00076.22	6.9e-27	1	2
ENSMAMP00000001805	RRM_1	PF00076.22	6.9e-27	2	2
ENSMAMP00000001780	RRM_1	PF00076.22	1e-26	1	2
ENSMAMP00000001780	RRM_1	PF00076.22	1e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000001815	-	3617	-	ENSMAMP00000001780	311 (aa)	XP_026156075	UPI000E4552D0
ENSMAMT00000001840	-	828	-	ENSMAMP00000001805	275 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000001247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000001247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000001247	trnau1apa	94	42.687	ENSMAMG00000012192	trnau1apb	95	43.243
ENSMAMG00000001247	trnau1apa	62	32.386	ENSMAMG00000020566	-	60	32.386
ENSMAMG00000001247	trnau1apa	71	31.056	ENSMAMG00000014610	pabpc1b	58	31.447
ENSMAMG00000001247	trnau1apa	62	31.250	ENSMAMG00000003680	tia1l	60	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000001247	trnau1apa	98	58.824	ENSG00000180098	TRNAU1AP	98	58.958	Homo_sapiens
ENSMAMG00000001247	trnau1apa	100	87.821	ENSAPOG00000007148	TRNAU1AP	99	88.141	Acanthochromis_polyacanthus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSAMEG00000011367	TRNAU1AP	98	58.958	Ailuropoda_melanoleuca
ENSMAMG00000001247	trnau1apa	93	93.617	ENSACIG00000004161	trnau1apa	93	93.617	Amphilophus_citrinellus
ENSMAMG00000001247	trnau1apa	100	88.462	ENSAOCG00000008056	trnau1apa	99	88.462	Amphiprion_ocellaris
ENSMAMG00000001247	trnau1apa	100	88.462	ENSAPEG00000008868	trnau1apa	99	88.462	Amphiprion_percula
ENSMAMG00000001247	trnau1apa	100	91.139	ENSATEG00000012140	trnau1apa	99	91.139	Anabas_testudineus
ENSMAMG00000001247	trnau1apa	91	60.148	ENSAPLG00000002606	TRNAU1AP	99	59.928	Anas_platyrhynchos
ENSMAMG00000001247	trnau1apa	92	49.635	ENSACAG00000003995	-	95	49.832	Anolis_carolinensis
ENSMAMG00000001247	trnau1apa	72	40.930	ENSACAG00000004205	-	86	39.738	Anolis_carolinensis
ENSMAMG00000001247	trnau1apa	98	58.824	ENSANAG00000018976	TRNAU1AP	98	58.958	Aotus_nancymaae
ENSMAMG00000001247	trnau1apa	100	84.295	ENSACLG00000018515	trnau1apa	99	84.615	Astatotilapia_calliptera
ENSMAMG00000001247	trnau1apa	94	71.591	ENSAMXG00000029240	-	97	71.591	Astyanax_mexicanus
ENSMAMG00000001247	trnau1apa	100	52.812	ENSAMXG00000013750	trnau1apa	97	52.824	Astyanax_mexicanus
ENSMAMG00000001247	trnau1apa	98	58.478	ENSBTAG00000010393	TRNAU1AP	98	58.632	Bos_taurus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSCJAG00000009717	TRNAU1AP	98	58.958	Callithrix_jacchus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSCAFG00000011735	TRNAU1AP	98	58.958	Canis_familiaris
ENSMAMG00000001247	trnau1apa	98	58.824	ENSCAFG00020023584	TRNAU1AP	98	58.958	Canis_lupus_dingo
ENSMAMG00000001247	trnau1apa	99	58.219	ENSCHIG00000023215	TRNAU1AP	99	58.387	Capra_hircus
ENSMAMG00000001247	trnau1apa	98	59.790	ENSTSYG00000003506	TRNAU1AP	89	70.588	Carlito_syrichta
ENSMAMG00000001247	trnau1apa	98	58.824	ENSCPOG00000001925	TRNAU1AP	98	58.958	Cavia_porcellus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSCCAG00000037506	TRNAU1AP	98	58.958	Cebus_capucinus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSCATG00000044617	TRNAU1AP	98	58.958	Cercocebus_atys
ENSMAMG00000001247	trnau1apa	98	58.824	ENSCLAG00000008223	TRNAU1AP	89	70.588	Chinchilla_lanigera
ENSMAMG00000001247	trnau1apa	98	58.824	ENSCSAG00000001014	TRNAU1AP	98	58.958	Chlorocebus_sabaeus
ENSMAMG00000001247	trnau1apa	94	58.484	ENSCPBG00000000121	TRNAU1AP	99	58.099	Chrysemys_picta_bellii
ENSMAMG00000001247	trnau1apa	61	47.929	ENSCSAVG00000011781	-	89	47.929	Ciona_savignyi
ENSMAMG00000001247	trnau1apa	98	50.519	ENSCANG00000041949	TRNAU1AP	98	53.266	Colobus_angolensis_palliatus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSCGRG00001004713	Trnau1ap	98	58.958	Cricetulus_griseus_chok1gshd
ENSMAMG00000001247	trnau1apa	98	58.824	ENSCGRG00000014532	Trnau1ap	98	58.958	Cricetulus_griseus_crigri
ENSMAMG00000001247	trnau1apa	99	91.791	ENSCSEG00000006663	trnau1apa	90	90.441	Cynoglossus_semilaevis
ENSMAMG00000001247	trnau1apa	99	77.814	ENSCVAG00000018069	trnau1apa	99	80.707	Cyprinodon_variegatus
ENSMAMG00000001247	trnau1apa	99	51.325	ENSDARG00000101323	trnau1apa	95	50.331	Danio_rerio
ENSMAMG00000001247	trnau1apa	61	61.176	ENSDNOG00000047959	-	89	61.047	Dasypus_novemcinctus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSDNOG00000033009	TRNAU1AP	98	58.958	Dasypus_novemcinctus
ENSMAMG00000001247	trnau1apa	97	61.172	ENSDORG00000006349	Trnau1ap	97	62.500	Dipodomys_ordii
ENSMAMG00000001247	trnau1apa	94	35.474	FBgn0031607	CG15440	50	47.904	Drosophila_melanogaster
ENSMAMG00000001247	trnau1apa	82	58.130	ENSETEG00000012594	TRNAU1AP	98	57.540	Echinops_telfairi
ENSMAMG00000001247	trnau1apa	72	46.591	ENSEBUG00000006349	-	58	46.591	Eptatretus_burgeri
ENSMAMG00000001247	trnau1apa	98	58.824	ENSEASG00005010062	TRNAU1AP	90	68.493	Equus_asinus_asinus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSECAG00000012980	TRNAU1AP	90	68.493	Equus_caballus
ENSMAMG00000001247	trnau1apa	100	74.522	ENSELUG00000017686	trnau1apa	99	75.159	Esox_lucius
ENSMAMG00000001247	trnau1apa	93	80.682	ENSELUG00000022790	-	95	80.682	Esox_lucius
ENSMAMG00000001247	trnau1apa	98	58.824	ENSFCAG00000013401	TRNAU1AP	98	58.958	Felis_catus
ENSMAMG00000001247	trnau1apa	94	58.845	ENSFALG00000001371	TRNAU1AP	99	58.451	Ficedula_albicollis
ENSMAMG00000001247	trnau1apa	99	58.562	ENSFDAG00000018599	TRNAU1AP	99	58.710	Fukomys_damarensis
ENSMAMG00000001247	trnau1apa	79	86.400	ENSFHEG00000018232	trnau1apa	86	84.528	Fundulus_heteroclitus
ENSMAMG00000001247	trnau1apa	100	65.079	ENSGMOG00000016508	trnau1apa	99	64.968	Gadus_morhua
ENSMAMG00000001247	trnau1apa	70	39.732	ENSGALG00000012721	C2H6orf52	90	39.179	Gallus_gallus
ENSMAMG00000001247	trnau1apa	98	58.333	ENSGALG00000001310	-	98	57.966	Gallus_gallus
ENSMAMG00000001247	trnau1apa	80	83.600	ENSGAFG00000004928	trnau1apa	97	82.288	Gambusia_affinis
ENSMAMG00000001247	trnau1apa	100	88.103	ENSGACG00000001443	trnau1apa	99	89.068	Gasterosteus_aculeatus
ENSMAMG00000001247	trnau1apa	94	58.484	ENSGAGG00000004940	TRNAU1AP	99	58.099	Gopherus_agassizii
ENSMAMG00000001247	trnau1apa	98	58.824	ENSGGOG00000003511	TRNAU1AP	98	58.958	Gorilla_gorilla
ENSMAMG00000001247	trnau1apa	100	82.650	ENSHBUG00000002510	trnau1apa	99	82.965	Haplochromis_burtoni
ENSMAMG00000001247	trnau1apa	98	58.824	ENSHGLG00000010380	TRNAU1AP	89	70.588	Heterocephalus_glaber_female
ENSMAMG00000001247	trnau1apa	98	56.747	ENSHGLG00100012699	TRNAU1AP	98	57.003	Heterocephalus_glaber_male
ENSMAMG00000001247	trnau1apa	99	74.286	ENSHCOG00000014770	trnau1apa	99	73.016	Hippocampus_comes
ENSMAMG00000001247	trnau1apa	98	58.824	ENSSTOG00000000079	TRNAU1AP	98	58.958	Ictidomys_tridecemlineatus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSJJAG00000010128	Trnau1ap	98	58.958	Jaculus_jaculus
ENSMAMG00000001247	trnau1apa	99	83.280	ENSKMAG00000001230	trnau1apa	99	84.566	Kryptolebias_marmoratus
ENSMAMG00000001247	trnau1apa	99	82.704	ENSLBEG00000011683	trnau1apa	99	82.390	Labrus_bergylta
ENSMAMG00000001247	trnau1apa	99	51.877	ENSLACG00000005541	TRNAU1AP	99	51.923	Latimeria_chalumnae
ENSMAMG00000001247	trnau1apa	99	61.017	ENSLOCG00000004041	trnau1apa	99	59.677	Lepisosteus_oculatus
ENSMAMG00000001247	trnau1apa	98	59.170	ENSLAFG00000007628	TRNAU1AP	98	59.283	Loxodonta_africana
ENSMAMG00000001247	trnau1apa	98	71.111	ENSMFAG00000043751	TRNAU1AP	98	58.958	Macaca_fascicularis
ENSMAMG00000001247	trnau1apa	98	58.824	ENSMMUG00000006561	TRNAU1AP	98	58.958	Macaca_mulatta
ENSMAMG00000001247	trnau1apa	98	71.111	ENSMNEG00000044201	TRNAU1AP	98	58.958	Macaca_nemestrina
ENSMAMG00000001247	trnau1apa	98	71.111	ENSMLEG00000015649	TRNAU1AP	98	58.966	Mandrillus_leucophaeus
ENSMAMG00000001247	trnau1apa	100	84.295	ENSMZEG00005017722	trnau1apa	99	84.615	Maylandia_zebra
ENSMAMG00000001247	trnau1apa	97	56.106	ENSMGAG00000002105	TRNAU1AP	99	58.333	Meleagris_gallopavo
ENSMAMG00000001247	trnau1apa	98	58.824	ENSMICG00000008386	TRNAU1AP	98	58.958	Microcebus_murinus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSMOCG00000011189	Trnau1ap	98	58.958	Microtus_ochrogaster
ENSMAMG00000001247	trnau1apa	100	76.471	ENSMMOG00000012107	trnau1apa	99	76.632	Mola_mola
ENSMAMG00000001247	trnau1apa	98	58.478	ENSMODG00000010927	TRNAU1AP	98	58.333	Monodelphis_domestica
ENSMAMG00000001247	trnau1apa	100	93.248	ENSMALG00000016778	trnau1apa	99	90.997	Monopterus_albus
ENSMAMG00000001247	trnau1apa	98	58.824	MGP_CAROLIEiJ_G0026563	Trnau1ap	89	70.588	Mus_caroli
ENSMAMG00000001247	trnau1apa	98	58.824	ENSMUSG00000028898	Trnau1ap	89	70.588	Mus_musculus
ENSMAMG00000001247	trnau1apa	98	58.824	MGP_PahariEiJ_G0028896	Trnau1ap	84	76.271	Mus_pahari
ENSMAMG00000001247	trnau1apa	98	58.824	MGP_SPRETEiJ_G0027544	Trnau1ap	89	70.588	Mus_spretus
ENSMAMG00000001247	trnau1apa	99	58.904	ENSMPUG00000015511	TRNAU1AP	99	59.032	Mustela_putorius_furo
ENSMAMG00000001247	trnau1apa	98	58.824	ENSMLUG00000012586	TRNAU1AP	98	58.958	Myotis_lucifugus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSNGAG00000015881	Trnau1ap	89	70.588	Nannospalax_galili
ENSMAMG00000001247	trnau1apa	100	72.063	ENSNBRG00000001758	trnau1apa	99	73.154	Neolamprologus_brichardi
ENSMAMG00000001247	trnau1apa	98	71.111	ENSNLEG00000009822	TRNAU1AP	98	58.966	Nomascus_leucogenys
ENSMAMG00000001247	trnau1apa	95	58.363	ENSMEUG00000006117	TRNAU1AP	99	58.333	Notamacropus_eugenii
ENSMAMG00000001247	trnau1apa	57	63.218	ENSOPRG00000007084	-	59	63.218	Ochotona_princeps
ENSMAMG00000001247	trnau1apa	98	58.824	ENSODEG00000002970	TRNAU1AP	98	58.958	Octodon_degus
ENSMAMG00000001247	trnau1apa	81	86.111	ENSONIG00000004715	trnau1apa	97	86.508	Oreochromis_niloticus
ENSMAMG00000001247	trnau1apa	99	45.172	ENSOANG00000005325	-	99	45.833	Ornithorhynchus_anatinus
ENSMAMG00000001247	trnau1apa	86	48.519	ENSOCUG00000006834	-	97	46.816	Oryctolagus_cuniculus
ENSMAMG00000001247	trnau1apa	98	57.439	ENSOCUG00000011704	-	98	57.655	Oryctolagus_cuniculus
ENSMAMG00000001247	trnau1apa	98	51.049	ENSOCUG00000002353	-	98	50.345	Oryctolagus_cuniculus
ENSMAMG00000001247	trnau1apa	99	80.000	ENSORLG00000010428	trnau1apa	99	80.000	Oryzias_latipes
ENSMAMG00000001247	trnau1apa	100	78.205	ENSORLG00020000926	trnau1ap	99	78.846	Oryzias_latipes_hni
ENSMAMG00000001247	trnau1apa	100	78.205	ENSORLG00015009858	trnau1ap	99	78.846	Oryzias_latipes_hsok
ENSMAMG00000001247	trnau1apa	100	77.244	ENSOMEG00000007873	trnau1apa	99	77.885	Oryzias_melastigma
ENSMAMG00000001247	trnau1apa	98	58.824	ENSOGAG00000002274	TRNAU1AP	98	58.958	Otolemur_garnettii
ENSMAMG00000001247	trnau1apa	99	58.219	ENSOARG00000002843	TRNAU1AP	99	58.387	Ovis_aries
ENSMAMG00000001247	trnau1apa	98	58.824	ENSPPAG00000033927	TRNAU1AP	90	70.588	Pan_paniscus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSPPRG00000004416	TRNAU1AP	98	58.958	Panthera_pardus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSPTIG00000016677	TRNAU1AP	98	58.958	Panthera_tigris_altaica
ENSMAMG00000001247	trnau1apa	89	54.724	ENSPTRG00000000434	-	94	54.962	Pan_troglodytes
ENSMAMG00000001247	trnau1apa	98	58.824	ENSPANG00000016019	TRNAU1AP	98	58.958	Papio_anubis
ENSMAMG00000001247	trnau1apa	94	60.678	ENSPKIG00000015511	trnau1apa	93	58.904	Paramormyrops_kingsleyae
ENSMAMG00000001247	trnau1apa	92	80.682	ENSPKIG00000022205	-	94	80.682	Paramormyrops_kingsleyae
ENSMAMG00000001247	trnau1apa	94	58.273	ENSPSIG00000006864	TRNAU1AP	99	58.099	Pelodiscus_sinensis
ENSMAMG00000001247	trnau1apa	99	72.792	ENSPMGG00000023893	trnau1apa	98	71.378	Periophthalmus_magnuspinnatus
ENSMAMG00000001247	trnau1apa	98	58.478	ENSPEMG00000007877	Trnau1ap	98	58.632	Peromyscus_maniculatus_bairdii
ENSMAMG00000001247	trnau1apa	61	53.757	ENSPMAG00000000592	trnau1apa	95	53.757	Petromyzon_marinus
ENSMAMG00000001247	trnau1apa	77	52.995	ENSPMAG00000005934	trnau1apa	96	52.093	Petromyzon_marinus
ENSMAMG00000001247	trnau1apa	99	79.100	ENSPFOG00000008100	trnau1apa	99	81.350	Poecilia_formosa
ENSMAMG00000001247	trnau1apa	96	78.595	ENSPLAG00000010236	trnau1apa	99	80.936	Poecilia_latipinna
ENSMAMG00000001247	trnau1apa	99	77.097	ENSPMEG00000016387	trnau1apa	97	79.355	Poecilia_mexicana
ENSMAMG00000001247	trnau1apa	89	82.105	ENSPREG00000019821	trnau1apa	98	82.105	Poecilia_reticulata
ENSMAMG00000001247	trnau1apa	89	49.643	ENSPPYG00000001639	-	99	51.071	Pongo_abelii
ENSMAMG00000001247	trnau1apa	98	58.824	ENSPCOG00000027712	-	98	58.958	Propithecus_coquereli
ENSMAMG00000001247	trnau1apa	96	48.754	ENSPCOG00000023470	-	99	49.822	Propithecus_coquereli
ENSMAMG00000001247	trnau1apa	98	58.824	ENSPVAG00000017214	TRNAU1AP	98	58.958	Pteropus_vampyrus
ENSMAMG00000001247	trnau1apa	100	85.185	ENSPNYG00000010130	trnau1apa	99	85.185	Pundamilia_nyererei
ENSMAMG00000001247	trnau1apa	99	56.679	ENSPNAG00000024905	trnau1apa	97	55.235	Pygocentrus_nattereri
ENSMAMG00000001247	trnau1apa	96	52.980	ENSRNOG00000055344	Trnau1ap	92	55.556	Rattus_norvegicus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSRBIG00000029083	TRNAU1AP	98	58.958	Rhinopithecus_bieti
ENSMAMG00000001247	trnau1apa	98	58.824	ENSRROG00000029128	TRNAU1AP	98	58.958	Rhinopithecus_roxellana
ENSMAMG00000001247	trnau1apa	98	58.824	ENSSBOG00000021299	TRNAU1AP	98	58.958	Saimiri_boliviensis_boliviensis
ENSMAMG00000001247	trnau1apa	98	58.478	ENSSHAG00000008108	TRNAU1AP	98	58.333	Sarcophilus_harrisii
ENSMAMG00000001247	trnau1apa	100	86.218	ENSSMAG00000020851	trnau1apa	99	88.462	Scophthalmus_maximus
ENSMAMG00000001247	trnau1apa	100	90.446	ENSSDUG00000011734	trnau1apa	99	90.127	Seriola_dumerili
ENSMAMG00000001247	trnau1apa	100	75.352	ENSSLDG00000012101	trnau1apa	99	76.408	Seriola_lalandi_dorsalis
ENSMAMG00000001247	trnau1apa	95	58.865	ENSSARG00000007536	TRNAU1AP	99	59.000	Sorex_araneus
ENSMAMG00000001247	trnau1apa	64	51.256	ENSSPUG00000010415	-	99	49.749	Sphenodon_punctatus
ENSMAMG00000001247	trnau1apa	98	56.055	ENSSPUG00000010400	-	99	56.026	Sphenodon_punctatus
ENSMAMG00000001247	trnau1apa	100	89.423	ENSSPAG00000005029	trnau1apa	99	89.423	Stegastes_partitus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSSSCG00000030284	TRNAU1AP	98	58.958	Sus_scrofa
ENSMAMG00000001247	trnau1apa	70	41.014	ENSTGUG00000005908	-	99	41.063	Taeniopygia_guttata
ENSMAMG00000001247	trnau1apa	95	59.075	ENSTGUG00000000735	-	100	57.516	Taeniopygia_guttata
ENSMAMG00000001247	trnau1apa	100	82.637	ENSTRUG00000003352	trnau1apa	99	82.315	Takifugu_rubripes
ENSMAMG00000001247	trnau1apa	100	79.100	ENSTNIG00000006129	trnau1apa	99	79.100	Tetraodon_nigroviridis
ENSMAMG00000001247	trnau1apa	85	51.515	ENSTBEG00000008049	-	98	53.030	Tupaia_belangeri
ENSMAMG00000001247	trnau1apa	98	58.824	ENSTTRG00000001854	TRNAU1AP	98	58.958	Tursiops_truncatus
ENSMAMG00000001247	trnau1apa	94	58.633	ENSUAMG00000008789	TRNAU1AP	99	58.784	Ursus_americanus
ENSMAMG00000001247	trnau1apa	98	58.824	ENSUMAG00000011068	TRNAU1AP	98	58.958	Ursus_maritimus
ENSMAMG00000001247	trnau1apa	99	50.470	ENSVPAG00000006778	TRNAU1AP	99	51.724	Vicugna_pacos
ENSMAMG00000001247	trnau1apa	97	58.188	ENSVVUG00000012518	TRNAU1AP	91	58.361	Vulpes_vulpes
ENSMAMG00000001247	trnau1apa	99	78.457	ENSXMAG00000017361	trnau1apa	99	81.672	Xiphophorus_maculatus