EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000001760 (Gene tree)
Gene ID: 113138031
Gene Symbol: -
Alias: rbm4l|wu:fc25a01
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 5718 bases
Position: chrOOHQ01000107.1:1734432-1740149
Accession: 113138031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000002485	zf-CCHC	PF00098.23	4.4e-06	1	1
ENSMAMP00000002493	zf-CCHC	PF00098.23	4.4e-06	1	1
ENSMAMP00000002485	RRM_5	PF13893.6	8.2e-09	1	1
ENSMAMP00000002493	RRM_5	PF13893.6	8.2e-09	1	1
ENSMAMP00000002485	RRM_1	PF00076.22	1.2e-30	1	2
ENSMAMP00000002485	RRM_1	PF00076.22	1.2e-30	2	2
ENSMAMP00000002493	RRM_1	PF00076.22	1.2e-30	1	2
ENSMAMP00000002493	RRM_1	PF00076.22	1.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000002536	-	4373	-	ENSMAMP00000002485	382 (aa)	XP_026175934	UPI000E45CDE2
ENSMAMT00000002545	-	5329	-	ENSMAMP00000002493	382 (aa)	XP_026175934	UPI000E45CDE2

Gene Model

Click here to download ENSMAMG00000001760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000001760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000001760	-	98	50.000	ENSMAMG00000001765	rbm4.1	98	51.914
ENSMAMG00000001760	-	68	53.595	ENSMAMG00000004701	rbm4.3	94	41.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000001760	-	95	49.038	ENSAPOG00000012353	rbm4.1	95	50.728	Acanthochromis_polyacanthus
ENSMAMG00000001760	-	98	48.578	ENSACIG00000016482	rbm4.1	98	50.355	Amphilophus_citrinellus
ENSMAMG00000001760	-	95	48.921	ENSAOCG00000010915	rbm4.1	95	50.485	Amphiprion_ocellaris
ENSMAMG00000001760	-	95	48.921	ENSAPEG00000009494	rbm4.1	95	50.485	Amphiprion_percula
ENSMAMG00000001760	-	98	49.528	ENSATEG00000001904	rbm4.1	98	52.153	Anabas_testudineus
ENSMAMG00000001760	-	100	74.677	ENSACLG00000007740	-	100	74.935	Astatotilapia_calliptera
ENSMAMG00000001760	-	98	48.571	ENSACLG00000007722	rbm4.1	98	50.355	Astatotilapia_calliptera
ENSMAMG00000001760	-	96	55.172	ENSAMXG00000036611	rbm4.1	95	55.172	Astyanax_mexicanus
ENSMAMG00000001760	-	100	72.751	ENSCSEG00000014359	-	100	73.008	Cynoglossus_semilaevis
ENSMAMG00000001760	-	99	47.506	ENSCSEG00000014365	rbm4.1	99	47.506	Cynoglossus_semilaevis
ENSMAMG00000001760	-	100	47.907	ENSCVAG00000019349	rbm4.1	99	50.711	Cyprinodon_variegatus
ENSMAMG00000001760	-	98	53.247	ENSDARG00000055080	rbm4.2	97	55.670	Danio_rerio
ENSMAMG00000001760	-	99	49.652	ENSDARG00000036386	rbm4.1	79	71.014	Danio_rerio
ENSMAMG00000001760	-	97	51.196	ENSELUG00000013205	rbm4.1	97	51.202	Esox_lucius
ENSMAMG00000001760	-	94	51.741	ENSFHEG00000022926	rbm4.1	94	50.495	Fundulus_heteroclitus
ENSMAMG00000001760	-	100	69.152	ENSGMOG00000007455	-	100	71.867	Gadus_morhua
ENSMAMG00000001760	-	100	51.887	ENSGAFG00000019302	rbm4.1	99	51.887	Gambusia_affinis
ENSMAMG00000001760	-	100	76.684	ENSGACG00000000821	-	100	75.907	Gasterosteus_aculeatus
ENSMAMG00000001760	-	94	51.366	ENSGACG00000000822	rbm4.1	94	51.093	Gasterosteus_aculeatus
ENSMAMG00000001760	-	98	48.571	ENSHBUG00000011610	rbm4.1	98	50.355	Haplochromis_burtoni
ENSMAMG00000001760	-	96	45.926	ENSHCOG00000011403	rbm4.1	99	45.926	Hippocampus_comes
ENSMAMG00000001760	-	99	48.724	ENSIPUG00000022931	rbm4.1	99	48.951	Ictalurus_punctatus
ENSMAMG00000001760	-	93	53.659	ENSIPUG00000022937	rbm4.2	97	53.590	Ictalurus_punctatus
ENSMAMG00000001760	-	100	60.194	ENSKMAG00000006528	-	100	61.425	Kryptolebias_marmoratus
ENSMAMG00000001760	-	95	52.500	ENSKMAG00000006556	rbm4.1	95	52.500	Kryptolebias_marmoratus
ENSMAMG00000001760	-	98	47.319	ENSLBEG00000019782	rbm4.1	97	49.403	Labrus_bergylta
ENSMAMG00000001760	-	100	75.907	ENSLBEG00000019756	-	100	78.497	Labrus_bergylta
ENSMAMG00000001760	-	98	48.571	ENSMZEG00005009205	rbm4.1	98	50.355	Maylandia_zebra
ENSMAMG00000001760	-	55	67.606	ENSMZEG00005028158	-	69	68.075	Maylandia_zebra
ENSMAMG00000001760	-	100	49.883	ENSMMOG00000020479	rbm4.1	99	51.044	Mola_mola
ENSMAMG00000001760	-	100	86.269	ENSMALG00000020557	-	100	84.974	Monopterus_albus
ENSMAMG00000001760	-	98	50.591	ENSMALG00000020544	rbm4.1	98	51.914	Monopterus_albus
ENSMAMG00000001760	-	98	48.810	ENSNBRG00000017755	rbm4.1	98	50.591	Neolamprologus_brichardi
ENSMAMG00000001760	-	98	48.810	ENSONIG00000015730	rbm4.1	98	50.591	Oreochromis_niloticus
ENSMAMG00000001760	-	95	48.655	ENSORLG00000012496	rbm4.1	95	49.386	Oryzias_latipes
ENSMAMG00000001760	-	95	48.655	ENSORLG00020012454	rbm4.1	95	49.386	Oryzias_latipes_hni
ENSMAMG00000001760	-	95	48.403	ENSORLG00015013678	rbm4.1	95	49.386	Oryzias_latipes_hsok
ENSMAMG00000001760	-	95	49.132	ENSOMEG00000001001	rbm4.1	95	50.124	Oryzias_melastigma
ENSMAMG00000001760	-	98	46.119	ENSPKIG00000020805	rbm4.1	85	73.188	Paramormyrops_kingsleyae
ENSMAMG00000001760	-	53	52.941	ENSPMAG00000003433	rbm4.2	92	52.941	Petromyzon_marinus
ENSMAMG00000001760	-	100	67.342	ENSPFOG00000012685	-	100	66.835	Poecilia_formosa
ENSMAMG00000001760	-	100	52.123	ENSPFOG00000012675	rbm4.1	99	52.123	Poecilia_formosa
ENSMAMG00000001760	-	100	52.123	ENSPLAG00000018572	rbm4.1	99	52.123	Poecilia_latipinna
ENSMAMG00000001760	-	100	52.123	ENSPMEG00000006290	rbm4.1	99	52.123	Poecilia_mexicana
ENSMAMG00000001760	-	100	63.776	ENSPREG00000003764	-	100	62.755	Poecilia_reticulata
ENSMAMG00000001760	-	100	52.123	ENSPREG00000003724	rbm4.1	99	52.123	Poecilia_reticulata
ENSMAMG00000001760	-	98	48.571	ENSPNYG00000004662	rbm4.1	98	50.355	Pundamilia_nyererei
ENSMAMG00000001760	-	96	51.781	ENSPNAG00000002539	rbm4.1	98	52.758	Pygocentrus_nattereri
ENSMAMG00000001760	-	99	52.488	ENSPNAG00000013057	rbm4.2	99	52.985	Pygocentrus_nattereri
ENSMAMG00000001760	-	98	50.121	ENSSFOG00015021996	sf1	98	50.120	Scleropages_formosus
ENSMAMG00000001760	-	98	49.161	ENSSMAG00000007571	rbm4.1	98	48.000	Scophthalmus_maximus
ENSMAMG00000001760	-	98	48.140	ENSSDUG00000003925	rbm4.1	98	50.957	Seriola_dumerili
ENSMAMG00000001760	-	100	86.010	ENSSDUG00000003936	-	100	86.010	Seriola_dumerili
ENSMAMG00000001760	-	98	48.140	ENSSLDG00000013147	rbm4.1	98	50.957	Seriola_lalandi_dorsalis
ENSMAMG00000001760	-	100	84.456	ENSSLDG00000013157	-	100	84.456	Seriola_lalandi_dorsalis
ENSMAMG00000001760	-	98	47.281	ENSSPAG00000019053	rbm4.1	98	50.591	Stegastes_partitus
ENSMAMG00000001760	-	100	80.570	ENSSPAG00000019046	-	100	79.275	Stegastes_partitus
ENSMAMG00000001760	-	100	48.956	ENSTRUG00000013334	rbm4.1	99	48.372	Takifugu_rubripes
ENSMAMG00000001760	-	100	70.466	ENSTRUG00000013328	-	100	69.430	Takifugu_rubripes
ENSMAMG00000001760	-	100	71.169	ENSTNIG00000000316	-	100	70.130	Tetraodon_nigroviridis
ENSMAMG00000001760	-	94	49.454	ENSTNIG00000004821	rbm4.1	93	50.546	Tetraodon_nigroviridis
ENSMAMG00000001760	-	52	61.194	ENSXETG00000026649	rbm4b	95	45.013	Xenopus_tropicalis
ENSMAMG00000001760	-	100	52.123	ENSXCOG00000003731	rbm4.1	99	52.123	Xiphophorus_couchianus
ENSMAMG00000001760	-	100	67.005	ENSXMAG00000008059	-	100	66.751	Xiphophorus_maculatus
ENSMAMG00000001760	-	100	52.123	ENSXMAG00000008069	rbm4.1	99	52.123	Xiphophorus_maculatus