EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000002149 (Gene tree)
Gene ID: 113144119
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 6406 bases
Position: chrOOHQ01000077.1:11941776-11948181
Accession: 113144119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000003124	Clp1	PF06807.14	9.2e-29	1	1
ENSMAMP00000003136	Clp1	PF06807.14	9.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000003205	-	1522	-	ENSMAMP00000003136	441 (aa)	XP_026185645	UPI000E46623F
ENSMAMT00000003192	-	5781	-	ENSMAMP00000003124	441 (aa)	XP_026185645	UPI000E46623F

Gene Model

Click here to download ENSMAMG00000002149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000002149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000002149	clp1	99	75.862	ENSG00000172409	CLP1	100	75.982	Homo_sapiens
ENSMAMG00000002149	clp1	100	96.599	ENSAPOG00000008242	clp1	100	96.599	Acanthochromis_polyacanthus
ENSMAMG00000002149	clp1	99	75.632	ENSAMEG00000014551	CLP1	99	75.632	Ailuropoda_melanoleuca
ENSMAMG00000002149	clp1	100	96.599	ENSACIG00000006310	clp1	99	96.599	Amphilophus_citrinellus
ENSMAMG00000002149	clp1	100	97.052	ENSAOCG00000010681	clp1	100	97.052	Amphiprion_ocellaris
ENSMAMG00000002149	clp1	100	97.052	ENSAPEG00000012165	clp1	100	97.052	Amphiprion_percula
ENSMAMG00000002149	clp1	100	97.279	ENSATEG00000012374	clp1	100	97.279	Anabas_testudineus
ENSMAMG00000002149	clp1	98	75.520	ENSACAG00000007139	CLP1	100	75.520	Anolis_carolinensis
ENSMAMG00000002149	clp1	99	75.862	ENSANAG00000034935	CLP1	100	75.982	Aotus_nancymaae
ENSMAMG00000002149	clp1	100	96.372	ENSACLG00000013573	clp1	100	96.372	Astatotilapia_calliptera
ENSMAMG00000002149	clp1	95	88.443	ENSAMXG00000014194	clp1	98	88.443	Astyanax_mexicanus
ENSMAMG00000002149	clp1	98	75.520	ENSBTAG00000006493	CLP1	100	75.520	Bos_taurus
ENSMAMG00000002149	clp1	95	47.281	WBGene00010304	clpf-1	97	47.281	Caenorhabditis_elegans
ENSMAMG00000002149	clp1	99	75.862	ENSCJAG00000008748	CLP1	100	75.982	Callithrix_jacchus
ENSMAMG00000002149	clp1	98	75.520	ENSCAFG00000007815	CLP1	100	75.520	Canis_familiaris
ENSMAMG00000002149	clp1	98	75.520	ENSCAFG00020000903	CLP1	100	75.520	Canis_lupus_dingo
ENSMAMG00000002149	clp1	98	75.751	ENSCHIG00000023497	CLP1	100	75.751	Capra_hircus
ENSMAMG00000002149	clp1	99	75.862	ENSTSYG00000006824	CLP1	99	75.862	Carlito_syrichta
ENSMAMG00000002149	clp1	99	75.402	ENSCAPG00000009703	CLP1	99	75.402	Cavia_aperea
ENSMAMG00000002149	clp1	96	76.887	ENSCPOG00000012554	CLP1	99	76.887	Cavia_porcellus
ENSMAMG00000002149	clp1	98	75.520	ENSCCAG00000031957	CLP1	100	75.520	Cebus_capucinus
ENSMAMG00000002149	clp1	100	74.830	ENSCATG00000044628	CLP1	100	75.982	Cercocebus_atys
ENSMAMG00000002149	clp1	98	75.751	ENSCLAG00000004094	CLP1	100	75.751	Chinchilla_lanigera
ENSMAMG00000002149	clp1	98	75.982	ENSCSAG00000005994	CLP1	100	75.982	Chlorocebus_sabaeus
ENSMAMG00000002149	clp1	98	75.058	ENSCPBG00000016843	CLP1	100	75.058	Chrysemys_picta_bellii
ENSMAMG00000002149	clp1	96	61.939	ENSCING00000003779	-	97	61.939	Ciona_intestinalis
ENSMAMG00000002149	clp1	95	62.201	ENSCSAVG00000003437	-	96	62.201	Ciona_savignyi
ENSMAMG00000002149	clp1	99	75.862	ENSCANG00000034335	CLP1	100	75.982	Colobus_angolensis_palliatus
ENSMAMG00000002149	clp1	98	75.289	ENSCGRG00001002227	CLP1	100	75.289	Cricetulus_griseus_chok1gshd
ENSMAMG00000002149	clp1	98	75.289	ENSCGRG00000004328	CLP1	100	75.289	Cricetulus_griseus_crigri
ENSMAMG00000002149	clp1	100	92.517	ENSCSEG00000008614	clp1	100	92.517	Cynoglossus_semilaevis
ENSMAMG00000002149	clp1	100	95.238	ENSCVAG00000020101	clp1	100	95.238	Cyprinodon_variegatus
ENSMAMG00000002149	clp1	99	85.488	ENSDARG00000063663	clp1	100	84.978	Danio_rerio
ENSMAMG00000002149	clp1	98	75.520	ENSDNOG00000042415	CLP1	90	75.520	Dasypus_novemcinctus
ENSMAMG00000002149	clp1	98	75.289	ENSDORG00000014685	Clp1	100	75.289	Dipodomys_ordii
ENSMAMG00000002149	clp1	95	54.545	FBgn0033842	cbc	97	54.545	Drosophila_melanogaster
ENSMAMG00000002149	clp1	98	75.751	ENSETEG00000003009	CLP1	100	75.751	Echinops_telfairi
ENSMAMG00000002149	clp1	98	64.965	ENSEBUG00000011648	clp1	99	64.965	Eptatretus_burgeri
ENSMAMG00000002149	clp1	98	75.982	ENSEASG00005002093	CLP1	100	75.982	Equus_asinus_asinus
ENSMAMG00000002149	clp1	99	75.917	ENSECAG00000011597	CLP1	100	75.982	Equus_caballus
ENSMAMG00000002149	clp1	98	75.058	ENSEEUG00000012771	CLP1	100	75.058	Erinaceus_europaeus
ENSMAMG00000002149	clp1	100	86.547	ENSELUG00000024048	clp1	100	86.771	Esox_lucius
ENSMAMG00000002149	clp1	99	75.632	ENSFCAG00000006633	CLP1	100	75.520	Felis_catus
ENSMAMG00000002149	clp1	98	75.520	ENSFALG00000011145	CLP1	100	75.520	Ficedula_albicollis
ENSMAMG00000002149	clp1	98	75.751	ENSFDAG00000000234	CLP1	100	75.751	Fukomys_damarensis
ENSMAMG00000002149	clp1	100	95.238	ENSFHEG00000014760	CLP1	100	95.238	Fundulus_heteroclitus
ENSMAMG00000002149	clp1	100	89.796	ENSGMOG00000019340	clp1	100	89.796	Gadus_morhua
ENSMAMG00000002149	clp1	98	75.751	ENSGALG00000007370	CLP1	100	75.751	Gallus_gallus
ENSMAMG00000002149	clp1	100	95.465	ENSGAFG00000003020	clp1	100	95.465	Gambusia_affinis
ENSMAMG00000002149	clp1	100	95.465	ENSGACG00000017832	clp1	100	95.465	Gasterosteus_aculeatus
ENSMAMG00000002149	clp1	98	75.058	ENSGAGG00000013279	CLP1	100	75.058	Gopherus_agassizii
ENSMAMG00000002149	clp1	99	75.862	ENSGGOG00000023006	CLP1	100	75.982	Gorilla_gorilla
ENSMAMG00000002149	clp1	100	96.599	ENSHBUG00000010436	clp1	100	96.599	Haplochromis_burtoni
ENSMAMG00000002149	clp1	98	75.751	ENSHGLG00000009914	CLP1	100	75.751	Heterocephalus_glaber_female
ENSMAMG00000002149	clp1	98	75.751	ENSHGLG00100006105	CLP1	100	75.751	Heterocephalus_glaber_male
ENSMAMG00000002149	clp1	100	95.465	ENSHCOG00000010072	clp1	100	95.465	Hippocampus_comes
ENSMAMG00000002149	clp1	100	84.633	ENSIPUG00000016238	clp1	99	84.633	Ictalurus_punctatus
ENSMAMG00000002149	clp1	98	75.751	ENSSTOG00000029257	CLP1	100	75.751	Ictidomys_tridecemlineatus
ENSMAMG00000002149	clp1	98	75.289	ENSJJAG00000023691	Clp1	100	75.289	Jaculus_jaculus
ENSMAMG00000002149	clp1	100	95.011	ENSKMAG00000011990	clp1	100	95.011	Kryptolebias_marmoratus
ENSMAMG00000002149	clp1	100	96.825	ENSLBEG00000010201	clp1	100	96.825	Labrus_bergylta
ENSMAMG00000002149	clp1	97	75.117	ENSLACG00000003160	CLP1	99	75.117	Latimeria_chalumnae
ENSMAMG00000002149	clp1	71	86.957	ENSLOCG00000008074	clp1	100	86.957	Lepisosteus_oculatus
ENSMAMG00000002149	clp1	98	75.520	ENSLAFG00000014907	CLP1	100	75.520	Loxodonta_africana
ENSMAMG00000002149	clp1	99	75.862	ENSMFAG00000046074	CLP1	100	75.982	Macaca_fascicularis
ENSMAMG00000002149	clp1	99	75.862	ENSMMUG00000038007	CLP1	99	75.862	Macaca_mulatta
ENSMAMG00000002149	clp1	98	75.982	ENSMNEG00000000259	CLP1	100	75.982	Macaca_nemestrina
ENSMAMG00000002149	clp1	99	75.862	ENSMLEG00000043556	CLP1	100	75.982	Mandrillus_leucophaeus
ENSMAMG00000002149	clp1	100	96.372	ENSMZEG00005002850	clp1	100	96.372	Maylandia_zebra
ENSMAMG00000002149	clp1	98	75.751	ENSMGAG00000009643	CLP1	100	75.751	Meleagris_gallopavo
ENSMAMG00000002149	clp1	98	74.827	ENSMAUG00000016261	Clp1	100	74.827	Mesocricetus_auratus
ENSMAMG00000002149	clp1	99	75.171	ENSMICG00000004895	CLP1	100	75.520	Microcebus_murinus
ENSMAMG00000002149	clp1	98	75.520	ENSMOCG00000005498	Clp1	100	75.520	Microtus_ochrogaster
ENSMAMG00000002149	clp1	100	94.785	ENSMMOG00000003229	clp1	100	94.785	Mola_mola
ENSMAMG00000002149	clp1	98	75.520	ENSMODG00000020107	-	100	75.520	Monodelphis_domestica
ENSMAMG00000002149	clp1	98	75.520	ENSMODG00000024148	-	100	75.520	Monodelphis_domestica
ENSMAMG00000002149	clp1	100	96.825	ENSMALG00000014239	clp1	100	96.825	Monopterus_albus
ENSMAMG00000002149	clp1	98	75.289	MGP_CAROLIEiJ_G0023726	Clp1	100	75.289	Mus_caroli
ENSMAMG00000002149	clp1	98	75.289	ENSMUSG00000027079	Clp1	100	75.289	Mus_musculus
ENSMAMG00000002149	clp1	98	75.058	MGP_PahariEiJ_G0025177	Clp1	100	75.058	Mus_pahari
ENSMAMG00000002149	clp1	98	75.289	MGP_SPRETEiJ_G0024646	Clp1	100	75.289	Mus_spretus
ENSMAMG00000002149	clp1	98	75.520	ENSMPUG00000000268	CLP1	100	75.520	Mustela_putorius_furo
ENSMAMG00000002149	clp1	98	75.751	ENSMLUG00000007904	CLP1	100	75.751	Myotis_lucifugus
ENSMAMG00000002149	clp1	98	75.289	ENSNGAG00000006165	Clp1	100	75.289	Nannospalax_galili
ENSMAMG00000002149	clp1	100	96.372	ENSNBRG00000005225	clp1	100	96.372	Neolamprologus_brichardi
ENSMAMG00000002149	clp1	80	70.312	ENSNLEG00000012809	-	100	70.312	Nomascus_leucogenys
ENSMAMG00000002149	clp1	98	75.576	ENSMEUG00000010949	CLP1	100	75.576	Notamacropus_eugenii
ENSMAMG00000002149	clp1	69	78.218	ENSOPRG00000007329	CLP1	100	78.218	Ochotona_princeps
ENSMAMG00000002149	clp1	98	75.751	ENSODEG00000011410	CLP1	100	75.751	Octodon_degus
ENSMAMG00000002149	clp1	100	96.372	ENSONIG00000005089	clp1	100	96.372	Oreochromis_niloticus
ENSMAMG00000002149	clp1	98	75.520	ENSOCUG00000007045	CLP1	100	75.520	Oryctolagus_cuniculus
ENSMAMG00000002149	clp1	100	93.878	ENSORLG00000003647	clp1	100	93.878	Oryzias_latipes
ENSMAMG00000002149	clp1	100	93.651	ENSORLG00020016676	clp1	100	93.651	Oryzias_latipes_hni
ENSMAMG00000002149	clp1	100	93.878	ENSORLG00015019484	clp1	100	93.878	Oryzias_latipes_hsok
ENSMAMG00000002149	clp1	100	94.331	ENSOMEG00000021303	clp1	100	94.331	Oryzias_melastigma
ENSMAMG00000002149	clp1	98	75.520	ENSOGAG00000004508	CLP1	100	75.520	Otolemur_garnettii
ENSMAMG00000002149	clp1	98	74.885	ENSOARG00000010145	CLP1	99	74.885	Ovis_aries
ENSMAMG00000002149	clp1	99	75.862	ENSPPAG00000041519	CLP1	100	75.982	Pan_paniscus
ENSMAMG00000002149	clp1	98	75.520	ENSPPRG00000006135	CLP1	100	75.520	Panthera_pardus
ENSMAMG00000002149	clp1	98	75.520	ENSPTIG00000015866	CLP1	100	75.520	Panthera_tigris_altaica
ENSMAMG00000002149	clp1	98	75.982	ENSPTRG00000047318	CLP1	100	75.982	Pan_troglodytes
ENSMAMG00000002149	clp1	99	75.862	ENSPANG00000017078	CLP1	98	75.862	Papio_anubis
ENSMAMG00000002149	clp1	100	86.517	ENSPKIG00000007697	clp1	100	86.517	Paramormyrops_kingsleyae
ENSMAMG00000002149	clp1	93	72.439	ENSPSIG00000005468	CLP1	100	72.439	Pelodiscus_sinensis
ENSMAMG00000002149	clp1	100	93.424	ENSPMGG00000012171	clp1	100	93.424	Periophthalmus_magnuspinnatus
ENSMAMG00000002149	clp1	98	75.520	ENSPEMG00000011213	-	100	75.520	Peromyscus_maniculatus_bairdii
ENSMAMG00000002149	clp1	95	68.171	ENSPMAG00000006707	clp1	97	68.171	Petromyzon_marinus
ENSMAMG00000002149	clp1	98	75.751	ENSPCIG00000011899	CLP1	99	75.751	Phascolarctos_cinereus
ENSMAMG00000002149	clp1	100	95.918	ENSPFOG00000008169	clp1	100	95.918	Poecilia_formosa
ENSMAMG00000002149	clp1	100	95.918	ENSPLAG00000022388	clp1	100	95.918	Poecilia_latipinna
ENSMAMG00000002149	clp1	100	95.918	ENSPMEG00000021088	clp1	100	95.918	Poecilia_mexicana
ENSMAMG00000002149	clp1	100	95.918	ENSPREG00000017802	clp1	100	95.918	Poecilia_reticulata
ENSMAMG00000002149	clp1	52	75.109	ENSPPYG00000003266	-	100	75.109	Pongo_abelii
ENSMAMG00000002149	clp1	99	75.632	ENSPCOG00000000360	CLP1	99	75.632	Propithecus_coquereli
ENSMAMG00000002149	clp1	98	75.520	ENSPVAG00000016270	CLP1	100	75.520	Pteropus_vampyrus
ENSMAMG00000002149	clp1	100	96.599	ENSPNYG00000017274	clp1	99	96.599	Pundamilia_nyererei
ENSMAMG00000002149	clp1	100	85.938	ENSPNAG00000026460	clp1	100	86.607	Pygocentrus_nattereri
ENSMAMG00000002149	clp1	98	75.289	ENSRNOG00000007416	Clp1	100	75.289	Rattus_norvegicus
ENSMAMG00000002149	clp1	98	75.982	ENSRBIG00000018191	CLP1	100	75.982	Rhinopithecus_bieti
ENSMAMG00000002149	clp1	99	75.862	ENSRROG00000039265	CLP1	100	75.982	Rhinopithecus_roxellana
ENSMAMG00000002149	clp1	94	62.560	ENSSBOG00000010558	-	93	62.560	Saimiri_boliviensis_boliviensis
ENSMAMG00000002149	clp1	98	75.982	ENSSBOG00000032517	-	100	75.982	Saimiri_boliviensis_boliviensis
ENSMAMG00000002149	clp1	98	75.751	ENSSHAG00000015695	CLP1	100	75.751	Sarcophilus_harrisii
ENSMAMG00000002149	clp1	100	84.989	ENSSFOG00015000628	clp1	100	86.036	Scleropages_formosus
ENSMAMG00000002149	clp1	100	96.599	ENSSMAG00000019423	clp1	99	96.599	Scophthalmus_maximus
ENSMAMG00000002149	clp1	100	97.732	ENSSDUG00000014495	clp1	100	97.732	Seriola_dumerili
ENSMAMG00000002149	clp1	100	97.506	ENSSLDG00000000937	clp1	100	97.506	Seriola_lalandi_dorsalis
ENSMAMG00000002149	clp1	52	75.000	ENSSARG00000002459	CLP1	100	75.000	Sorex_araneus
ENSMAMG00000002149	clp1	98	74.827	ENSSPUG00000016811	CLP1	100	74.827	Sphenodon_punctatus
ENSMAMG00000002149	clp1	100	96.825	ENSSPAG00000016052	clp1	100	96.825	Stegastes_partitus
ENSMAMG00000002149	clp1	98	75.520	ENSSSCG00000031442	CLP1	100	75.520	Sus_scrofa
ENSMAMG00000002149	clp1	98	75.289	ENSTGUG00000007002	CLP1	100	75.289	Taeniopygia_guttata
ENSMAMG00000002149	clp1	100	92.063	ENSTRUG00000012602	clp1	100	92.063	Takifugu_rubripes
ENSMAMG00000002149	clp1	100	92.517	ENSTNIG00000013125	clp1	100	92.517	Tetraodon_nigroviridis
ENSMAMG00000002149	clp1	98	75.058	ENSTBEG00000009975	CLP1	100	75.058	Tupaia_belangeri
ENSMAMG00000002149	clp1	98	75.520	ENSTTRG00000002096	CLP1	100	75.520	Tursiops_truncatus
ENSMAMG00000002149	clp1	98	75.520	ENSUAMG00000011388	CLP1	100	75.520	Ursus_americanus
ENSMAMG00000002149	clp1	98	75.520	ENSUMAG00000018317	CLP1	100	75.520	Ursus_maritimus
ENSMAMG00000002149	clp1	100	74.830	ENSVVUG00000017138	CLP1	99	74.830	Vulpes_vulpes
ENSMAMG00000002149	clp1	99	72.273	ENSXETG00000007088	clp1	99	72.500	Xenopus_tropicalis
ENSMAMG00000002149	clp1	100	95.692	ENSXCOG00000002287	clp1	100	95.692	Xiphophorus_couchianus
ENSMAMG00000002149	clp1	100	95.692	ENSXMAG00000009783	clp1	100	95.692	Xiphophorus_maculatus