EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000001618 (Gene tree)
Gene ID: 113140673
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 30710 bases
Position: chrOOHQ01000092.1:11711714-11742423
Accession: 113140673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000002334	zf-C2H2_jaz	PF12171.8	5.5e-06	1	1
ENSMAMP00000002322	zf-C2H2_jaz	PF12171.8	5.7e-06	1	1
ENSMAMP00000002322	G-patch	PF01585.23	8.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000002370	-	9255	-	ENSMAMP00000002322	1446 (aa)	-	-
ENSMAMT00000002382	-	8963	-	ENSMAMP00000002334	1411 (aa)	XP_026180354	UPI000E45E3E0

Gene Model

Click here to download ENSMAMG00000001618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000001618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000001618	gpatch8	100	90.304	ENSAPOG00000023938	gpatch8	100	90.304	Acanthochromis_polyacanthus
ENSMAMG00000001618	gpatch8	100	86.812	ENSACIG00000012241	gpatch8	100	85.227	Amphilophus_citrinellus
ENSMAMG00000001618	gpatch8	100	90.021	ENSAOCG00000018102	gpatch8	100	90.021	Amphiprion_ocellaris
ENSMAMG00000001618	gpatch8	100	89.880	ENSAPEG00000016776	gpatch8	100	89.880	Amphiprion_percula
ENSMAMG00000001618	gpatch8	100	87.677	ENSATEG00000003247	gpatch8	99	87.394	Anabas_testudineus
ENSMAMG00000001618	gpatch8	100	86.229	ENSACLG00000004165	gpatch8	99	86.299	Astatotilapia_calliptera
ENSMAMG00000001618	gpatch8	100	82.261	ENSCSEG00000021277	gpatch8	100	82.120	Cynoglossus_semilaevis
ENSMAMG00000001618	gpatch8	100	81.831	ENSCVAG00000013477	gpatch8	100	81.831	Cyprinodon_variegatus
ENSMAMG00000001618	gpatch8	100	64.145	ENSDARG00000059768	gpatch8	56	60.895	Danio_rerio
ENSMAMG00000001618	gpatch8	60	64.625	ENSELUG00000019920	gpatch8	57	64.005	Esox_lucius
ENSMAMG00000001618	gpatch8	54	72.014	ENSFHEG00000005791	gpatch8	100	79.466	Fundulus_heteroclitus
ENSMAMG00000001618	gpatch8	100	81.568	ENSGAFG00000018138	gpatch8	100	80.872	Gambusia_affinis
ENSMAMG00000001618	gpatch8	100	86.187	ENSHBUG00000002669	gpatch8	100	86.469	Haplochromis_burtoni
ENSMAMG00000001618	gpatch8	75	58.752	ENSHGLG00100010738	GPATCH8	97	55.238	Heterocephalus_glaber_male
ENSMAMG00000001618	gpatch8	100	73.043	ENSHCOG00000017518	gpatch8	100	72.508	Hippocampus_comes
ENSMAMG00000001618	gpatch8	57	57.669	ENSIPUG00000015431	gpatch8	55	58.637	Ictalurus_punctatus
ENSMAMG00000001618	gpatch8	100	82.593	ENSKMAG00000018364	gpatch8	99	82.875	Kryptolebias_marmoratus
ENSMAMG00000001618	gpatch8	100	85.664	ENSLBEG00000023352	gpatch8	99	85.664	Labrus_bergylta
ENSMAMG00000001618	gpatch8	60	77.778	ENSLOCG00000012265	gpatch8	72	76.056	Lepisosteus_oculatus
ENSMAMG00000001618	gpatch8	100	86.158	ENSMZEG00005022584	gpatch8	99	86.229	Maylandia_zebra
ENSMAMG00000001618	gpatch8	58	82.182	ENSMMOG00000020472	gpatch8	95	82.923	Mola_mola
ENSMAMG00000001618	gpatch8	100	87.147	ENSMALG00000004204	gpatch8	100	84.718	Monopterus_albus
ENSMAMG00000001618	gpatch8	100	86.511	ENSNBRG00000016402	gpatch8	100	85.274	Neolamprologus_brichardi
ENSMAMG00000001618	gpatch8	59	60.791	ENSOPRG00000008816	GPATCH8	72	47.890	Ochotona_princeps
ENSMAMG00000001618	gpatch8	100	83.628	ENSONIG00000001292	gpatch8	100	86.192	Oreochromis_niloticus
ENSMAMG00000001618	gpatch8	60	73.667	ENSORLG00000028497	gpatch8	100	78.556	Oryzias_latipes
ENSMAMG00000001618	gpatch8	54	56.379	ENSPKIG00000004860	GPATCH8	54	56.479	Paramormyrops_kingsleyae
ENSMAMG00000001618	gpatch8	60	53.779	ENSPKIG00000018753	gpatch8	50	51.876	Paramormyrops_kingsleyae
ENSMAMG00000001618	gpatch8	100	78.497	ENSPMGG00000000730	gpatch8	99	78.000	Periophthalmus_magnuspinnatus
ENSMAMG00000001618	gpatch8	100	81.594	ENSPFOG00000014833	gpatch8	100	81.568	Poecilia_formosa
ENSMAMG00000001618	gpatch8	100	81.382	ENSPLAG00000001035	gpatch8	100	81.367	Poecilia_latipinna
ENSMAMG00000001618	gpatch8	100	81.876	ENSPMEG00000024032	gpatch8	100	81.568	Poecilia_mexicana
ENSMAMG00000001618	gpatch8	100	81.805	ENSPREG00000008911	gpatch8	100	81.594	Poecilia_reticulata
ENSMAMG00000001618	gpatch8	100	86.370	ENSPNYG00000009426	gpatch8	100	85.379	Pundamilia_nyererei
ENSMAMG00000001618	gpatch8	57	58.926	ENSPNAG00000016200	gpatch8	55	60.530	Pygocentrus_nattereri
ENSMAMG00000001618	gpatch8	54	58.115	ENSSFOG00015004299	GPATCH8	55	59.408	Scleropages_formosus
ENSMAMG00000001618	gpatch8	54	57.403	ENSSFOG00015021377	-	55	57.623	Scleropages_formosus
ENSMAMG00000001618	gpatch8	100	91.113	ENSSDUG00000018065	gpatch8	99	91.113	Seriola_dumerili
ENSMAMG00000001618	gpatch8	100	91.338	ENSSLDG00000009225	gpatch8	100	89.460	Seriola_lalandi_dorsalis
ENSMAMG00000001618	gpatch8	100	90.234	ENSSPAG00000011368	gpatch8	99	90.234	Stegastes_partitus
ENSMAMG00000001618	gpatch8	100	78.902	ENSTRUG00000020474	gpatch8	100	78.500	Takifugu_rubripes
ENSMAMG00000001618	gpatch8	59	60.627	ENSTBEG00000009486	GPATCH8	56	60.279	Tupaia_belangeri
ENSMAMG00000001618	gpatch8	100	81.197	ENSXCOG00000016680	gpatch8	100	80.414	Xiphophorus_couchianus
ENSMAMG00000001618	gpatch8	100	80.859	ENSXMAG00000009217	gpatch8	100	80.929	Xiphophorus_maculatus