EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000002296 (Gene tree)
Gene ID: 113126174
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 6556 bases
Position: chrOOHQ01000103.1:3740341-3746896
Accession: 113126174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000003334	MMR_HSR1	PF01926.23	8.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000003413	-	5353	XM_026300050	ENSMAMP00000003334	218 (aa)	XP_026155835	UPI000E45BB72

Gene Model

Click here to download ENSMAMG00000002296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000002296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000002296	rab42a	74	34.337	ENSMAMG00000020246	-	79	34.337
ENSMAMG00000002296	rab42a	78	33.529	ENSMAMG00000004106	rras	85	33.529
ENSMAMG00000002296	rab42a	72	40.625	ENSMAMG00000000565	rab33a	68	40.625
ENSMAMG00000002296	rab42a	97	33.649	ENSMAMG00000012233	rab6bb	75	38.217
ENSMAMG00000002296	rab42a	78	42.690	ENSMAMG00000001098	rab33ba	71	42.690
ENSMAMG00000002296	rab42a	74	34.337	ENSMAMG00000023962	RAB7A	79	34.337
ENSMAMG00000002296	rab42a	78	32.948	ENSMAMG00000020214	rab34b	69	32.948
ENSMAMG00000002296	rab42a	96	36.916	ENSMAMG00000002795	rab15	76	42.331
ENSMAMG00000002296	rab42a	98	38.318	ENSMAMG00000012750	rab14	97	38.318
ENSMAMG00000002296	rab42a	76	35.882	ENSMAMG00000006963	RAB29	82	35.882
ENSMAMG00000002296	rab42a	75	36.585	ENSMAMG00000022322	rab5c	74	36.585
ENSMAMG00000002296	rab42a	71	31.410	ENSMAMG00000008168	rabl2	67	31.410
ENSMAMG00000002296	rab42a	100	54.587	ENSMAMG00000011131	-	93	58.291
ENSMAMG00000002296	rab42a	76	38.824	ENSMAMG00000013538	rab9a	83	38.824
ENSMAMG00000002296	rab42a	72	39.490	ENSMAMG00000020859	rab41	74	39.490
ENSMAMG00000002296	rab42a	83	41.667	ENSMAMG00000010297	rab25b	84	41.667
ENSMAMG00000002296	rab42a	79	43.353	ENSMAMG00000020135	zgc:171927	80	43.353
ENSMAMG00000002296	rab42a	85	30.151	ENSMAMG00000010217	rasl11a	75	30.151
ENSMAMG00000002296	rab42a	98	38.318	ENSMAMG00000018450	-	97	38.785
ENSMAMG00000002296	rab42a	84	41.530	ENSMAMG00000006378	rab11bb	83	41.530
ENSMAMG00000002296	rab42a	72	34.810	ENSMAMG00000015456	rab23	74	35.294
ENSMAMG00000002296	rab42a	75	43.636	ENSMAMG00000012471	rab25a	78	43.452
ENSMAMG00000002296	rab42a	78	41.860	ENSMAMG00000006862	rab12	70	41.860
ENSMAMG00000002296	rab42a	87	46.842	ENSMAMG00000011549	rab2a	89	46.842
ENSMAMG00000002296	rab42a	84	41.530	ENSMAMG00000018556	rab11ba	83	41.808
ENSMAMG00000002296	rab42a	60	30.657	ENSMAMG00000015214	rab20	50	30.657
ENSMAMG00000002296	rab42a	78	43.195	ENSMAMG00000014602	rab13	84	43.195
ENSMAMG00000002296	rab42a	69	33.775	ENSMAMG00000004359	hrasb	85	32.927
ENSMAMG00000002296	rab42a	72	43.396	ENSMAMG00000020286	-	76	43.396
ENSMAMG00000002296	rab42a	98	39.070	ENSMAMG00000010278	rab11al	84	42.623
ENSMAMG00000002296	rab42a	77	32.934	ENSMAMG00000001748	rhebl1	88	32.934
ENSMAMG00000002296	rab42a	76	40.000	ENSMAMG00000014320	rab18a	80	40.000
ENSMAMG00000002296	rab42a	90	31.188	ENSMAMG00000018672	rab34a	73	32.308
ENSMAMG00000002296	rab42a	75	35.976	ENSMAMG00000016207	-	74	35.976
ENSMAMG00000002296	rab42a	84	40.984	ENSMAMG00000018533	-	83	40.984
ENSMAMG00000002296	rab42a	71	43.226	ENSMAMG00000006886	RAB15	74	42.767
ENSMAMG00000002296	rab42a	72	39.490	ENSMAMG00000012488	rab6a	75	39.490
ENSMAMG00000002296	rab42a	75	35.366	ENSMAMG00000006024	rab22a	84	35.366
ENSMAMG00000002296	rab42a	76	42.424	ENSMAMG00000018445	rab18b	80	42.424
ENSMAMG00000002296	rab42a	75	31.325	ENSMAMG00000001320	si:cabz01085950.1	69	31.325
ENSMAMG00000002296	rab42a	97	33.175	ENSMAMG00000009672	rab6ba	87	34.973
ENSMAMG00000002296	rab42a	82	42.135	ENSMAMG00000018306	-	87	42.135
ENSMAMG00000002296	rab42a	75	35.366	ENSMAMG00000012573	rab5aa	74	35.802
ENSMAMG00000002296	rab42a	67	41.216	ENSMAMG00000017431	zgc:101559	63	41.216
ENSMAMG00000002296	rab42a	73	45.000	ENSMAMG00000011973	rab30	78	45.000
ENSMAMG00000002296	rab42a	73	32.919	ENSMAMG00000005606	kras	98	31.414
ENSMAMG00000002296	rab42a	80	42.286	ENSMAMG00000019230	si:dkey-16l2.16	82	42.286
ENSMAMG00000002296	rab42a	82	41.011	ENSMAMG00000001408	rab1ba	89	41.011
ENSMAMG00000002296	rab42a	94	35.071	ENSMAMG00000006640	-	62	41.447
ENSMAMG00000002296	rab42a	97	30.698	ENSMAMG00000010136	rab36	58	34.395
ENSMAMG00000002296	rab42a	54	31.624	ENSMAMG00000012997	RAP2B	96	31.538
ENSMAMG00000002296	rab42a	93	38.725	ENSMAMG00000017327	rab11a	84	41.530
ENSMAMG00000002296	rab42a	85	33.333	ENSMAMG00000006281	rheb	94	33.333
ENSMAMG00000002296	rab42a	69	36.842	ENSMAMG00000013700	si:ch73-116o1.2	79	36.145
ENSMAMG00000002296	rab42a	75	38.462	ENSMAMG00000009927	rab9b	82	38.462
ENSMAMG00000002296	rab42a	72	36.478	ENSMAMG00000021095	si:dkey-13a21.4	77	36.478
ENSMAMG00000002296	rab42a	100	54.128	ENSMAMG00000021329	RAB39B	100	54.128

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000002296	rab42a	100	97.706	ENSAPOG00000009188	rab42a	100	97.706	Acanthochromis_polyacanthus
ENSMAMG00000002296	rab42a	100	97.706	ENSACIG00000003102	rab42a	100	97.706	Amphilophus_citrinellus
ENSMAMG00000002296	rab42a	100	97.248	ENSAOCG00000012921	rab42a	83	97.248	Amphiprion_ocellaris
ENSMAMG00000002296	rab42a	100	97.248	ENSAPEG00000007713	rab42a	83	97.248	Amphiprion_percula
ENSMAMG00000002296	rab42a	100	95.413	ENSATEG00000009052	rab42a	100	95.413	Anabas_testudineus
ENSMAMG00000002296	rab42a	100	97.248	ENSACLG00000007514	rab42a	100	97.248	Astatotilapia_calliptera
ENSMAMG00000002296	rab42a	100	91.743	ENSAMXG00000032729	rab42a	100	90.367	Astyanax_mexicanus
ENSMAMG00000002296	rab42a	100	94.954	ENSCSEG00000010582	rab42a	100	94.954	Cynoglossus_semilaevis
ENSMAMG00000002296	rab42a	100	91.284	ENSDARG00000034215	rab42a	100	89.908	Danio_rerio
ENSMAMG00000002296	rab42a	90	49.746	ENSDARG00000102580	CU571310.1	93	49.746	Danio_rerio
ENSMAMG00000002296	rab42a	100	90.367	ENSELUG00000010345	rab42a	100	90.367	Esox_lucius
ENSMAMG00000002296	rab42a	100	96.789	ENSFHEG00000013106	rab42a	100	96.789	Fundulus_heteroclitus
ENSMAMG00000002296	rab42a	100	95.872	ENSGAFG00000002141	rab42a	100	95.872	Gambusia_affinis
ENSMAMG00000002296	rab42a	100	97.248	ENSHBUG00000015126	rab42a	82	97.248	Haplochromis_burtoni
ENSMAMG00000002296	rab42a	100	88.532	ENSIPUG00000011376	rab42a	100	87.156	Ictalurus_punctatus
ENSMAMG00000002296	rab42a	100	95.872	ENSKMAG00000007267	rab42a	100	95.872	Kryptolebias_marmoratus
ENSMAMG00000002296	rab42a	100	97.706	ENSLBEG00000001193	rab42a	100	97.706	Labrus_bergylta
ENSMAMG00000002296	rab42a	100	64.679	ENSLACG00000012755	-	94	68.500	Latimeria_chalumnae
ENSMAMG00000002296	rab42a	100	83.486	ENSLOCG00000003453	rab42a	94	88.000	Lepisosteus_oculatus
ENSMAMG00000002296	rab42a	100	51.598	ENSLOCG00000015825	-	99	51.598	Lepisosteus_oculatus
ENSMAMG00000002296	rab42a	100	97.248	ENSMZEG00005012460	rab42a	82	97.248	Maylandia_zebra
ENSMAMG00000002296	rab42a	100	95.413	ENSMMOG00000014358	rab42a	100	95.413	Mola_mola
ENSMAMG00000002296	rab42a	100	97.706	ENSNBRG00000021487	rab42a	82	97.706	Neolamprologus_brichardi
ENSMAMG00000002296	rab42a	100	97.248	ENSORLG00000022335	rab42a	100	97.248	Oryzias_latipes
ENSMAMG00000002296	rab42a	100	97.248	ENSORLG00020013895	rab42a	100	97.248	Oryzias_latipes_hni
ENSMAMG00000002296	rab42a	100	97.248	ENSORLG00015004273	rab42a	100	97.248	Oryzias_latipes_hsok
ENSMAMG00000002296	rab42a	100	97.248	ENSOMEG00000020418	rab42a	100	97.248	Oryzias_melastigma
ENSMAMG00000002296	rab42a	99	47.005	ENSPKIG00000015234	-	93	50.000	Paramormyrops_kingsleyae
ENSMAMG00000002296	rab42a	100	78.539	ENSPKIG00000021215	-	93	82.412	Paramormyrops_kingsleyae
ENSMAMG00000002296	rab42a	90	97.462	ENSPMGG00000024112	rab42a	90	97.462	Periophthalmus_magnuspinnatus
ENSMAMG00000002296	rab42a	100	94.954	ENSPFOG00000004838	rab42a	82	94.954	Poecilia_formosa
ENSMAMG00000002296	rab42a	100	95.413	ENSPLAG00000005628	rab42a	100	95.413	Poecilia_latipinna
ENSMAMG00000002296	rab42a	100	94.954	ENSPMEG00000019497	rab42a	100	94.954	Poecilia_mexicana
ENSMAMG00000002296	rab42a	100	95.872	ENSPREG00000013962	rab42a	100	95.872	Poecilia_reticulata
ENSMAMG00000002296	rab42a	100	97.248	ENSPNYG00000010325	rab42a	82	97.248	Pundamilia_nyererei
ENSMAMG00000002296	rab42a	100	91.284	ENSPNAG00000016567	rab42a	100	89.908	Pygocentrus_nattereri
ENSMAMG00000002296	rab42a	100	46.575	ENSSFOG00015016000	-	97	46.119	Scleropages_formosus
ENSMAMG00000002296	rab42a	100	85.321	ENSSFOG00015020732	rab42a	100	84.862	Scleropages_formosus
ENSMAMG00000002296	rab42a	100	95.872	ENSSMAG00000020311	rab42a	100	95.872	Scophthalmus_maximus
ENSMAMG00000002296	rab42a	100	98.165	ENSSDUG00000011851	rab42a	100	98.165	Seriola_dumerili
ENSMAMG00000002296	rab42a	100	98.165	ENSSLDG00000020354	rab42a	100	98.165	Seriola_lalandi_dorsalis
ENSMAMG00000002296	rab42a	100	99.083	ENSSPAG00000016167	rab42a	100	99.083	Stegastes_partitus
ENSMAMG00000002296	rab42a	100	97.706	ENSTRUG00000010224	rab42a	100	97.706	Takifugu_rubripes
ENSMAMG00000002296	rab42a	100	96.330	ENSXCOG00000003428	rab42a	100	96.330	Xiphophorus_couchianus
ENSMAMG00000002296	rab42a	100	96.330	ENSXMAG00000028376	rab42a	100	96.330	Xiphophorus_maculatus