EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000001525 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 2177 bases
Position: chrOOHQ01000107.1:1547370-1549546
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000002163	zf-CCCH	PF00642.24	2.3e-36	1	5
ENSMAMP00000002163	zf-CCCH	PF00642.24	2.3e-36	2	5
ENSMAMP00000002163	zf-CCCH	PF00642.24	2.3e-36	3	5
ENSMAMP00000002163	zf-CCCH	PF00642.24	2.3e-36	4	5
ENSMAMP00000002163	zf-CCCH	PF00642.24	2.3e-36	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000002209	-	1388	-	ENSMAMP00000002163	371 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000001525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000001525's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000001525	cth1	58	71.364	ENSAPOG00000012552	cth1	75	70.320	Acanthochromis_polyacanthus
ENSMAMG00000001525	cth1	53	66.667	ENSACIG00000016026	cth1	77	59.524	Amphilophus_citrinellus
ENSMAMG00000001525	cth1	60	74.554	ENSAOCG00000001644	cth1	72	73.543	Amphiprion_ocellaris
ENSMAMG00000001525	cth1	60	74.554	ENSAPEG00000008930	cth1	72	73.543	Amphiprion_percula
ENSMAMG00000001525	cth1	99	61.497	ENSATEG00000002281	cth1	96	61.497	Anabas_testudineus
ENSMAMG00000001525	cth1	65	60.000	ENSACLG00000015353	cth1	84	60.000	Astatotilapia_calliptera
ENSMAMG00000001525	cth1	97	46.027	ENSAMXG00000025717	cth1	75	57.430	Astyanax_mexicanus
ENSMAMG00000001525	cth1	60	68.584	ENSCSEG00000014617	cth1	99	60.743	Cynoglossus_semilaevis
ENSMAMG00000001525	cth1	64	58.159	ENSCVAG00000001680	cth1	65	50.943	Cyprinodon_variegatus
ENSMAMG00000001525	cth1	60	62.896	ENSDARG00000057328	cth1	66	62.896	Danio_rerio
ENSMAMG00000001525	cth1	62	58.650	ENSELUG00000012738	cth1	69	58.650	Esox_lucius
ENSMAMG00000001525	cth1	62	60.338	ENSFHEG00000022665	cth1	99	47.312	Fundulus_heteroclitus
ENSMAMG00000001525	cth1	65	59.016	ENSGMOG00000007360	cth1	99	50.663	Gadus_morhua
ENSMAMG00000001525	cth1	99	48.787	ENSGAFG00000019288	cth1	99	48.525	Gambusia_affinis
ENSMAMG00000001525	cth1	65	63.115	ENSGACG00000000802	cth1	99	52.022	Gasterosteus_aculeatus
ENSMAMG00000001525	cth1	65	59.671	ENSHBUG00000014400	cth1	80	59.671	Haplochromis_burtoni
ENSMAMG00000001525	cth1	62	52.893	ENSHCOG00000010276	cth1	82	51.639	Hippocampus_comes
ENSMAMG00000001525	cth1	97	47.922	ENSIPUG00000018040	cth1	65	61.086	Ictalurus_punctatus
ENSMAMG00000001525	cth1	60	64.126	ENSKMAG00000005944	cth1	99	49.734	Kryptolebias_marmoratus
ENSMAMG00000001525	cth1	63	70.464	ENSLBEG00000019253	cth1	99	60.471	Labrus_bergylta
ENSMAMG00000001525	cth1	75	45.161	ENSLOCG00000002047	cth1	99	44.700	Lepisosteus_oculatus
ENSMAMG00000001525	cth1	65	59.671	ENSMZEG00005022335	cth1	80	59.671	Maylandia_zebra
ENSMAMG00000001525	cth1	55	72.549	ENSMMOG00000020518	cth1	94	57.270	Mola_mola
ENSMAMG00000001525	cth1	99	67.539	ENSMALG00000020738	cth1	99	67.539	Monopterus_albus
ENSMAMG00000001525	cth1	56	60.096	ENSNBRG00000022789	cth1	65	60.096	Neolamprologus_brichardi
ENSMAMG00000001525	cth1	65	60.166	ENSONIG00000021318	cth1	80	60.166	Oreochromis_niloticus
ENSMAMG00000001525	cth1	63	55.745	ENSORLG00000022847	cth1	88	47.522	Oryzias_latipes
ENSMAMG00000001525	cth1	63	55.696	ENSORLG00020011979	cth1	88	47.977	Oryzias_latipes_hni
ENSMAMG00000001525	cth1	99	55.745	ENSORLG00015013084	cth1	88	47.522	Oryzias_latipes_hsok
ENSMAMG00000001525	cth1	95	59.447	ENSOMEG00000005809	cth1	57	63.000	Oryzias_melastigma
ENSMAMG00000001525	cth1	61	52.766	ENSPKIG00000015883	cth1	95	42.582	Paramormyrops_kingsleyae
ENSMAMG00000001525	cth1	63	69.456	ENSPMGG00000004275	cth1	99	60.267	Periophthalmus_magnuspinnatus
ENSMAMG00000001525	cth1	99	48.656	ENSPFOG00000013583	cth1	93	48.248	Poecilia_formosa
ENSMAMG00000001525	cth1	99	48.518	ENSPLAG00000018158	cth1	93	48.518	Poecilia_latipinna
ENSMAMG00000001525	cth1	99	47.861	ENSPMEG00000005744	cth1	99	47.453	Poecilia_mexicana
ENSMAMG00000001525	cth1	99	46.612	ENSPREG00000004099	cth1	99	48.370	Poecilia_reticulata
ENSMAMG00000001525	cth1	60	58.744	ENSPNYG00000016705	cth1	68	60.577	Pundamilia_nyererei
ENSMAMG00000001525	cth1	97	46.389	ENSPNAG00000013147	cth1	95	47.493	Pygocentrus_nattereri
ENSMAMG00000001525	cth1	92	44.729	ENSSFOG00015017190	cth1	56	61.081	Scleropages_formosus
ENSMAMG00000001525	cth1	65	68.980	ENSSMAG00000007977	cth1	99	60.526	Scophthalmus_maximus
ENSMAMG00000001525	cth1	63	71.250	ENSSDUG00000004321	cth1	99	61.214	Seriola_dumerili
ENSMAMG00000001525	cth1	99	58.886	ENSSLDG00000012760	cth1	99	62.632	Seriola_lalandi_dorsalis
ENSMAMG00000001525	cth1	99	58.667	ENSSLDG00000004516	-	99	62.434	Seriola_lalandi_dorsalis
ENSMAMG00000001525	cth1	99	58.667	ENSSLDG00000010023	-	99	62.434	Seriola_lalandi_dorsalis
ENSMAMG00000001525	cth1	62	69.099	ENSSPAG00000018659	cth1	73	71.121	Stegastes_partitus
ENSMAMG00000001525	cth1	63	62.553	ENSTRUG00000012770	cth1	99	51.323	Takifugu_rubripes
ENSMAMG00000001525	cth1	60	61.883	ENSTNIG00000000740	cth1	99	49.206	Tetraodon_nigroviridis
ENSMAMG00000001525	cth1	61	51.770	ENSXCOG00000003710	cth1	81	51.770	Xiphophorus_couchianus
ENSMAMG00000001525	cth1	99	48.925	ENSXMAG00000023885	cth1	99	47.849	Xiphophorus_maculatus