EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000002063 (Gene tree)
Gene ID: 113142315
Gene Symbol: utp20
Alias: im:7159098|wu:fb83c08
Full Name: UTP20 small subunit (SSU) processome component
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 17091 bases
Position: chrOOHQ01000056.1:5171640-5188730
Accession: ZDB-GENE-080225-38
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000003437	DRIM	PF07539.12	1.1e-163	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000003518	-	8241	-	ENSMAMP00000003437	2746 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000002063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000002063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000002063	utp20	99	56.019	ENSG00000120800	UTP20	100	55.468	Homo_sapiens
ENSMAMG00000002063	utp20	100	81.363	ENSAPOG00000002429	utp20	100	81.008	Acanthochromis_polyacanthus
ENSMAMG00000002063	utp20	99	56.072	ENSAMEG00000016416	UTP20	100	55.410	Ailuropoda_melanoleuca
ENSMAMG00000002063	utp20	100	80.129	ENSACIG00000007987	utp20	100	80.308	Amphilophus_citrinellus
ENSMAMG00000002063	utp20	60	81.014	ENSAOCG00000015055	utp20	96	80.618	Amphiprion_ocellaris
ENSMAMG00000002063	utp20	100	81.591	ENSAPEG00000011605	utp20	100	81.306	Amphiprion_percula
ENSMAMG00000002063	utp20	98	81.944	ENSATEG00000005601	utp20	100	82.314	Anabas_testudineus
ENSMAMG00000002063	utp20	99	56.789	ENSAPLG00000015651	UTP20	100	56.480	Anas_platyrhynchos
ENSMAMG00000002063	utp20	99	56.385	ENSACAG00000011671	UTP20	100	55.897	Anolis_carolinensis
ENSMAMG00000002063	utp20	99	54.607	ENSANAG00000027152	UTP20	100	54.297	Aotus_nancymaae
ENSMAMG00000002063	utp20	96	82.543	ENSACLG00000008064	utp20	99	82.543	Astatotilapia_calliptera
ENSMAMG00000002063	utp20	100	66.643	ENSAMXG00000021039	utp20	100	66.643	Astyanax_mexicanus
ENSMAMG00000002063	utp20	99	56.985	ENSBTAG00000003239	UTP20	100	56.551	Bos_taurus
ENSMAMG00000002063	utp20	100	56.121	ENSCJAG00000001913	UTP20	100	55.623	Callithrix_jacchus
ENSMAMG00000002063	utp20	99	55.987	ENSCAFG00000006964	UTP20	100	55.976	Canis_familiaris
ENSMAMG00000002063	utp20	99	55.987	ENSCAFG00020024305	UTP20	100	55.976	Canis_lupus_dingo
ENSMAMG00000002063	utp20	99	56.669	ENSCHIG00000009221	UTP20	100	55.873	Capra_hircus
ENSMAMG00000002063	utp20	99	55.575	ENSTSYG00000003040	UTP20	100	55.520	Carlito_syrichta
ENSMAMG00000002063	utp20	99	52.952	ENSCAPG00000014920	UTP20	100	52.718	Cavia_aperea
ENSMAMG00000002063	utp20	100	54.691	ENSCPOG00000003129	UTP20	100	54.057	Cavia_porcellus
ENSMAMG00000002063	utp20	99	55.896	ENSCCAG00000031422	UTP20	100	55.417	Cebus_capucinus
ENSMAMG00000002063	utp20	99	54.216	ENSCATG00000035636	UTP20	100	54.035	Cercocebus_atys
ENSMAMG00000002063	utp20	100	55.476	ENSCLAG00000011569	UTP20	100	55.152	Chinchilla_lanigera
ENSMAMG00000002063	utp20	99	56.323	ENSCSAG00000003388	UTP20	100	55.845	Chlorocebus_sabaeus
ENSMAMG00000002063	utp20	92	72.727	ENSCHOG00000003532	UTP20	94	72.727	Choloepus_hoffmanni
ENSMAMG00000002063	utp20	95	56.575	ENSCPBG00000004844	UTP20	99	57.122	Chrysemys_picta_bellii
ENSMAMG00000002063	utp20	95	57.266	ENSCANG00000034768	UTP20	99	55.830	Colobus_angolensis_palliatus
ENSMAMG00000002063	utp20	99	55.389	ENSCGRG00001017151	Utp20	100	54.950	Cricetulus_griseus_chok1gshd
ENSMAMG00000002063	utp20	99	55.341	ENSCGRG00000008595	Utp20	100	54.902	Cricetulus_griseus_crigri
ENSMAMG00000002063	utp20	98	76.069	ENSCSEG00000014760	utp20	99	75.950	Cynoglossus_semilaevis
ENSMAMG00000002063	utp20	99	76.182	ENSCVAG00000001727	utp20	100	76.100	Cyprinodon_variegatus
ENSMAMG00000002063	utp20	99	66.785	ENSDARG00000099280	utp20	99	66.869	Danio_rerio
ENSMAMG00000002063	utp20	99	56.203	ENSDNOG00000016845	UTP20	100	56.028	Dasypus_novemcinctus
ENSMAMG00000002063	utp20	99	55.167	ENSDORG00000014762	Utp20	99	55.463	Dipodomys_ordii
ENSMAMG00000002063	utp20	88	74.638	ENSETEG00000019983	UTP20	89	74.638	Echinops_telfairi
ENSMAMG00000002063	utp20	99	55.662	ENSEASG00005019981	UTP20	100	55.169	Equus_asinus_asinus
ENSMAMG00000002063	utp20	99	55.737	ENSECAG00000006876	UTP20	100	55.322	Equus_caballus
ENSMAMG00000002063	utp20	72	64.286	ENSEEUG00000003774	UTP20	75	61.765	Erinaceus_europaeus
ENSMAMG00000002063	utp20	100	69.825	ENSELUG00000000798	utp20	100	69.993	Esox_lucius
ENSMAMG00000002063	utp20	99	56.528	ENSFCAG00000006150	UTP20	100	55.722	Felis_catus
ENSMAMG00000002063	utp20	94	56.182	ENSFALG00000011135	UTP20	100	55.652	Ficedula_albicollis
ENSMAMG00000002063	utp20	93	52.585	ENSFDAG00000007567	UTP20	94	69.421	Fukomys_damarensis
ENSMAMG00000002063	utp20	97	78.825	ENSFHEG00000004142	utp20	100	78.598	Fundulus_heteroclitus
ENSMAMG00000002063	utp20	99	64.979	ENSGMOG00000006762	utp20	100	65.394	Gadus_morhua
ENSMAMG00000002063	utp20	99	57.037	ENSGALG00000011643	UTP20	100	56.947	Gallus_gallus
ENSMAMG00000002063	utp20	98	75.028	ENSGAFG00000006986	utp20	100	75.347	Gambusia_affinis
ENSMAMG00000002063	utp20	99	76.566	ENSGACG00000019092	utp20	100	76.800	Gasterosteus_aculeatus
ENSMAMG00000002063	utp20	67	60.288	ENSGAGG00000011169	UTP20	97	60.011	Gopherus_agassizii
ENSMAMG00000002063	utp20	99	55.437	ENSGGOG00000004904	UTP20	100	54.886	Gorilla_gorilla
ENSMAMG00000002063	utp20	100	80.179	ENSHBUG00000010613	utp20	100	80.408	Haplochromis_burtoni
ENSMAMG00000002063	utp20	100	55.025	ENSHGLG00000006422	UTP20	100	54.863	Heterocephalus_glaber_female
ENSMAMG00000002063	utp20	100	53.728	ENSHGLG00100001086	UTP20	100	53.566	Heterocephalus_glaber_male
ENSMAMG00000002063	utp20	96	78.249	ENSHCOG00000005421	utp20	98	78.451	Hippocampus_comes
ENSMAMG00000002063	utp20	100	66.785	ENSIPUG00000013717	utp20	100	66.262	Ictalurus_punctatus
ENSMAMG00000002063	utp20	100	56.239	ENSSTOG00000015995	UTP20	100	56.017	Ictidomys_tridecemlineatus
ENSMAMG00000002063	utp20	99	54.549	ENSJJAG00000019321	Utp20	100	54.494	Jaculus_jaculus
ENSMAMG00000002063	utp20	100	75.515	ENSKMAG00000005972	utp20	100	75.587	Kryptolebias_marmoratus
ENSMAMG00000002063	utp20	98	77.778	ENSLBEG00000000781	utp20	100	78.628	Labrus_bergylta
ENSMAMG00000002063	utp20	78	58.510	ENSLACG00000010098	UTP20	99	58.356	Latimeria_chalumnae
ENSMAMG00000002063	utp20	94	61.701	ENSLOCG00000015197	utp20	86	63.328	Lepisosteus_oculatus
ENSMAMG00000002063	utp20	100	55.205	ENSLAFG00000012983	UTP20	100	54.562	Loxodonta_africana
ENSMAMG00000002063	utp20	99	56.154	ENSMFAG00000037766	UTP20	100	55.666	Macaca_fascicularis
ENSMAMG00000002063	utp20	99	56.261	ENSMMUG00000012891	UTP20	100	55.773	Macaca_mulatta
ENSMAMG00000002063	utp20	99	54.552	ENSMNEG00000037418	UTP20	100	54.422	Macaca_nemestrina
ENSMAMG00000002063	utp20	99	54.361	ENSMLEG00000029148	UTP20	100	54.274	Mandrillus_leucophaeus
ENSMAMG00000002063	utp20	100	79.829	ENSMZEG00005018123	utp20	100	79.986	Maylandia_zebra
ENSMAMG00000002063	utp20	99	56.800	ENSMGAG00000011726	UTP20	100	56.411	Meleagris_gallopavo
ENSMAMG00000002063	utp20	64	53.554	ENSMAUG00000011898	Utp20	99	53.330	Mesocricetus_auratus
ENSMAMG00000002063	utp20	99	53.893	ENSMICG00000015736	UTP20	100	53.222	Microcebus_murinus
ENSMAMG00000002063	utp20	99	54.811	ENSMOCG00000015242	Utp20	100	54.093	Microtus_ochrogaster
ENSMAMG00000002063	utp20	99	74.777	ENSMMOG00000003360	utp20	100	74.581	Mola_mola
ENSMAMG00000002063	utp20	99	56.173	ENSMODG00000003141	UTP20	100	56.235	Monodelphis_domestica
ENSMAMG00000002063	utp20	100	82.378	ENSMALG00000002723	utp20	100	82.509	Monopterus_albus
ENSMAMG00000002063	utp20	99	55.334	MGP_CAROLIEiJ_G0015713	Utp20	100	54.739	Mus_caroli
ENSMAMG00000002063	utp20	99	55.599	ENSMUSG00000004356	Utp20	100	55.078	Mus_musculus
ENSMAMG00000002063	utp20	99	55.544	MGP_PahariEiJ_G0031372	Utp20	100	54.952	Mus_pahari
ENSMAMG00000002063	utp20	99	55.536	MGP_SPRETEiJ_G0016531	Utp20	93	73.810	Mus_spretus
ENSMAMG00000002063	utp20	100	56.335	ENSMPUG00000011641	UTP20	100	55.872	Mustela_putorius_furo
ENSMAMG00000002063	utp20	99	55.840	ENSMLUG00000002313	UTP20	100	55.185	Myotis_lucifugus
ENSMAMG00000002063	utp20	99	55.571	ENSNGAG00000013738	Utp20	100	55.302	Nannospalax_galili
ENSMAMG00000002063	utp20	80	88.060	ENSNBRG00000019464	utp20	99	88.060	Neolamprologus_brichardi
ENSMAMG00000002063	utp20	99	56.288	ENSNLEG00000006166	UTP20	100	55.682	Nomascus_leucogenys
ENSMAMG00000002063	utp20	88	81.481	ENSMEUG00000015457	UTP20	87	63.415	Notamacropus_eugenii
ENSMAMG00000002063	utp20	84	77.070	ENSOPRG00000010546	UTP20	85	77.070	Ochotona_princeps
ENSMAMG00000002063	utp20	100	54.911	ENSODEG00000013411	UTP20	100	54.698	Octodon_degus
ENSMAMG00000002063	utp20	100	80.651	ENSONIG00000009910	utp20	100	80.772	Oreochromis_niloticus
ENSMAMG00000002063	utp20	99	56.551	ENSOANG00000005578	UTP20	99	56.308	Ornithorhynchus_anatinus
ENSMAMG00000002063	utp20	99	55.829	ENSOCUG00000010475	UTP20	100	55.792	Oryctolagus_cuniculus
ENSMAMG00000002063	utp20	94	73.996	ENSORLG00000008900	utp20	98	73.784	Oryzias_latipes
ENSMAMG00000002063	utp20	94	73.573	ENSORLG00020005879	utp20	98	73.573	Oryzias_latipes_hni
ENSMAMG00000002063	utp20	98	71.101	ENSORLG00015002843	utp20	99	71.255	Oryzias_latipes_hsok
ENSMAMG00000002063	utp20	98	74.807	ENSOMEG00000023583	utp20	100	75.037	Oryzias_melastigma
ENSMAMG00000002063	utp20	99	55.473	ENSOGAG00000015130	UTP20	100	54.917	Otolemur_garnettii
ENSMAMG00000002063	utp20	99	56.730	ENSOARG00000014722	UTP20	100	56.266	Ovis_aries
ENSMAMG00000002063	utp20	99	55.967	ENSPPAG00000001381	UTP20	100	55.484	Pan_paniscus
ENSMAMG00000002063	utp20	99	56.401	ENSPPRG00000001026	UTP20	100	55.651	Panthera_pardus
ENSMAMG00000002063	utp20	99	56.350	ENSPTIG00000020972	UTP20	100	55.579	Panthera_tigris_altaica
ENSMAMG00000002063	utp20	99	56.038	ENSPTRG00000005349	UTP20	100	55.556	Pan_troglodytes
ENSMAMG00000002063	utp20	99	56.074	ENSPANG00000020388	UTP20	100	55.595	Papio_anubis
ENSMAMG00000002063	utp20	100	64.679	ENSPKIG00000007196	utp20	100	64.489	Paramormyrops_kingsleyae
ENSMAMG00000002063	utp20	94	56.805	ENSPSIG00000016689	UTP20	100	56.718	Pelodiscus_sinensis
ENSMAMG00000002063	utp20	100	74.401	ENSPMGG00000004066	utp20	100	74.607	Periophthalmus_magnuspinnatus
ENSMAMG00000002063	utp20	99	55.492	ENSPEMG00000024120	Utp20	100	55.155	Peromyscus_maniculatus_bairdii
ENSMAMG00000002063	utp20	98	58.140	ENSPCIG00000009298	UTP20	99	58.140	Phascolarctos_cinereus
ENSMAMG00000002063	utp20	92	76.837	ENSPFOG00000003312	utp20	100	77.190	Poecilia_formosa
ENSMAMG00000002063	utp20	98	75.356	ENSPLAG00000012874	utp20	100	75.916	Poecilia_latipinna
ENSMAMG00000002063	utp20	98	75.489	ENSPMEG00000005915	utp20	100	75.600	Poecilia_mexicana
ENSMAMG00000002063	utp20	98	75.238	ENSPREG00000013285	utp20	100	75.449	Poecilia_reticulata
ENSMAMG00000002063	utp20	88	55.704	ENSPPYG00000004871	UTP20	99	55.479	Pongo_abelii
ENSMAMG00000002063	utp20	81	70.707	ENSPCAG00000012791	UTP20	82	70.707	Procavia_capensis
ENSMAMG00000002063	utp20	96	56.263	ENSPCOG00000024948	UTP20	100	55.419	Propithecus_coquereli
ENSMAMG00000002063	utp20	99	55.176	ENSPVAG00000008113	UTP20	100	54.468	Pteropus_vampyrus
ENSMAMG00000002063	utp20	100	80.100	ENSPNYG00000011561	utp20	100	80.228	Pundamilia_nyererei
ENSMAMG00000002063	utp20	100	66.915	ENSPNAG00000006176	utp20	100	66.714	Pygocentrus_nattereri
ENSMAMG00000002063	utp20	99	55.445	ENSRNOG00000005823	Utp20	100	54.810	Rattus_norvegicus
ENSMAMG00000002063	utp20	99	54.943	ENSRBIG00000025384	UTP20	100	54.571	Rhinopithecus_bieti
ENSMAMG00000002063	utp20	99	56.323	ENSRROG00000041254	UTP20	100	55.773	Rhinopithecus_roxellana
ENSMAMG00000002063	utp20	99	55.932	ENSSBOG00000035762	UTP20	100	55.365	Saimiri_boliviensis_boliviensis
ENSMAMG00000002063	utp20	98	54.490	ENSSHAG00000002298	UTP20	99	54.542	Sarcophilus_harrisii
ENSMAMG00000002063	utp20	99	67.250	ENSSFOG00015001674	utp20	100	67.143	Scleropages_formosus
ENSMAMG00000002063	utp20	98	78.996	ENSSMAG00000016460	utp20	100	79.032	Scophthalmus_maximus
ENSMAMG00000002063	utp20	100	85.144	ENSSDUG00000013730	utp20	100	85.221	Seriola_dumerili
ENSMAMG00000002063	utp20	100	84.017	ENSSLDG00000012844	utp20	100	84.058	Seriola_lalandi_dorsalis
ENSMAMG00000002063	utp20	59	85.185	ENSSARG00000002796	-	57	72.222	Sorex_araneus
ENSMAMG00000002063	utp20	99	56.050	ENSSPUG00000004513	UTP20	99	55.400	Sphenodon_punctatus
ENSMAMG00000002063	utp20	100	79.814	ENSSPAG00000014674	utp20	100	79.714	Stegastes_partitus
ENSMAMG00000002063	utp20	99	56.172	ENSSSCG00000000869	UTP20	100	55.532	Sus_scrofa
ENSMAMG00000002063	utp20	76	56.227	ENSTGUG00000009053	-	100	56.415	Taeniopygia_guttata
ENSMAMG00000002063	utp20	99	78.217	ENSTRUG00000005849	utp20	99	78.495	Takifugu_rubripes
ENSMAMG00000002063	utp20	99	75.336	ENSTNIG00000006921	utp20	100	75.371	Tetraodon_nigroviridis
ENSMAMG00000002063	utp20	91	53.592	ENSTBEG00000011917	UTP20	91	51.412	Tupaia_belangeri
ENSMAMG00000002063	utp20	97	55.687	ENSTTRG00000017195	UTP20	98	55.359	Tursiops_truncatus
ENSMAMG00000002063	utp20	99	55.943	ENSUAMG00000016363	UTP20	100	55.421	Ursus_americanus
ENSMAMG00000002063	utp20	99	55.409	ENSUMAG00000000077	UTP20	100	54.888	Ursus_maritimus
ENSMAMG00000002063	utp20	88	58.147	ENSVPAG00000011620	UTP20	91	58.078	Vicugna_pacos
ENSMAMG00000002063	utp20	99	55.805	ENSVVUG00000018110	UTP20	99	56.998	Vulpes_vulpes
ENSMAMG00000002063	utp20	98	55.652	ENSXETG00000032346	UTP20	99	55.981	Xenopus_tropicalis
ENSMAMG00000002063	utp20	98	74.533	ENSXMAG00000006503	utp20	100	74.606	Xiphophorus_maculatus