EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000001260 (Gene tree)
Gene ID: 113127946
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 6879 bases
Position: chrOOHQ01000044.1:11134067-11140945
Accession: 113127946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000001765	RNA_pol_I_A49	PF06870.12	5.9e-114	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000001801	-	5006	-	ENSMAMP00000001765	420 (aa)	XP_026158678	UPI000E459D0C

Gene Model

Click here to download ENSMAMG00000001260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000001260's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000001260	polr1e	99	43.026	ENSG00000137054	POLR1E	99	43.026	Homo_sapiens
ENSMAMG00000001260	polr1e	99	69.639	ENSAPOG00000012452	polr1e	99	69.639	Acanthochromis_polyacanthus
ENSMAMG00000001260	polr1e	99	39.615	ENSAMEG00000010193	POLR1E	97	39.615	Ailuropoda_melanoleuca
ENSMAMG00000001260	polr1e	99	65.707	ENSACIG00000009884	polr1e	99	70.918	Amphilophus_citrinellus
ENSMAMG00000001260	polr1e	99	76.145	ENSAOCG00000005665	polr1e	99	76.145	Amphiprion_ocellaris
ENSMAMG00000001260	polr1e	99	76.627	ENSAPEG00000020581	polr1e	99	76.627	Amphiprion_percula
ENSMAMG00000001260	polr1e	99	79.759	ENSATEG00000020609	polr1e	99	79.759	Anabas_testudineus
ENSMAMG00000001260	polr1e	80	38.802	ENSAPLG00000010340	POLR1E	99	38.802	Anas_platyrhynchos
ENSMAMG00000001260	polr1e	99	43.468	ENSANAG00000038046	POLR1E	99	43.468	Aotus_nancymaae
ENSMAMG00000001260	polr1e	99	76.134	ENSACLG00000013685	polr1e	99	76.134	Astatotilapia_calliptera
ENSMAMG00000001260	polr1e	99	57.692	ENSAMXG00000018181	polr1e	100	57.692	Astyanax_mexicanus
ENSMAMG00000001260	polr1e	99	45.368	ENSBTAG00000012243	POLR1E	99	45.368	Bos_taurus
ENSMAMG00000001260	polr1e	94	42.500	ENSCJAG00000010512	POLR1E	94	45.646	Callithrix_jacchus
ENSMAMG00000001260	polr1e	99	43.468	ENSCAFG00000002377	POLR1E	99	43.468	Canis_familiaris
ENSMAMG00000001260	polr1e	99	43.230	ENSCAFG00020017851	POLR1E	99	43.230	Canis_lupus_dingo
ENSMAMG00000001260	polr1e	97	46.814	ENSCHIG00000019479	POLR1E	97	46.814	Capra_hircus
ENSMAMG00000001260	polr1e	99	43.468	ENSTSYG00000002075	POLR1E	99	43.468	Carlito_syrichta
ENSMAMG00000001260	polr1e	69	42.414	ENSCAPG00000015653	POLR1E	99	42.414	Cavia_aperea
ENSMAMG00000001260	polr1e	99	44.656	ENSCPOG00000009965	POLR1E	100	44.656	Cavia_porcellus
ENSMAMG00000001260	polr1e	99	39.524	ENSCCAG00000029460	POLR1E	99	39.524	Cebus_capucinus
ENSMAMG00000001260	polr1e	99	42.755	ENSCATG00000031732	POLR1E	99	49.558	Cercocebus_atys
ENSMAMG00000001260	polr1e	87	46.448	ENSCLAG00000012701	POLR1E	96	46.448	Chinchilla_lanigera
ENSMAMG00000001260	polr1e	99	42.755	ENSCSAG00000010782	POLR1E	99	42.755	Chlorocebus_sabaeus
ENSMAMG00000001260	polr1e	94	37.374	ENSCHOG00000013024	POLR1E	82	37.374	Choloepus_hoffmanni
ENSMAMG00000001260	polr1e	99	44.286	ENSCPBG00000006923	POLR1E	100	44.286	Chrysemys_picta_bellii
ENSMAMG00000001260	polr1e	99	43.230	ENSCANG00000036112	POLR1E	99	49.573	Colobus_angolensis_palliatus
ENSMAMG00000001260	polr1e	99	41.706	ENSCGRG00001006197	Polr1e	96	41.706	Cricetulus_griseus_chok1gshd
ENSMAMG00000001260	polr1e	99	41.232	ENSCGRG00000006430	Polr1e	96	41.232	Cricetulus_griseus_crigri
ENSMAMG00000001260	polr1e	99	71.154	ENSCSEG00000005121	polr1e	100	71.154	Cynoglossus_semilaevis
ENSMAMG00000001260	polr1e	99	75.904	ENSCVAG00000019759	polr1e	99	75.904	Cyprinodon_variegatus
ENSMAMG00000001260	polr1e	96	58.168	ENSDARG00000006434	polr1e	99	58.795	Danio_rerio
ENSMAMG00000001260	polr1e	99	36.364	ENSDNOG00000010257	POLR1E	99	36.364	Dasypus_novemcinctus
ENSMAMG00000001260	polr1e	85	40.166	ENSETEG00000018204	POLR1E	99	40.443	Echinops_telfairi
ENSMAMG00000001260	polr1e	99	43.468	ENSEASG00005000675	POLR1E	99	43.468	Equus_asinus_asinus
ENSMAMG00000001260	polr1e	99	43.468	ENSECAG00000014669	POLR1E	99	43.468	Equus_caballus
ENSMAMG00000001260	polr1e	94	39.798	ENSEEUG00000011928	POLR1E	84	39.798	Erinaceus_europaeus
ENSMAMG00000001260	polr1e	99	67.303	ENSELUG00000008150	polr1e	99	67.303	Esox_lucius
ENSMAMG00000001260	polr1e	99	43.468	ENSFCAG00000013081	POLR1E	99	43.468	Felis_catus
ENSMAMG00000001260	polr1e	94	43.687	ENSFALG00000012950	POLR1E	99	43.687	Ficedula_albicollis
ENSMAMG00000001260	polr1e	99	46.556	ENSFDAG00000016917	POLR1E	100	46.556	Fukomys_damarensis
ENSMAMG00000001260	polr1e	99	73.012	ENSFHEG00000009801	polr1e	99	73.012	Fundulus_heteroclitus
ENSMAMG00000001260	polr1e	99	53.664	ENSGMOG00000003336	POLR1E	100	53.664	Gadus_morhua
ENSMAMG00000001260	polr1e	97	45.499	ENSGALG00000005395	POLR1E	98	45.499	Gallus_gallus
ENSMAMG00000001260	polr1e	99	74.458	ENSGAFG00000004850	polr1e	99	74.458	Gambusia_affinis
ENSMAMG00000001260	polr1e	99	70.574	ENSGACG00000016087	polr1e	99	70.574	Gasterosteus_aculeatus
ENSMAMG00000001260	polr1e	95	41.045	ENSGAGG00000001659	POLR1E	99	40.288	Gopherus_agassizii
ENSMAMG00000001260	polr1e	99	43.262	ENSGGOG00000001882	POLR1E	99	50.442	Gorilla_gorilla
ENSMAMG00000001260	polr1e	99	76.372	ENSHBUG00000002559	polr1e	99	76.372	Haplochromis_burtoni
ENSMAMG00000001260	polr1e	99	46.081	ENSHGLG00000002036	POLR1E	100	46.081	Heterocephalus_glaber_female
ENSMAMG00000001260	polr1e	99	46.318	ENSHGLG00100012784	POLR1E	100	46.318	Heterocephalus_glaber_male
ENSMAMG00000001260	polr1e	99	70.120	ENSHCOG00000002774	polr1e	99	70.361	Hippocampus_comes
ENSMAMG00000001260	polr1e	99	56.595	ENSIPUG00000003019	polr1e	100	56.595	Ictalurus_punctatus
ENSMAMG00000001260	polr1e	99	44.258	ENSSTOG00000009810	POLR1E	99	44.258	Ictidomys_tridecemlineatus
ENSMAMG00000001260	polr1e	97	45.343	ENSJJAG00000020731	Polr1e	93	45.343	Jaculus_jaculus
ENSMAMG00000001260	polr1e	99	75.904	ENSKMAG00000000046	polr1e	99	75.904	Kryptolebias_marmoratus
ENSMAMG00000001260	polr1e	100	76.190	ENSLBEG00000003104	polr1e	100	76.190	Labrus_bergylta
ENSMAMG00000001260	polr1e	85	49.036	ENSLACG00000003416	POLR1E	99	49.036	Latimeria_chalumnae
ENSMAMG00000001260	polr1e	99	51.667	ENSLOCG00000012859	polr1e	99	51.667	Lepisosteus_oculatus
ENSMAMG00000001260	polr1e	99	42.925	ENSLAFG00000012831	POLR1E	99	42.925	Loxodonta_africana
ENSMAMG00000001260	polr1e	99	42.755	ENSMFAG00000045465	POLR1E	99	49.558	Macaca_fascicularis
ENSMAMG00000001260	polr1e	99	42.755	ENSMMUG00000017892	POLR1E	99	49.558	Macaca_mulatta
ENSMAMG00000001260	polr1e	99	39.492	ENSMNEG00000040283	POLR1E	94	47.727	Macaca_nemestrina
ENSMAMG00000001260	polr1e	99	42.755	ENSMLEG00000031135	POLR1E	99	49.558	Mandrillus_leucophaeus
ENSMAMG00000001260	polr1e	99	76.134	ENSMZEG00005021536	polr1e	99	76.134	Maylandia_zebra
ENSMAMG00000001260	polr1e	99	42.180	ENSMAUG00000021044	Polr1e	96	42.180	Mesocricetus_auratus
ENSMAMG00000001260	polr1e	99	43.943	ENSMICG00000003673	POLR1E	99	43.943	Microcebus_murinus
ENSMAMG00000001260	polr1e	99	41.943	ENSMOCG00000012920	Polr1e	96	41.943	Microtus_ochrogaster
ENSMAMG00000001260	polr1e	99	75.000	ENSMMOG00000007391	polr1e	99	75.000	Mola_mola
ENSMAMG00000001260	polr1e	95	43.781	ENSMODG00000002884	POLR1E	98	43.781	Monodelphis_domestica
ENSMAMG00000001260	polr1e	99	78.998	ENSMALG00000002665	polr1e	99	78.998	Monopterus_albus
ENSMAMG00000001260	polr1e	99	42.344	MGP_CAROLIEiJ_G0025967	Polr1e	97	43.073	Mus_caroli
ENSMAMG00000001260	polr1e	99	43.230	ENSMUSG00000028318	Polr1e	97	44.000	Mus_musculus
ENSMAMG00000001260	polr1e	98	44.096	MGP_PahariEiJ_G0024114	Polr1e	97	44.612	Mus_pahari
ENSMAMG00000001260	polr1e	98	43.750	MGP_SPRETEiJ_G0026930	Polr1e	97	44.250	Mus_spretus
ENSMAMG00000001260	polr1e	99	39.703	ENSMPUG00000006040	POLR1E	99	39.066	Mustela_putorius_furo
ENSMAMG00000001260	polr1e	99	44.893	ENSMLUG00000012688	POLR1E	96	44.893	Myotis_lucifugus
ENSMAMG00000001260	polr1e	97	45.098	ENSNGAG00000002520	Polr1e	93	45.098	Nannospalax_galili
ENSMAMG00000001260	polr1e	99	76.372	ENSNBRG00000016822	polr1e	99	76.372	Neolamprologus_brichardi
ENSMAMG00000001260	polr1e	99	43.026	ENSNLEG00000003616	POLR1E	99	47.863	Nomascus_leucogenys
ENSMAMG00000001260	polr1e	73	50.222	ENSMEUG00000015372	-	80	50.222	Notamacropus_eugenii
ENSMAMG00000001260	polr1e	85	39.444	ENSOPRG00000014206	POLR1E	99	39.444	Ochotona_princeps
ENSMAMG00000001260	polr1e	97	46.569	ENSODEG00000014565	POLR1E	94	46.569	Octodon_degus
ENSMAMG00000001260	polr1e	99	76.372	ENSONIG00000008921	polr1e	99	76.372	Oreochromis_niloticus
ENSMAMG00000001260	polr1e	99	44.575	ENSOCUG00000024773	POLR1E	99	44.575	Oryctolagus_cuniculus
ENSMAMG00000001260	polr1e	99	71.566	ENSORLG00000005143	polr1e	99	71.566	Oryzias_latipes
ENSMAMG00000001260	polr1e	92	68.571	ENSORLG00020007271	polr1e	99	68.571	Oryzias_latipes_hni
ENSMAMG00000001260	polr1e	99	71.566	ENSORLG00015000137	polr1e	99	71.566	Oryzias_latipes_hsok
ENSMAMG00000001260	polr1e	99	70.813	ENSOMEG00000013264	polr1e	99	70.813	Oryzias_melastigma
ENSMAMG00000001260	polr1e	99	43.230	ENSOGAG00000012981	POLR1E	97	43.230	Otolemur_garnettii
ENSMAMG00000001260	polr1e	97	47.059	ENSOARG00000011465	POLR1E	93	47.059	Ovis_aries
ENSMAMG00000001260	polr1e	99	43.026	ENSPPAG00000034566	POLR1E	99	47.863	Pan_paniscus
ENSMAMG00000001260	polr1e	99	43.705	ENSPPRG00000005649	POLR1E	99	43.705	Panthera_pardus
ENSMAMG00000001260	polr1e	99	43.705	ENSPTIG00000009774	POLR1E	99	43.705	Panthera_tigris_altaica
ENSMAMG00000001260	polr1e	99	43.026	ENSPTRG00000020944	POLR1E	99	47.863	Pan_troglodytes
ENSMAMG00000001260	polr1e	99	42.755	ENSPANG00000025563	POLR1E	99	49.558	Papio_anubis
ENSMAMG00000001260	polr1e	99	58.095	ENSPKIG00000003562	polr1e	99	58.095	Paramormyrops_kingsleyae
ENSMAMG00000001260	polr1e	97	42.543	ENSPSIG00000003274	POLR1E	95	43.032	Pelodiscus_sinensis
ENSMAMG00000001260	polr1e	95	65.743	ENSPMGG00000024169	polr1e	96	65.743	Periophthalmus_magnuspinnatus
ENSMAMG00000001260	polr1e	99	37.470	ENSPEMG00000022300	-	96	37.470	Peromyscus_maniculatus_bairdii
ENSMAMG00000001260	polr1e	99	42.654	ENSPEMG00000019151	-	96	42.654	Peromyscus_maniculatus_bairdii
ENSMAMG00000001260	polr1e	98	44.928	ENSPCIG00000014798	POLR1E	99	44.928	Phascolarctos_cinereus
ENSMAMG00000001260	polr1e	99	70.203	ENSPFOG00000019627	polr1e	99	70.203	Poecilia_formosa
ENSMAMG00000001260	polr1e	99	74.699	ENSPLAG00000022679	polr1e	99	74.699	Poecilia_latipinna
ENSMAMG00000001260	polr1e	85	75.487	ENSPMEG00000022123	polr1e	93	75.487	Poecilia_mexicana
ENSMAMG00000001260	polr1e	99	73.735	ENSPREG00000009470	polr1e	99	73.735	Poecilia_reticulata
ENSMAMG00000001260	polr1e	99	43.262	ENSPPYG00000019061	POLR1E	99	43.262	Pongo_abelii
ENSMAMG00000001260	polr1e	54	36.889	ENSPCAG00000004891	POLR1E	74	36.889	Procavia_capensis
ENSMAMG00000001260	polr1e	99	43.230	ENSPCOG00000027448	POLR1E	99	43.230	Propithecus_coquereli
ENSMAMG00000001260	polr1e	95	43.890	ENSPVAG00000007940	POLR1E	84	43.890	Pteropus_vampyrus
ENSMAMG00000001260	polr1e	99	76.372	ENSPNYG00000001032	polr1e	99	76.372	Pundamilia_nyererei
ENSMAMG00000001260	polr1e	99	57.692	ENSPNAG00000006987	polr1e	99	57.692	Pygocentrus_nattereri
ENSMAMG00000001260	polr1e	97	42.157	ENSRNOG00000012664	Polr1e	93	42.157	Rattus_norvegicus
ENSMAMG00000001260	polr1e	95	43.609	ENSRBIG00000034214	POLR1E	99	44.094	Rhinopithecus_bieti
ENSMAMG00000001260	polr1e	99	42.755	ENSRROG00000031986	POLR1E	99	49.558	Rhinopithecus_roxellana
ENSMAMG00000001260	polr1e	97	43.627	ENSSBOG00000021415	POLR1E	97	43.627	Saimiri_boliviensis_boliviensis
ENSMAMG00000001260	polr1e	82	44.348	ENSSHAG00000016084	POLR1E	95	44.348	Sarcophilus_harrisii
ENSMAMG00000001260	polr1e	99	59.330	ENSSFOG00015002293	polr1e	100	59.330	Scleropages_formosus
ENSMAMG00000001260	polr1e	99	77.804	ENSSMAG00000011672	polr1e	94	77.804	Scophthalmus_maximus
ENSMAMG00000001260	polr1e	99	78.520	ENSSDUG00000022279	polr1e	99	78.520	Seriola_dumerili
ENSMAMG00000001260	polr1e	99	78.043	ENSSLDG00000024918	polr1e	99	78.043	Seriola_lalandi_dorsalis
ENSMAMG00000001260	polr1e	55	39.655	ENSSARG00000009810	-	58	39.655	Sorex_araneus
ENSMAMG00000001260	polr1e	99	43.062	ENSSPUG00000009499	POLR1E	99	43.062	Sphenodon_punctatus
ENSMAMG00000001260	polr1e	99	77.590	ENSSPAG00000021240	polr1e	99	77.590	Stegastes_partitus
ENSMAMG00000001260	polr1e	99	43.468	ENSSSCG00000005347	POLR1E	99	43.468	Sus_scrofa
ENSMAMG00000001260	polr1e	94	39.462	ENSTGUG00000007169	POLR1E	99	39.462	Taeniopygia_guttata
ENSMAMG00000001260	polr1e	99	69.690	ENSTRUG00000020779	polr1e	100	70.079	Takifugu_rubripes
ENSMAMG00000001260	polr1e	99	72.902	ENSTNIG00000017812	polr1e	100	72.902	Tetraodon_nigroviridis
ENSMAMG00000001260	polr1e	99	43.943	ENSTBEG00000013786	POLR1E	88	43.943	Tupaia_belangeri
ENSMAMG00000001260	polr1e	94	44.612	ENSTTRG00000008294	POLR1E	84	44.612	Tursiops_truncatus
ENSMAMG00000001260	polr1e	99	43.705	ENSUAMG00000012474	POLR1E	100	45.924	Ursus_americanus
ENSMAMG00000001260	polr1e	99	43.705	ENSUMAG00000011496	POLR1E	99	43.705	Ursus_maritimus
ENSMAMG00000001260	polr1e	86	39.726	ENSVPAG00000009048	POLR1E	84	39.726	Vicugna_pacos
ENSMAMG00000001260	polr1e	99	42.993	ENSVVUG00000019954	POLR1E	99	42.993	Vulpes_vulpes
ENSMAMG00000001260	polr1e	95	42.822	ENSXETG00000006533	polr1e	95	42.822	Xenopus_tropicalis
ENSMAMG00000001260	polr1e	99	70.602	ENSXCOG00000013706	polr1e	99	70.602	Xiphophorus_couchianus
ENSMAMG00000001260	polr1e	99	75.181	ENSXMAG00000012484	polr1e	99	75.181	Xiphophorus_maculatus