EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000002086 (Gene tree)
Gene ID: 113139793
Gene Symbol: ncl
Alias: fa12d03|wu:fa12d03|zgc:152810
Full Name: nucleolin
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 9498 bases
Position: chrOOHQ01000042.1:4406646-4416143
Accession: ZDB-GENE-030131-6986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000003000	RRM_1	PF00076.22	1.2e-59	1	4
ENSMAMP00000003000	RRM_1	PF00076.22	1.2e-59	2	4
ENSMAMP00000003000	RRM_1	PF00076.22	1.2e-59	3	4
ENSMAMP00000003000	RRM_1	PF00076.22	1.2e-59	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000003061	-	4781	-	ENSMAMP00000003000	822 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000002086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000002086's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000002086	ncl	53	42.572	ENSMAMG00000003479	-	69	43.603

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000002086	ncl	61	39.468	ENSAPOG00000014534	-	66	42.308	Acanthochromis_polyacanthus
ENSMAMG00000002086	ncl	51	90.024	ENSAPOG00000023888	ncl	89	81.604	Acanthochromis_polyacanthus
ENSMAMG00000002086	ncl	62	36.106	ENSAOCG00000014792	-	60	41.710	Amphiprion_ocellaris
ENSMAMG00000002086	ncl	51	90.284	ENSAOCG00000003133	ncl	89	79.843	Amphiprion_ocellaris
ENSMAMG00000002086	ncl	51	90.499	ENSAPEG00000002769	ncl	89	82.334	Amphiprion_percula
ENSMAMG00000002086	ncl	62	36.106	ENSAPEG00000013612	-	60	41.710	Amphiprion_percula
ENSMAMG00000002086	ncl	52	45.676	ENSATEG00000019862	-	79	46.494	Anabas_testudineus
ENSMAMG00000002086	ncl	56	88.769	ENSATEG00000013343	ncl	89	83.968	Anabas_testudineus
ENSMAMG00000002086	ncl	62	53.697	ENSACAG00000001006	-	52	62.992	Anolis_carolinensis
ENSMAMG00000002086	ncl	51	73.821	ENSDARG00000002710	ncl	83	76.547	Danio_rerio
ENSMAMG00000002086	ncl	60	46.384	ENSDNOG00000040257	-	64	47.804	Dasypus_novemcinctus
ENSMAMG00000002086	ncl	62	39.544	ENSDNOG00000031611	-	66	46.649	Dasypus_novemcinctus
ENSMAMG00000002086	ncl	51	50.119	ENSELUG00000022826	-	80	52.291	Esox_lucius
ENSMAMG00000002086	ncl	60	71.315	ENSELUG00000006033	ncl	69	71.183	Esox_lucius
ENSMAMG00000002086	ncl	76	69.953	ENSGACG00000008970	ncl	99	66.297	Gasterosteus_aculeatus
ENSMAMG00000002086	ncl	77	47.590	ENSGAGG00000013330	-	55	62.599	Gopherus_agassizii
ENSMAMG00000002086	ncl	56	80.128	ENSHCOG00000010234	ncl	92	67.625	Hippocampus_comes
ENSMAMG00000002086	ncl	51	81.710	ENSKMAG00000008111	ncl	90	70.233	Kryptolebias_marmoratus
ENSMAMG00000002086	ncl	50	51.435	ENSLACG00000022167	-	79	53.743	Latimeria_chalumnae
ENSMAMG00000002086	ncl	51	64.019	ENSLACG00000009328	ncl	56	66.133	Latimeria_chalumnae
ENSMAMG00000002086	ncl	56	62.687	ENSLOCG00000004828	ncl	63	65.021	Lepisosteus_oculatus
ENSMAMG00000002086	ncl	78	74.919	ENSMALG00000014827	ncl	97	77.958	Monopterus_albus
ENSMAMG00000002086	ncl	50	39.005	ENSORLG00000004645	-	82	40.157	Oryzias_latipes
ENSMAMG00000002086	ncl	55	77.974	ENSORLG00000007055	ncl	88	78.355	Oryzias_latipes
ENSMAMG00000002086	ncl	55	78.194	ENSORLG00020017943	ncl	77	78.355	Oryzias_latipes_hni
ENSMAMG00000002086	ncl	52	79.108	ENSORLG00015013815	ncl	89	84.211	Oryzias_latipes_hsok
ENSMAMG00000002086	ncl	51	83.610	ENSOMEG00000020786	ncl	77	82.289	Oryzias_melastigma
ENSMAMG00000002086	ncl	57	77.156	ENSPKIG00000002604	ncl	65	73.922	Paramormyrops_kingsleyae
ENSMAMG00000002086	ncl	56	81.385	ENSPFOG00000024205	ncl	86	81.304	Poecilia_formosa
ENSMAMG00000002086	ncl	56	80.519	ENSPLAG00000024026	ncl	86	80.435	Poecilia_latipinna
ENSMAMG00000002086	ncl	56	80.519	ENSPMEG00000006000	ncl	86	80.435	Poecilia_mexicana
ENSMAMG00000002086	ncl	51	70.853	ENSPNAG00000006192	ncl	62	67.316	Pygocentrus_nattereri
ENSMAMG00000002086	ncl	50	52.392	ENSSHAG00000002702	-	58	54.762	Sarcophilus_harrisii
ENSMAMG00000002086	ncl	55	72.907	ENSSFOG00015008583	ncl	73	74.678	Scleropages_formosus
ENSMAMG00000002086	ncl	51	86.085	ENSSMAG00000021241	ncl	66	84.199	Scophthalmus_maximus
ENSMAMG00000002086	ncl	54	40.693	ENSSDUG00000010922	-	70	44.648	Seriola_dumerili
ENSMAMG00000002086	ncl	59	83.162	ENSSDUG00000006128	ncl	85	91.421	Seriola_dumerili
ENSMAMG00000002086	ncl	56	86.609	ENSSLDG00000002012	ncl	88	80.317	Seriola_lalandi_dorsalis
ENSMAMG00000002086	ncl	56	52.510	ENSSPUG00000008244	-	59	60.513	Sphenodon_punctatus
ENSMAMG00000002086	ncl	51	42.389	ENSSPAG00000001859	-	61	43.979	Stegastes_partitus
ENSMAMG00000002086	ncl	51	79.433	ENSTRUG00000008185	ncl	69	74.947	Takifugu_rubripes
ENSMAMG00000002086	ncl	54	79.750	ENSTNIG00000012186	ncl	75	73.448	Tetraodon_nigroviridis