EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000002460 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 6258 bases
Position: chrOOHQ01000044.1:1055133-1061390
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000003670	RRM_1	PF00076.22	7.6e-17	1	1
ENSMAMP00000003707	RRM_1	PF00076.22	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000003755	-	1194	-	ENSMAMP00000003670	397 (aa)	-	-
ENSMAMT00000003792	-	1122	-	ENSMAMP00000003707	373 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000002460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000002460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000002460	-	78	89.408	ENSMAMG00000003439	-	90	89.408
ENSMAMG00000002460	-	89	60.822	ENSMAMG00000001145	zgc:123010	87	61.219
ENSMAMG00000002460	-	76	96.333	ENSMAMG00000003394	-	82	96.333
ENSMAMG00000002460	-	68	45.588	ENSMAMG00000000111	si:dkey-33c12.4	51	31.065
ENSMAMG00000002460	-	88	99.429	ENSMAMG00000002377	-	84	99.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000002460	-	86	61.838	ENSAPOG00000019633	zgc:123010	69	61.838	Acanthochromis_polyacanthus
ENSMAMG00000002460	-	73	73.267	ENSAPOG00000001034	-	73	73.267	Acanthochromis_polyacanthus
ENSMAMG00000002460	-	91	57.975	ENSACIG00000021684	zgc:123010	90	61.798	Amphilophus_citrinellus
ENSMAMG00000002460	-	86	61.838	ENSAOCG00000005910	zgc:123010	69	61.838	Amphiprion_ocellaris
ENSMAMG00000002460	-	86	61.838	ENSAPEG00000014305	zgc:123010	73	61.838	Amphiprion_percula
ENSMAMG00000002460	-	85	70.339	ENSATEG00000022160	-	71	70.339	Anabas_testudineus
ENSMAMG00000002460	-	79	36.872	ENSATEG00000018885	si:dkey-33c12.4	50	32.268	Anabas_testudineus
ENSMAMG00000002460	-	86	61.560	ENSATEG00000001220	zgc:123010	69	61.560	Anabas_testudineus
ENSMAMG00000002460	-	53	45.226	ENSAPLG00000013566	-	98	46.040	Anas_platyrhynchos
ENSMAMG00000002460	-	86	60.388	ENSACLG00000010188	zgc:123010	70	60.388	Astatotilapia_calliptera
ENSMAMG00000002460	-	86	70.523	ENSACLG00000012346	-	71	70.799	Astatotilapia_calliptera
ENSMAMG00000002460	-	86	61.127	ENSAMXG00000041967	zgc:123010	67	61.127	Astyanax_mexicanus
ENSMAMG00000002460	-	70	35.110	ENSAMXG00000010871	si:dkey-33c12.4	60	32.383	Astyanax_mexicanus
ENSMAMG00000002460	-	89	39.310	ENSCPBG00000024454	-	59	30.542	Chrysemys_picta_bellii
ENSMAMG00000002460	-	70	42.254	ENSCVAG00000006564	-	51	31.707	Cyprinodon_variegatus
ENSMAMG00000002460	-	86	60.167	ENSCVAG00000013288	zgc:123010	69	60.167	Cyprinodon_variegatus
ENSMAMG00000002460	-	85	58.739	ENSDARG00000039082	zgc:123010	72	58.739	Danio_rerio
ENSMAMG00000002460	-	74	34.402	ENSDARG00000057890	si:dkey-33c12.4	53	34.302	Danio_rerio
ENSMAMG00000002460	-	72	33.117	ENSEBUG00000001368	-	59	34.473	Eptatretus_burgeri
ENSMAMG00000002460	-	86	61.944	ENSELUG00000021447	-	72	61.944	Esox_lucius
ENSMAMG00000002460	-	84	32.439	ENSELUG00000002009	si:dkey-33c12.4	87	34.727	Esox_lucius
ENSMAMG00000002460	-	88	57.103	ENSELUG00000022008	zgc:123010	88	57.103	Esox_lucius
ENSMAMG00000002460	-	55	35.593	ENSFALG00000008867	-	94	34.959	Ficedula_albicollis
ENSMAMG00000002460	-	86	59.384	ENSFHEG00000002306	zgc:123010	69	59.384	Fundulus_heteroclitus
ENSMAMG00000002460	-	64	30.888	ENSGMOG00000001292	-	99	32.114	Gadus_morhua
ENSMAMG00000002460	-	86	57.263	ENSGMOG00000018473	zgc:123010	95	57.263	Gadus_morhua
ENSMAMG00000002460	-	86	58.774	ENSGAFG00000009373	zgc:123010	69	58.774	Gambusia_affinis
ENSMAMG00000002460	-	86	59.331	ENSGACG00000007620	zgc:123010	95	59.053	Gasterosteus_aculeatus
ENSMAMG00000002460	-	70	37.193	ENSGACG00000004936	-	85	37.193	Gasterosteus_aculeatus
ENSMAMG00000002460	-	86	70.523	ENSHBUG00000016720	-	71	70.799	Haplochromis_burtoni
ENSMAMG00000002460	-	85	30.713	ENSIPUG00000005998	si:dkey-33c12.4	64	30.713	Ictalurus_punctatus
ENSMAMG00000002460	-	86	61.838	ENSKMAG00000021350	zgc:123010	69	61.838	Kryptolebias_marmoratus
ENSMAMG00000002460	-	86	70.308	ENSLBEG00000013518	-	71	70.308	Labrus_bergylta
ENSMAMG00000002460	-	86	62.011	ENSLBEG00000023984	zgc:123010	69	62.011	Labrus_bergylta
ENSMAMG00000002460	-	73	38.053	ENSLACG00000004602	-	72	33.415	Latimeria_chalumnae
ENSMAMG00000002460	-	89	53.533	ENSLACG00000009001	zgc:123010	79	54.802	Latimeria_chalumnae
ENSMAMG00000002460	-	86	57.300	ENSLOCG00000008967	zgc:123010	71	58.242	Lepisosteus_oculatus
ENSMAMG00000002460	-	76	35.955	ENSLOCG00000001861	-	63	34.140	Lepisosteus_oculatus
ENSMAMG00000002460	-	56	44.853	ENSMZEG00005000585	-	56	37.089	Maylandia_zebra
ENSMAMG00000002460	-	86	60.388	ENSMZEG00005027733	zgc:123010	70	60.388	Maylandia_zebra
ENSMAMG00000002460	-	86	70.248	ENSMZEG00005014740	-	90	70.523	Maylandia_zebra
ENSMAMG00000002460	-	86	61.696	ENSMMOG00000010544	zgc:123010	74	61.696	Mola_mola
ENSMAMG00000002460	-	86	63.836	ENSMMOG00000017955	-	88	63.587	Mola_mola
ENSMAMG00000002460	-	86	60.724	ENSMALG00000017698	zgc:123010	69	60.724	Monopterus_albus
ENSMAMG00000002460	-	93	55.746	ENSNBRG00000021157	zgc:123010	80	61.449	Neolamprologus_brichardi
ENSMAMG00000002460	-	86	57.618	ENSONIG00000018353	zgc:123010	73	57.618	Oreochromis_niloticus
ENSMAMG00000002460	-	73	35.906	ENSONIG00000012263	-	98	35.625	Oreochromis_niloticus
ENSMAMG00000002460	-	72	71.237	ENSONIG00000000297	-	100	71.237	Oreochromis_niloticus
ENSMAMG00000002460	-	56	44.118	ENSONIG00000007538	-	88	40.175	Oreochromis_niloticus
ENSMAMG00000002460	-	76	59.524	ENSORLG00000007675	zgc:123010	66	58.466	Oryzias_latipes
ENSMAMG00000002460	-	69	42.647	ENSORLG00000029651	si:dkey-33c12.4	52	33.016	Oryzias_latipes
ENSMAMG00000002460	-	68	37.557	ENSORLG00000030385	-	53	37.557	Oryzias_latipes
ENSMAMG00000002460	-	69	42.647	ENSORLG00020008750	si:dkey-33c12.4	50	31.105	Oryzias_latipes_hni
ENSMAMG00000002460	-	76	59.524	ENSORLG00020003457	zgc:123010	66	58.786	Oryzias_latipes_hni
ENSMAMG00000002460	-	86	61.003	ENSORLG00015008373	zgc:123010	69	61.003	Oryzias_latipes_hsok
ENSMAMG00000002460	-	72	31.195	ENSOMEG00000008913	-	50	32.070	Oryzias_melastigma
ENSMAMG00000002460	-	86	60.724	ENSOMEG00000003408	zgc:123010	69	61.003	Oryzias_melastigma
ENSMAMG00000002460	-	96	50.513	ENSPKIG00000015521	zgc:123010	79	57.382	Paramormyrops_kingsleyae
ENSMAMG00000002460	-	70	34.985	ENSPKIG00000011819	-	61	32.836	Paramormyrops_kingsleyae
ENSMAMG00000002460	-	86	54.755	ENSPMGG00000020251	zgc:123010	78	54.755	Periophthalmus_magnuspinnatus
ENSMAMG00000002460	-	71	42.606	ENSPMAG00000004544	zgc:123010	99	42.606	Petromyzon_marinus
ENSMAMG00000002460	-	55	41.593	ENSPMAG00000009352	-	89	38.889	Petromyzon_marinus
ENSMAMG00000002460	-	57	31.597	ENSPFOG00000017092	-	60	31.597	Poecilia_formosa
ENSMAMG00000002460	-	86	59.331	ENSPFOG00000001073	zgc:123010	69	59.331	Poecilia_formosa
ENSMAMG00000002460	-	86	59.331	ENSPLAG00000007711	zgc:123010	69	59.331	Poecilia_latipinna
ENSMAMG00000002460	-	86	59.331	ENSPMEG00000005092	zgc:123010	69	59.331	Poecilia_mexicana
ENSMAMG00000002460	-	96	55.013	ENSPREG00000019587	zgc:123010	80	58.286	Poecilia_reticulata
ENSMAMG00000002460	-	86	60.278	ENSPNYG00000007893	zgc:123010	70	60.278	Pundamilia_nyererei
ENSMAMG00000002460	-	96	61.429	ENSPNYG00000023304	-	99	61.429	Pundamilia_nyererei
ENSMAMG00000002460	-	86	62.712	ENSPNAG00000007579	zgc:123010	69	62.712	Pygocentrus_nattereri
ENSMAMG00000002460	-	84	31.296	ENSPNAG00000018386	si:dkey-33c12.4	63	31.296	Pygocentrus_nattereri
ENSMAMG00000002460	-	70	33.537	ENSSFOG00015009199	-	52	33.537	Scleropages_formosus
ENSMAMG00000002460	-	73	35.583	ENSSFOG00015005186	-	63	34.021	Scleropages_formosus
ENSMAMG00000002460	-	87	60.054	ENSSFOG00015021394	zgc:123010	76	60.054	Scleropages_formosus
ENSMAMG00000002460	-	86	61.281	ENSSMAG00000002904	zgc:123010	71	60.055	Scophthalmus_maximus
ENSMAMG00000002460	-	91	62.334	ENSSMAG00000021096	-	71	64.986	Scophthalmus_maximus
ENSMAMG00000002460	-	86	62.117	ENSSDUG00000008651	zgc:123010	69	62.117	Seriola_dumerili
ENSMAMG00000002460	-	68	33.962	ENSSDUG00000010976	-	56	33.962	Seriola_dumerili
ENSMAMG00000002460	-	86	72.727	ENSSDUG00000014026	-	71	72.727	Seriola_dumerili
ENSMAMG00000002460	-	86	62.117	ENSSLDG00000019386	zgc:123010	71	62.117	Seriola_lalandi_dorsalis
ENSMAMG00000002460	-	68	33.962	ENSSLDG00000012846	-	63	33.962	Seriola_lalandi_dorsalis
ENSMAMG00000002460	-	86	61.560	ENSSPAG00000013621	zgc:123010	69	61.560	Stegastes_partitus
ENSMAMG00000002460	-	72	32.665	ENSSPAG00000022577	-	51	32.665	Stegastes_partitus
ENSMAMG00000002460	-	86	57.703	ENSTRUG00000024824	zgc:123010	70	57.703	Takifugu_rubripes
ENSMAMG00000002460	-	77	55.657	ENSTNIG00000001303	zgc:123010	99	55.657	Tetraodon_nigroviridis
ENSMAMG00000002460	-	70	38.491	ENSTNIG00000010542	-	97	37.543	Tetraodon_nigroviridis
ENSMAMG00000002460	-	54	37.156	ENSTNIG00000001154	-	91	37.156	Tetraodon_nigroviridis
ENSMAMG00000002460	-	72	51.557	ENSXETG00000033896	-	99	51.557	Xenopus_tropicalis
ENSMAMG00000002460	-	96	55.224	ENSXCOG00000012281	zgc:123010	85	58.065	Xiphophorus_couchianus
ENSMAMG00000002460	-	86	59.889	ENSXMAG00000002598	zgc:123010	69	59.889	Xiphophorus_maculatus