EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000002176 (Gene tree)
Gene ID
113126053
Gene Symbol
-
Alias
-
Full Name
RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Plus strand
Length
230832 bases
Position
chrOOHQ01000103.1:15299215-15530046
Accession
113126053
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000003222RRM_1PF00076.223.4e-3112
ENSMAMP00000003222RRM_1PF00076.223.4e-3122
ENSMAMP00000003174RRM_1PF00076.223.5e-3112
ENSMAMP00000003174RRM_1PF00076.223.5e-3122
ENSMAMP00000003150RRM_1PF00076.225.6e-3112
ENSMAMP00000003150RRM_1PF00076.225.6e-3122
ENSMAMP00000003193RRM_1PF00076.226.4e-3112
ENSMAMP00000003193RRM_1PF00076.226.4e-3122
ENSMAMP00000003133RRM_1PF00076.226.5e-3112
ENSMAMP00000003133RRM_1PF00076.226.5e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000003264-1917-ENSMAMP00000003193553 (aa)--
ENSMAMT00000003219-1915-ENSMAMP00000003150521 (aa)XP_026155600UPI000E45BF29
ENSMAMT00000003202-1902XM_026299812ENSMAMP00000003133548 (aa)XP_026155597UPI000E464AF0
ENSMAMT00000003293-1347-ENSMAMP00000003222448 (aa)--
ENSMAMT00000003245-1693-ENSMAMP00000003174447 (aa)--
Gene Model
Click here to download ENSMAMG00000002176's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000002176's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000002176-7657.849ENSMAMG00000005018rbms1a8957.353
ENSMAMG00000002176-8385.974ENSMAMG00000024043rbms39086.753
ENSMAMG00000002176-8871.608ENSMAMG00000003821rbms2a9472.111
ENSMAMG00000002176-8168.564ENSMAMG00000003159-9367.460
ENSMAMG00000002176-8367.363ENSMAMG00000007264rbms2b8772.238
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000002176-8885.294ENSG00000144642RBMS310090.152Homo_sapiens
ENSMAMG00000002176-8485.271ENSAPOG00000007266rbms39482.946Acanthochromis_polyacanthus
ENSMAMG00000002176-10099.233ENSAPOG00000003432-10093.499Acanthochromis_polyacanthus
ENSMAMG00000002176-6484.158ENSAMEG00000005947RBMS39984.158Ailuropoda_melanoleuca
ENSMAMG00000002176-8175.137ENSACIG00000021113RBMS39575.410Amphilophus_citrinellus
ENSMAMG00000002176-7297.819ENSACIG00000006987-8897.819Amphilophus_citrinellus
ENSMAMG00000002176-8384.974ENSAOCG00000021274rbms39084.974Amphiprion_ocellaris
ENSMAMG00000002176-10099.233ENSAOCG00000024104-10099.233Amphiprion_ocellaris
ENSMAMG00000002176-8890.561ENSAPEG00000009481-9490.561Amphiprion_percula
ENSMAMG00000002176-7388.415ENSAPEG00000016299rbms38887.725Amphiprion_percula
ENSMAMG00000002176-8385.677ENSATEG00000024295rbms39085.938Anabas_testudineus
ENSMAMG00000002176-10098.977ENSATEG00000008433-9498.980Anabas_testudineus
ENSMAMG00000002176-8785.294ENSAPLG00000012270RBMS39483.415Anas_platyrhynchos
ENSMAMG00000002176-8787.909ENSACAG00000028664RBMS39487.909Anolis_carolinensis
ENSMAMG00000002176-8882.660ENSANAG00000021899RBMS39782.660Aotus_nancymaae
ENSMAMG00000002176-8384.856ENSACLG00000018506rbms39385.246Astatotilapia_calliptera
ENSMAMG00000002176-10098.210ENSACLG00000008976-10091.098Astatotilapia_calliptera
ENSMAMG00000002176-8392.246ENSAMXG00000020388rbms39092.246Astyanax_mexicanus
ENSMAMG00000002176-5886.822ENSAMXG00000043770-10086.822Astyanax_mexicanus
ENSMAMG00000002176-8885.366ENSBTAG00000044062RBMS39785.366Bos_taurus
ENSMAMG00000002176-8882.660ENSCJAG00000004312RBMS39782.660Callithrix_jacchus
ENSMAMG00000002176-8882.075ENSCAFG00000005464RBMS39682.075Canis_familiaris
ENSMAMG00000002176-8882.075ENSCAFG00020024980RBMS39782.075Canis_lupus_dingo
ENSMAMG00000002176-8885.122ENSCHIG00000009144RBMS39785.122Capra_hircus
ENSMAMG00000002176-7185.758ENSTSYG00000002615RBMS39985.758Carlito_syrichta
ENSMAMG00000002176-8183.791ENSCAPG00000017783RBMS39582.842Cavia_aperea
ENSMAMG00000002176-8885.608ENSCPOG00000006457RBMS39685.608Cavia_porcellus
ENSMAMG00000002176-8882.660ENSCCAG00000008671RBMS39782.660Cebus_capucinus
ENSMAMG00000002176-8882.423ENSCATG00000013222RBMS39782.423Cercocebus_atys
ENSMAMG00000002176-8884.804ENSCLAG00000005866RBMS39684.804Chinchilla_lanigera
ENSMAMG00000002176-6087.778ENSCSAG00000009655RBMS39987.778Chlorocebus_sabaeus
ENSMAMG00000002176-7688.000ENSCHOG00000000758RBMS38388.000Choloepus_hoffmanni
ENSMAMG00000002176-8787.909ENSCPBG00000022678RBMS39887.566Chrysemys_picta_bellii
ENSMAMG00000002176-8882.423ENSCANG00000032137RBMS39782.423Colobus_angolensis_palliatus
ENSMAMG00000002176-8388.533ENSCGRG00001007243Rbms39684.910Cricetulus_griseus_chok1gshd
ENSMAMG00000002176-8388.533ENSCGRG00000004599Rbms39684.910Cricetulus_griseus_crigri
ENSMAMG00000002176-10097.442ENSCSEG00000014677-10097.442Cynoglossus_semilaevis
ENSMAMG00000002176-8385.455ENSCSEG00000010011RBMS39880.476Cynoglossus_semilaevis
ENSMAMG00000002176-8798.214ENSCVAG00000022814-10098.433Cyprinodon_variegatus
ENSMAMG00000002176-8386.053ENSCVAG00000022354rbms39086.053Cyprinodon_variegatus
ENSMAMG00000002176-8392.781ENSDARG00000044574rbms39594.161Danio_rerio
ENSMAMG00000002176-8884.804ENSDNOG00000016645RBMS39484.804Dasypus_novemcinctus
ENSMAMG00000002176-8884.352ENSDORG00000007220Rbms39684.352Dipodomys_ordii
ENSMAMG00000002176-6583.333ENSETEG00000009485-8070.286Echinops_telfairi
ENSMAMG00000002176-6253.737ENSEBUG00000005830rbms38655.431Eptatretus_burgeri
ENSMAMG00000002176-8885.049ENSEASG00005006152RBMS39685.049Equus_asinus_asinus
ENSMAMG00000002176-8885.049ENSECAG00000017871RBMS39685.049Equus_caballus
ENSMAMG00000002176-8379.545ENSEEUG00000014337RBMS310079.545Erinaceus_europaeus
ENSMAMG00000002176-8896.697ENSELUG00000006905-9897.531Esox_lucius
ENSMAMG00000002176-8285.676ENSELUG00000002862rbms39483.106Esox_lucius
ENSMAMG00000002176-8884.804ENSFCAG00000002130RBMS39684.804Felis_catus
ENSMAMG00000002176-8788.161ENSFALG00000009165RBMS39488.161Ficedula_albicollis
ENSMAMG00000002176-8884.559ENSFDAG00000008278RBMS39684.559Fukomys_damarensis
ENSMAMG00000002176-8176.567ENSFHEG00000004787RBMS39476.567Fundulus_heteroclitus
ENSMAMG00000002176-8488.665ENSGMOG00000002600-9688.665Gadus_morhua
ENSMAMG00000002176-8788.161ENSGALG00000011439RBMS39488.161Gallus_gallus
ENSMAMG00000002176-10098.469ENSGAFG00000003329-10098.469Gambusia_affinis
ENSMAMG00000002176-8385.827ENSGAFG00000000168rbms39485.519Gambusia_affinis
ENSMAMG00000002176-6087.823ENSGAGG00000004039RBMS39987.823Gopherus_agassizii
ENSMAMG00000002176-8882.660ENSGGOG00000007228RBMS39782.660Gorilla_gorilla
ENSMAMG00000002176-10098.210ENSHBUG00000019785-9598.210Haplochromis_burtoni
ENSMAMG00000002176-5886.245ENSHBUG00000021196rbms39483.271Haplochromis_burtoni
ENSMAMG00000002176-8885.049ENSHGLG00000002170RBMS39685.049Heterocephalus_glaber_female
ENSMAMG00000002176-8885.049ENSHGLG00100014278RBMS39685.049Heterocephalus_glaber_male
ENSMAMG00000002176-8896.692ENSHCOG00000007894-9896.684Hippocampus_comes
ENSMAMG00000002176-8392.513ENSIPUG00000017680rbms39092.513Ictalurus_punctatus
ENSMAMG00000002176-8885.294ENSSTOG00000006324RBMS39685.294Ictidomys_tridecemlineatus
ENSMAMG00000002176-8785.354ENSJJAG00000014708Rbms39681.618Jaculus_jaculus
ENSMAMG00000002176-8384.238ENSKMAG00000020500rbms39084.238Kryptolebias_marmoratus
ENSMAMG00000002176-10098.465ENSKMAG00000012586-10098.465Kryptolebias_marmoratus
ENSMAMG00000002176-10097.442ENSLBEG00000027388-10097.442Labrus_bergylta
ENSMAMG00000002176-5675.758ENSLBEG00000006677rbms39776.245Labrus_bergylta
ENSMAMG00000002176-8392.857ENSLACG00000010581RBMS39092.857Latimeria_chalumnae
ENSMAMG00000002176-6592.042ENSLOCG00000002328rbms39992.042Lepisosteus_oculatus
ENSMAMG00000002176-8881.840ENSLAFG00000000354RBMS39781.840Loxodonta_africana
ENSMAMG00000002176-8885.049ENSMFAG00000033300RBMS39685.049Macaca_fascicularis
ENSMAMG00000002176-8885.049ENSMMUG00000004404RBMS39685.049Macaca_mulatta
ENSMAMG00000002176-8882.423ENSMNEG00000035839RBMS39685.347Macaca_nemestrina
ENSMAMG00000002176-8882.423ENSMLEG00000029464RBMS39782.423Mandrillus_leucophaeus
ENSMAMG00000002176-10098.210ENSMZEG00005026469-10091.098Maylandia_zebra
ENSMAMG00000002176-8384.856ENSMZEG00005006308rbms39085.117Maylandia_zebra
ENSMAMG00000002176-8388.533ENSMAUG00000016436Rbms39684.910Mesocricetus_auratus
ENSMAMG00000002176-8882.423ENSMICG00000049249RBMS39782.423Microcebus_murinus
ENSMAMG00000002176-8388.267ENSMOCG00000006997Rbms39684.655Microtus_ochrogaster
ENSMAMG00000002176-8896.939ENSMMOG00000015071-9496.939Mola_mola
ENSMAMG00000002176-7685.185ENSMMOG00000008471RBMS38988.991Mola_mola
ENSMAMG00000002176-8185.347ENSMODG00000015125RBMS38685.347Monodelphis_domestica
ENSMAMG00000002176-8385.455ENSMALG00000019536RBMS39083.333Monopterus_albus
ENSMAMG00000002176-10098.721ENSMALG00000009155-9797.382Monopterus_albus
ENSMAMG00000002176-8387.467MGP_CAROLIEiJ_G0032783Rbms310090.338Mus_caroli
ENSMAMG00000002176-8884.810ENSMUSG00000039607Rbms310091.787Mus_musculus
ENSMAMG00000002176-8884.810MGP_PahariEiJ_G0015650Rbms310091.787Mus_pahari
ENSMAMG00000002176-8884.810MGP_SPRETEiJ_G0033930Rbms310091.787Mus_spretus
ENSMAMG00000002176-8882.075ENSMPUG00000011956RBMS39782.075Mustela_putorius_furo
ENSMAMG00000002176-8885.294ENSMLUG00000000659RBMS39685.294Myotis_lucifugus
ENSMAMG00000002176-8885.112ENSNGAG00000014039Rbms39685.112Nannospalax_galili
ENSMAMG00000002176-8897.959ENSNBRG00000018065-9497.959Neolamprologus_brichardi
ENSMAMG00000002176-8882.660ENSNLEG00000004129RBMS39782.660Nomascus_leucogenys
ENSMAMG00000002176-8379.597ENSMEUG00000004772RBMS39079.597Notamacropus_eugenii
ENSMAMG00000002176-8386.260ENSOPRG00000006808RBMS37786.260Ochotona_princeps
ENSMAMG00000002176-8885.294ENSODEG00000003651RBMS39685.294Octodon_degus
ENSMAMG00000002176-8184.973ENSONIG00000007172rbms38885.246Oreochromis_niloticus
ENSMAMG00000002176-8387.121ENSOANG00000010529RBMS39087.121Ornithorhynchus_anatinus
ENSMAMG00000002176-8881.368ENSOCUG00000004840RBMS39681.368Oryctolagus_cuniculus
ENSMAMG00000002176-8384.474ENSORLG00000005370RBMS39979.426Oryzias_latipes
ENSMAMG00000002176-9697.867ENSORLG00000002306-10097.867Oryzias_latipes
ENSMAMG00000002176-10098.133ENSORLG00020008496-10098.133Oryzias_latipes_hni
ENSMAMG00000002176-8384.252ENSORLG00020022674RBMS39979.426Oryzias_latipes_hni
ENSMAMG00000002176-8384.514ENSORLG00015005509rbms39979.665Oryzias_latipes_hsok
ENSMAMG00000002176-8898.214ENSORLG00015015719-9498.214Oryzias_latipes_hsok
ENSMAMG00000002176-8385.039ENSOMEG00000014805RBMS39583.602Oryzias_melastigma
ENSMAMG00000002176-10097.954ENSOMEG00000007677-10097.954Oryzias_melastigma
ENSMAMG00000002176-8881.455ENSOARG00000014684RBMS39781.455Ovis_aries
ENSMAMG00000002176-8882.660ENSPPAG00000036519RBMS39782.660Pan_paniscus
ENSMAMG00000002176-8784.841ENSPPRG00000002761RBMS39781.948Panthera_pardus
ENSMAMG00000002176-8787.626ENSPTIG00000011568RBMS39684.559Panthera_tigris_altaica
ENSMAMG00000002176-8885.294ENSPTRG00000014709RBMS39685.294Pan_troglodytes
ENSMAMG00000002176-8882.423ENSPANG00000010234RBMS39782.423Papio_anubis
ENSMAMG00000002176-5893.411ENSPKIG00000007989-10093.411Paramormyrops_kingsleyae
ENSMAMG00000002176-8787.406ENSPSIG00000005269RBMS39487.406Pelodiscus_sinensis
ENSMAMG00000002176-7784.136ENSPMGG00000021544rbms39579.945Periophthalmus_magnuspinnatus
ENSMAMG00000002176-8597.906ENSPMGG00000021683-10097.906Periophthalmus_magnuspinnatus
ENSMAMG00000002176-8385.294ENSPEMG00000001117Rbms38985.294Peromyscus_maniculatus_bairdii
ENSMAMG00000002176-7789.744ENSPCIG00000006106RBMS38989.720Phascolarctos_cinereus
ENSMAMG00000002176-8386.089ENSPFOG00000017887rbms39086.089Poecilia_formosa
ENSMAMG00000002176-7182.555ENSPLAG00000016866-8282.555Poecilia_latipinna
ENSMAMG00000002176-10098.724ENSPMEG00000002993-9498.728Poecilia_mexicana
ENSMAMG00000002176-8285.870ENSPREG00000011880rbms39185.870Poecilia_reticulata
ENSMAMG00000002176-9998.724ENSPREG00000018221-9796.825Poecilia_reticulata
ENSMAMG00000002176-8868.632ENSPPYG00000014050RBMS37968.632Pongo_abelii
ENSMAMG00000002176-8861.792ENSPCAG00000006307RBMS39761.647Procavia_capensis
ENSMAMG00000002176-8882.660ENSPCOG00000017136RBMS39782.660Propithecus_coquereli
ENSMAMG00000002176-7888.000ENSPVAG00000014037RBMS39673.113Pteropus_vampyrus
ENSMAMG00000002176-8898.214ENSPNYG00000012624-10094.235Pundamilia_nyererei
ENSMAMG00000002176-8384.595ENSPNYG00000010546rbms39084.856Pundamilia_nyererei
ENSMAMG00000002176-8392.246ENSPNAG00000001800rbms39092.246Pygocentrus_nattereri
ENSMAMG00000002176-8388.533ENSRNOG00000025881Rbms39784.910Rattus_norvegicus
ENSMAMG00000002176-8882.185ENSRBIG00000035863RBMS39782.185Rhinopithecus_bieti
ENSMAMG00000002176-8187.037ENSRROG00000027512RBMS39485.751Rhinopithecus_roxellana
ENSMAMG00000002176-8882.660ENSSBOG00000020232RBMS39782.660Saimiri_boliviensis_boliviensis
ENSMAMG00000002176-8183.562ENSSHAG00000002411RBMS39383.562Sarcophilus_harrisii
ENSMAMG00000002176-8894.643ENSSFOG00015008578rbms39894.400Scleropages_formosus
ENSMAMG00000002176-8995.729ENSSMAG00000020065-9995.729Scophthalmus_maximus
ENSMAMG00000002176-8183.607ENSSMAG00000004997rbms39983.880Scophthalmus_maximus
ENSMAMG00000002176-10099.233ENSSDUG00000019287-10093.690Seriola_dumerili
ENSMAMG00000002176-8385.455ENSSDUG00000013656RBMS39085.714Seriola_dumerili
ENSMAMG00000002176-8385.052ENSSLDG00000020276RBMS39085.309Seriola_lalandi_dorsalis
ENSMAMG00000002176-10099.233ENSSLDG00000013224-10093.499Seriola_lalandi_dorsalis
ENSMAMG00000002176-7274.780ENSSARG00000000695RBMS39473.639Sorex_araneus
ENSMAMG00000002176-6486.986ENSSPUG00000017197RBMS39785.859Sphenodon_punctatus
ENSMAMG00000002176-10099.233ENSSPAG00000003983-10092.776Stegastes_partitus
ENSMAMG00000002176-8384.974ENSSPAG00000020693rbms39386.982Stegastes_partitus
ENSMAMG00000002176-8885.049ENSSSCG00000036381RBMS39689.737Sus_scrofa
ENSMAMG00000002176-7185.285ENSTGUG00000003572RBMS39985.285Taeniopygia_guttata
ENSMAMG00000002176-8383.896ENSTRUG00000021719RBMS39083.896Takifugu_rubripes
ENSMAMG00000002176-7697.361ENSTRUG00000007482-8993.352Takifugu_rubripes
ENSMAMG00000002176-7288.563ENSTBEG00000005362RBMS39487.106Tupaia_belangeri
ENSMAMG00000002176-8881.604ENSTTRG00000006202RBMS39781.604Tursiops_truncatus
ENSMAMG00000002176-8882.075ENSUMAG00000000263RBMS38890.571Ursus_maritimus
ENSMAMG00000002176-8176.378ENSVPAG00000003842RBMS39475.321Vicugna_pacos
ENSMAMG00000002176-8186.877ENSVVUG00000004660RBMS39492.627Vulpes_vulpes
ENSMAMG00000002176-6581.433ENSXETG00000032055RBMS39881.433Xenopus_tropicalis
ENSMAMG00000002176-8582.776ENSXCOG00000019600-10082.776Xiphophorus_couchianus
ENSMAMG00000002176-10098.724ENSXMAG00000014382-10098.724Xiphophorus_maculatus
ENSMAMG00000002176-8383.770ENSXMAG00000021783rbms39083.770Xiphophorus_maculatus

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