EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000001765 (Gene tree)
Gene ID: 113138023
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3255 bases
Position: chrOOHQ01000107.1:1740169-1743423
Accession: 113138023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000002502	zf-CCHC	PF00098.23	3.6e-07	1	1
ENSMAMP00000002502	RRM_5	PF13893.6	7.2e-08	1	1
ENSMAMP00000002502	RRM_1	PF00076.22	8.8e-31	1	2
ENSMAMP00000002502	RRM_1	PF00076.22	8.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000002554	-	2420	-	ENSMAMP00000002502	421 (aa)	XP_026175921	UPI000E464DFC

Gene Model

Click here to download ENSMAMG00000001765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000001765's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000001765	rbm4.1	61	59.821	ENSMAMG00000004715	-	65	58.268
ENSMAMG00000001765	rbm4.1	98	51.914	ENSMAMG00000001760	-	98	50.000
ENSMAMG00000001765	rbm4.1	65	59.211	ENSMAMG00000004701	rbm4.3	96	58.599

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000001765	rbm4.1	100	90.974	ENSAPOG00000012353	rbm4.1	100	90.974	Acanthochromis_polyacanthus
ENSMAMG00000001765	rbm4.1	100	91.924	ENSACIG00000016482	rbm4.1	100	91.924	Amphilophus_citrinellus
ENSMAMG00000001765	rbm4.1	100	92.399	ENSAOCG00000010915	rbm4.1	100	92.399	Amphiprion_ocellaris
ENSMAMG00000001765	rbm4.1	100	92.399	ENSAPEG00000009494	rbm4.1	100	92.399	Amphiprion_percula
ENSMAMG00000001765	rbm4.1	100	95.012	ENSATEG00000001904	rbm4.1	100	95.012	Anabas_testudineus
ENSMAMG00000001765	rbm4.1	100	91.211	ENSACLG00000007722	rbm4.1	100	91.211	Astatotilapia_calliptera
ENSMAMG00000001765	rbm4.1	99	45.991	ENSACLG00000007740	-	99	44.213	Astatotilapia_calliptera
ENSMAMG00000001765	rbm4.1	100	62.884	ENSAMXG00000036611	rbm4.1	100	63.443	Astyanax_mexicanus
ENSMAMG00000001765	rbm4.1	99	48.832	ENSCSEG00000014359	-	99	48.499	Cynoglossus_semilaevis
ENSMAMG00000001765	rbm4.1	100	76.485	ENSCSEG00000014365	rbm4.1	100	76.485	Cynoglossus_semilaevis
ENSMAMG00000001765	rbm4.1	100	80.048	ENSCVAG00000019349	rbm4.1	100	80.048	Cyprinodon_variegatus
ENSMAMG00000001765	rbm4.1	100	68.941	ENSDARG00000036386	rbm4.1	100	68.471	Danio_rerio
ENSMAMG00000001765	rbm4.1	100	66.745	ENSELUG00000013205	rbm4.1	100	64.908	Esox_lucius
ENSMAMG00000001765	rbm4.1	100	79.384	ENSFHEG00000022926	rbm4.1	100	78.910	Fundulus_heteroclitus
ENSMAMG00000001765	rbm4.1	100	67.606	ENSGMOG00000007464	rbm4.1	100	69.340	Gadus_morhua
ENSMAMG00000001765	rbm4.1	92	51.646	ENSGMOG00000007455	-	92	51.621	Gadus_morhua
ENSMAMG00000001765	rbm4.1	100	79.433	ENSGAFG00000019302	rbm4.1	100	78.723	Gambusia_affinis
ENSMAMG00000001765	rbm4.1	100	78.673	ENSGACG00000000822	rbm4.1	100	90.625	Gasterosteus_aculeatus
ENSMAMG00000001765	rbm4.1	97	49.517	ENSGACG00000000821	-	99	47.018	Gasterosteus_aculeatus
ENSMAMG00000001765	rbm4.1	100	91.211	ENSHBUG00000011610	rbm4.1	100	91.211	Haplochromis_burtoni
ENSMAMG00000001765	rbm4.1	96	70.936	ENSHCOG00000011403	rbm4.1	98	71.322	Hippocampus_comes
ENSMAMG00000001765	rbm4.1	100	49.882	ENSIPUG00000022937	rbm4.2	100	50.117	Ictalurus_punctatus
ENSMAMG00000001765	rbm4.1	100	63.470	ENSIPUG00000022931	rbm4.1	100	63.636	Ictalurus_punctatus
ENSMAMG00000001765	rbm4.1	100	78.014	ENSKMAG00000006556	rbm4.1	100	78.014	Kryptolebias_marmoratus
ENSMAMG00000001765	rbm4.1	100	85.986	ENSLBEG00000019782	rbm4.1	100	85.986	Labrus_bergylta
ENSMAMG00000001765	rbm4.1	99	49.649	ENSLBEG00000019756	-	90	60.897	Labrus_bergylta
ENSMAMG00000001765	rbm4.1	100	91.211	ENSMZEG00005009205	rbm4.1	100	91.211	Maylandia_zebra
ENSMAMG00000001765	rbm4.1	100	88.889	ENSMMOG00000020479	rbm4.1	100	88.889	Mola_mola
ENSMAMG00000001765	rbm4.1	98	51.807	ENSMALG00000020557	-	98	49.292	Monopterus_albus
ENSMAMG00000001765	rbm4.1	100	91.686	ENSMALG00000020544	rbm4.1	100	91.686	Monopterus_albus
ENSMAMG00000001765	rbm4.1	100	91.449	ENSNBRG00000017755	rbm4.1	100	91.449	Neolamprologus_brichardi
ENSMAMG00000001765	rbm4.1	100	91.686	ENSONIG00000015730	rbm4.1	100	91.686	Oreochromis_niloticus
ENSMAMG00000001765	rbm4.1	100	79.097	ENSORLG00000012496	rbm4.1	100	79.097	Oryzias_latipes
ENSMAMG00000001765	rbm4.1	100	79.097	ENSORLG00020012454	rbm4.1	100	79.097	Oryzias_latipes_hni
ENSMAMG00000001765	rbm4.1	100	79.335	ENSORLG00015013678	rbm4.1	100	79.335	Oryzias_latipes_hsok
ENSMAMG00000001765	rbm4.1	100	80.048	ENSOMEG00000001001	rbm4.1	100	80.048	Oryzias_melastigma
ENSMAMG00000001765	rbm4.1	100	64.252	ENSPKIG00000020805	rbm4.1	85	79.710	Paramormyrops_kingsleyae
ENSMAMG00000001765	rbm4.1	100	79.196	ENSPFOG00000012675	rbm4.1	100	78.487	Poecilia_formosa
ENSMAMG00000001765	rbm4.1	100	79.196	ENSPLAG00000018572	rbm4.1	100	78.487	Poecilia_latipinna
ENSMAMG00000001765	rbm4.1	100	79.196	ENSPMEG00000006290	rbm4.1	100	78.487	Poecilia_mexicana
ENSMAMG00000001765	rbm4.1	100	79.196	ENSPREG00000003724	rbm4.1	100	78.487	Poecilia_reticulata
ENSMAMG00000001765	rbm4.1	74	61.386	ENSPREG00000003764	-	88	64.706	Poecilia_reticulata
ENSMAMG00000001765	rbm4.1	100	91.211	ENSPNYG00000004662	rbm4.1	100	91.211	Pundamilia_nyererei
ENSMAMG00000001765	rbm4.1	100	52.656	ENSPNAG00000013057	rbm4.2	100	51.972	Pygocentrus_nattereri
ENSMAMG00000001765	rbm4.1	100	67.529	ENSPNAG00000002539	rbm4.1	100	68.150	Pygocentrus_nattereri
ENSMAMG00000001765	rbm4.1	100	64.252	ENSSFOG00015021996	sf1	100	63.551	Scleropages_formosus
ENSMAMG00000001765	rbm4.1	100	86.936	ENSSMAG00000007571	rbm4.1	100	85.036	Scophthalmus_maximus
ENSMAMG00000001765	rbm4.1	97	51.551	ENSSDUG00000003936	-	99	49.766	Seriola_dumerili
ENSMAMG00000001765	rbm4.1	100	95.012	ENSSDUG00000003925	rbm4.1	100	95.012	Seriola_dumerili
ENSMAMG00000001765	rbm4.1	97	49.403	ENSSLDG00000013157	-	99	50.351	Seriola_lalandi_dorsalis
ENSMAMG00000001765	rbm4.1	100	95.012	ENSSLDG00000013147	rbm4.1	100	95.012	Seriola_lalandi_dorsalis
ENSMAMG00000001765	rbm4.1	100	91.943	ENSSPAG00000019053	rbm4.1	100	93.839	Stegastes_partitus
ENSMAMG00000001765	rbm4.1	98	47.962	ENSSPAG00000019046	-	98	46.118	Stegastes_partitus
ENSMAMG00000001765	rbm4.1	98	46.024	ENSTRUG00000013328	-	98	45.093	Takifugu_rubripes
ENSMAMG00000001765	rbm4.1	100	81.235	ENSTRUG00000013334	rbm4.1	100	80.048	Takifugu_rubripes
ENSMAMG00000001765	rbm4.1	82	81.659	ENSTNIG00000004821	rbm4.1	100	56.532	Tetraodon_nigroviridis
ENSMAMG00000001765	rbm4.1	97	47.087	ENSTNIG00000000316	-	97	46.698	Tetraodon_nigroviridis
ENSMAMG00000001765	rbm4.1	100	79.196	ENSXCOG00000003731	rbm4.1	100	78.487	Xiphophorus_couchianus
ENSMAMG00000001765	rbm4.1	71	66.310	ENSXMAG00000008059	-	86	66.310	Xiphophorus_maculatus
ENSMAMG00000001765	rbm4.1	100	78.960	ENSXMAG00000008069	rbm4.1	100	78.251	Xiphophorus_maculatus